Gene annotation
Transcriptome id Sobic.004G220200.2,Sobic.004G220200.1,Sobic.004G220200.3
Synonym
Functional annotation expressed protein
UniProt A0A194YR47
Pfam -
Panther DB PTHR35116 PTHR35116:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g41610.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G171200 expressed protein -
2 Sobic.001G137400 ankyrin, putative, expressed -
3 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
4 Sobic.004G234600 expressed protein -
5 Sobic.001G086400 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed -
6 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -
7 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
8 Sobic.002G053350 - -
9 Sobic.001G137600 ankyrin, putative, expressed -
10 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
11 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
12 Sobic.001G457600 piwi domain containing protein, expressed -
13 Sobic.004G149400 ankyrin, putative, expressed -
14 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
15 Sobic.003G088600 transcription factor X1, putative, expressed -
16 Sobic.002G112000 protein binding protein, putative, expressed -
17 Sobic.001G137500 ankyrin, putative, expressed -
18 Sobic.002G263000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
19 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
20 Sobic.006G097300 F-box protein FBW2, putative, expressed -


Gene co-expression network
sample Sobic004G220200 Sobic004G220200 Sobic001G171200 Sobic001G171200 Sobic004G220200--Sobic001G171200 Sobic001G137400 Sobic001G137400 Sobic004G220200--Sobic001G137400 Sobic009G243000 Sobic009G243000 Sobic004G220200--Sobic009G243000 Sobic004G234600 Sobic004G234600 Sobic004G220200--Sobic004G234600 Sobic001G086400 Sobic001G086400 Sobic004G220200--Sobic001G086400 Sobic010G194600 Sobic010G194600 Sobic004G220200--Sobic010G194600 Sobic006G163300 Sobic006G163300 Sobic004G220200--Sobic006G163300 Sobic002G053350 Sobic002G053350 Sobic004G220200--Sobic002G053350 Sobic001G137600 Sobic001G137600 Sobic004G220200--Sobic001G137600 Sobic001G171200--Sobic004G220200 Sobic006G097300 Sobic006G097300 Sobic001G171200--Sobic006G097300 Sobic007G128200 Sobic007G128200 Sobic001G171200--Sobic007G128200 Sobic001G171200--Sobic004G234600 Sobic002G121900 Sobic002G121900 Sobic001G171200--Sobic002G121900 Sobic007G193300 Sobic007G193300 Sobic001G171200--Sobic007G193300 Sobic001G171200--Sobic010G194600 Sobic001G171200--Sobic001G086400 Sobic001G457600 Sobic001G457600 Sobic001G171200--Sobic001G457600 Sobic001G137500 Sobic001G137500 Sobic001G137400--Sobic001G137500 Sobic002G258000 Sobic002G258000 Sobic001G137400--Sobic002G258000 Sobic001G137400--Sobic007G193300 Sobic001G137400--Sobic001G457600 Sobic001G137400--Sobic010G194600 Sobic001G288000 Sobic001G288000 Sobic001G137400--Sobic001G288000 Sobic001G137400--Sobic009G243000 Sobic001G137400--Sobic001G086400 Sobic001G419500 Sobic001G419500 Sobic001G137400--Sobic001G419500 Sobic007G033700 Sobic007G033700 Sobic009G243000--Sobic007G033700 Sobic002G078900 Sobic002G078900 Sobic009G243000--Sobic002G078900 Sobic006G271600 Sobic006G271600 Sobic009G243000--Sobic006G271600 Sobic001G071600 Sobic001G071600 Sobic009G243000--Sobic001G071600 Sobic002G205000 Sobic002G205000 Sobic009G243000--Sobic002G205000 Sobic003G006000 Sobic003G006000 Sobic009G243000--Sobic003G006000 Sobic003G046400 Sobic003G046400 Sobic009G243000--Sobic003G046400 Sobic009G243000--Sobic001G137600 Sobic009G243000--Sobic002G258000 Sobic004G234600--Sobic007G128200 Sobic001G216400 Sobic001G216400 Sobic004G234600--Sobic001G216400 Sobic009G063700 Sobic009G063700 Sobic004G234600--Sobic009G063700 Sobic004G234600--Sobic002G053350 Sobic004G234600--Sobic001G457600 Sobic004G234600--Sobic001G419500 Sobic004G234600--Sobic010G194600 Sobic001G158100 Sobic001G158100 Sobic004G234600--Sobic001G158100 Sobic010G183800 Sobic010G183800 Sobic004G234600--Sobic010G183800 Sobic002G263000 Sobic002G263000 Sobic001G086400--Sobic002G263000 Sobic003G207000 Sobic003G207000 Sobic001G086400--Sobic003G207000 Sobic001G137800 Sobic001G137800 Sobic001G086400--Sobic001G137800 Sobic001G086400--Sobic010G194600 Sobic001G086400--Sobic001G137400 Sobic001G086400--Sobic002G121900 Sobic001G086400--Sobic002G053350 Sobic001G086400--Sobic007G128200 Sobic001G086400--Sobic001G171200 Sobic010G194600--Sobic001G457600 Sobic010G194600--Sobic006G271600 Sobic010G194600--Sobic007G128200 Sobic010G194600--Sobic001G137500 Sobic010G194600--Sobic001G419500 Sobic003G088600 Sobic003G088600 Sobic010G194600--Sobic003G088600 Sobic010G194600--Sobic004G234600 Sobic010G194600--Sobic009G063700 Sobic003G300000 Sobic003G300000 Sobic010G194600--Sobic003G300000 Sobic002G360600 Sobic002G360600 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic010G070900 Sobic010G070900 Sobic006G163300--Sobic010G070900 Sobic007G147200 Sobic007G147200 Sobic006G163300--Sobic007G147200 Sobic006G163300--Sobic007G033700 Sobic006G107500 Sobic006G107500 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic002G053350--Sobic004G234600 Sobic002G053350--Sobic003G088600 Sobic008G137700 Sobic008G137700 Sobic002G053350--Sobic008G137700 Sobic002G053350--Sobic007G128200 Sobic002G053350--Sobic001G216400 Sobic002G053350--Sobic001G419500 Sobic002G053350--Sobic010G194600 Sobic002G053350--Sobic007G193300 Sobic002G053350--Sobic001G137500 Sobic001G137600--Sobic007G033700 Sobic001G137600--Sobic006G271600 Sobic001G137600--Sobic009G243000 Sobic001G137600--Sobic003G046400 Sobic001G137600--Sobic001G455900 Sobic003G117200 Sobic003G117200 Sobic001G137600--Sobic003G117200 Sobic001G137600--Sobic006G163300 Sobic001G137600--Sobic001G071600 Sobic001G137600--Sobic010G194600
Octagon: transcription factors


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