Gene annotation
Transcriptome id Sobic.005G172700.1
Synonym Sb05g023236
Functional annotation expressed protein
UniProt A0A1Z5RK61
Pfam PF04780
Panther DB PTHR22975 PTHR22975:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47890 : Ubiquitin carboxyl-terminal hydrolase-related protein
RAP-DB (Rice) LOC_Os11g38330.3 : ZOS11-06 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G238800 mago nashi, putative, expressed K12877: protein mago nashi
2 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
3 Sobic.008G180400 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
4 Sobic.001G081800 GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
5 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -
6 Sobic.004G218000 SET domain containing protein, expressed -
7 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
8 Sobic.001G137400 ankyrin, putative, expressed -
9 Sobic.007G056900 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
10 Sobic.002G112000 protein binding protein, putative, expressed -
11 Sobic.003G379900 plus-3 domain containing protein, putative, expressed -
12 Sobic.001G457600 piwi domain containing protein, expressed -
13 Sobic.003G317700 cyclic nucleotide-gated ion channel 2, putative, expressed -
14 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
15 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
16 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
17 Sobic.002G053350 - -
18 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
19 Sobic.001G171200 expressed protein -
20 Sobic.004G220200 expressed protein -


Gene co-expression network
sample Sobic005G172700 Sobic005G172700 Sobic002G238800 Sobic002G238800 Sobic005G172700--Sobic002G238800 Sobic003G289700 Sobic003G289700 Sobic005G172700--Sobic003G289700 Sobic008G180400 Sobic008G180400 Sobic005G172700--Sobic008G180400 Sobic001G081800 Sobic001G081800 Sobic005G172700--Sobic001G081800 Sobic005G164800 Sobic005G164800 Sobic005G172700--Sobic005G164800 Sobic004G218000 Sobic004G218000 Sobic005G172700--Sobic004G218000 Sobic003G343200 Sobic003G343200 Sobic005G172700--Sobic003G343200 Sobic001G137400 Sobic001G137400 Sobic005G172700--Sobic001G137400 Sobic007G056900 Sobic007G056900 Sobic005G172700--Sobic007G056900 Sobic003G379900 Sobic003G379900 Sobic002G238800--Sobic003G379900 Sobic002G238800--Sobic001G081800 Sobic002G238800--Sobic005G172700 Sobic001G506300 Sobic001G506300 Sobic002G238800--Sobic001G506300 Sobic003G042200 Sobic003G042200 Sobic002G238800--Sobic003G042200 Sobic010G087100 Sobic010G087100 Sobic002G238800--Sobic010G087100 Sobic002G238800--Sobic004G218000 Sobic002G354800 Sobic002G354800 Sobic002G238800--Sobic002G354800 Sobic002G349000 Sobic002G349000 Sobic002G238800--Sobic002G349000 Sobic003G289700--Sobic005G172700 Sobic003G289700--Sobic003G343200 Sobic010G222800 Sobic010G222800 Sobic003G289700--Sobic010G222800 Sobic010G237800 Sobic010G237800 Sobic003G289700--Sobic010G237800 Sobic003G320100 Sobic003G320100 Sobic003G289700--Sobic003G320100 Sobic006G106200 Sobic006G106200 Sobic003G289700--Sobic006G106200 Sobic009G138300 Sobic009G138300 Sobic003G289700--Sobic009G138300 Sobic010G243100 Sobic010G243100 Sobic003G289700--Sobic010G243100 Sobic005G160200 Sobic005G160200 Sobic003G289700--Sobic005G160200 Sobic003G423800 Sobic003G423800 Sobic008G180400--Sobic003G423800 Sobic008G180400--Sobic005G172700 Sobic008G180200 Sobic008G180200 Sobic008G180400--Sobic008G180200 Sobic003G091300 Sobic003G091300 Sobic008G180400--Sobic003G091300 Sobic001G457600 Sobic001G457600 Sobic008G180400--Sobic001G457600 Sobic002G258000 Sobic002G258000 Sobic008G180400--Sobic002G258000 Sobic008G180400--Sobic010G243100 Sobic008G180400--Sobic003G289700 Sobic002G112000 Sobic002G112000 Sobic008G180400--Sobic002G112000 Sobic001G081800--Sobic002G238800 Sobic006G143300 Sobic006G143300 Sobic001G081800--Sobic006G143300 Sobic002G335500 Sobic002G335500 Sobic001G081800--Sobic002G335500 Sobic001G081800--Sobic002G354800 Sobic001G081800--Sobic005G164800 Sobic002G343000 Sobic002G343000 Sobic001G081800--Sobic002G343000 Sobic001G171100 Sobic001G171100 Sobic001G081800--Sobic001G171100 Sobic005G033700 Sobic005G033700 Sobic001G081800--Sobic005G033700 Sobic001G081800--Sobic003G379900 Sobic003G217300 Sobic003G217300 Sobic005G164800--Sobic003G217300 Sobic005G164800--Sobic004G218000 Sobic005G164800--Sobic001G171100 Sobic001G377600 Sobic001G377600 Sobic005G164800--Sobic001G377600 Sobic010G067200 Sobic010G067200 Sobic005G164800--Sobic010G067200 Sobic003G027200 Sobic003G027200 Sobic005G164800--Sobic003G027200 Sobic007G193300 Sobic007G193300 Sobic005G164800--Sobic007G193300 Sobic008G072900 Sobic008G072900 Sobic005G164800--Sobic008G072900 Sobic007G191200 Sobic007G191200 Sobic005G164800--Sobic007G191200 Sobic004G218000--Sobic003G217300 Sobic004G218000--Sobic007G056900 Sobic004G218000--Sobic005G164800 Sobic004G218000--Sobic002G349000 Sobic002G221100 Sobic002G221100 Sobic004G218000--Sobic002G221100 Sobic005G041900 Sobic005G041900 Sobic004G218000--Sobic005G041900 Sobic003G022900 Sobic003G022900 Sobic004G218000--Sobic003G022900 Sobic009G042600 Sobic009G042600 Sobic004G218000--Sobic009G042600 Sobic010G180200 Sobic010G180200 Sobic004G218000--Sobic010G180200 Sobic003G343200--Sobic010G222800 Sobic010G257500 Sobic010G257500 Sobic003G343200--Sobic010G257500 Sobic002G271400 Sobic002G271400 Sobic003G343200--Sobic002G271400 Sobic001G534400 Sobic001G534400 Sobic003G343200--Sobic001G534400 Sobic003G411700 Sobic003G411700 Sobic003G343200--Sobic003G411700 Sobic004G014100 Sobic004G014100 Sobic003G343200--Sobic004G014100 Sobic003G343200--Sobic003G289700 Sobic004G306100 Sobic004G306100 Sobic003G343200--Sobic004G306100 Sobic010G024000 Sobic010G024000 Sobic003G343200--Sobic010G024000 Sobic001G137500 Sobic001G137500 Sobic001G137400--Sobic001G137500 Sobic001G137400--Sobic002G258000 Sobic001G137400--Sobic007G193300 Sobic001G137400--Sobic001G457600 Sobic010G194600 Sobic010G194600 Sobic001G137400--Sobic010G194600 Sobic001G288000 Sobic001G288000 Sobic001G137400--Sobic001G288000 Sobic009G243000 Sobic009G243000 Sobic001G137400--Sobic009G243000 Sobic001G086400 Sobic001G086400 Sobic001G137400--Sobic001G086400 Sobic001G419500 Sobic001G419500 Sobic001G137400--Sobic001G419500 Sobic007G056900--Sobic004G218000 Sobic007G056900--Sobic005G164800 Sobic007G056900--Sobic003G217300 Sobic002G061800 Sobic002G061800 Sobic007G056900--Sobic002G061800 Sobic007G056900--Sobic006G143300 Sobic007G056900--Sobic005G041900 Sobic001G132200 Sobic001G132200 Sobic007G056900--Sobic001G132200 Sobic007G056900--Sobic009G042600 Sobic006G062600 Sobic006G062600 Sobic007G056900--Sobic006G062600
Octagon: transcription factors


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