Gene annotation
Transcriptome id Sobic.010G030000.1
Synonym Sb10g002735
Functional annotation leucine rich repeat protein, putative, expressed
UniProt A0A194YH30
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27004 PTHR27004:SF27
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34930 : disease resistance family protein / LRR family protein
RAP-DB (Rice) LOC_Os06g04830.1 : leucine rich repeat protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
2 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
3 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
4 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
5 Sobic.010G243100 RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
6 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
7 Sobic.003G216600 BAH domain containing protein, expressed -
8 Sobic.001G486600 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
9 Sobic.010G222800 expressed protein -
10 Sobic.002G173400 expressed protein -
11 Sobic.003G320100 pentatricopeptide containing protein, putative, expressed -
12 Sobic.006G106600 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
13 Sobic.009G138300 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
14 Sobic.008G180200 expressed protein -
15 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
16 Sobic.001G248400 expressed protein -
17 Sobic.003G013800 expressed protein -
18 Sobic.009G125800 expressed protein -
19 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
20 Sobic.005G060100 growth regulator related protein, putative, expressed -


Gene co-expression network
sample Sobic010G030000 Sobic010G030000 Sobic010G038200 Sobic010G038200 Sobic010G030000--Sobic010G038200 Sobic009G136000 Sobic009G136000 Sobic010G030000--Sobic009G136000 Sobic008G131900 Sobic008G131900 Sobic010G030000--Sobic008G131900 Sobic010G009700 Sobic010G009700 Sobic010G030000--Sobic010G009700 Sobic010G243100 Sobic010G243100 Sobic010G030000--Sobic010G243100 Sobic005G210500 Sobic005G210500 Sobic010G030000--Sobic005G210500 Sobic003G216600 Sobic003G216600 Sobic010G030000--Sobic003G216600 Sobic001G486600 Sobic001G486600 Sobic010G030000--Sobic001G486600 Sobic010G222800 Sobic010G222800 Sobic010G030000--Sobic010G222800 Sobic010G038200--Sobic009G136000 Sobic010G038200--Sobic010G030000 Sobic010G038200--Sobic010G009700 Sobic010G038200--Sobic008G131900 Sobic001G248400 Sobic001G248400 Sobic010G038200--Sobic001G248400 Sobic005G060100 Sobic005G060100 Sobic010G038200--Sobic005G060100 Sobic009G214500 Sobic009G214500 Sobic010G038200--Sobic009G214500 Sobic010G038200--Sobic003G216600 Sobic002G052800 Sobic002G052800 Sobic010G038200--Sobic002G052800 Sobic009G136000--Sobic010G038200 Sobic001G082800 Sobic001G082800 Sobic009G136000--Sobic001G082800 Sobic009G125800 Sobic009G125800 Sobic009G136000--Sobic009G125800 Sobic009G136000--Sobic008G131900 Sobic009G136000--Sobic010G030000 Sobic006G193100 Sobic006G193100 Sobic009G136000--Sobic006G193100 Sobic002G390800 Sobic002G390800 Sobic009G136000--Sobic002G390800 Sobic009G131200 Sobic009G131200 Sobic009G136000--Sobic009G131200 Sobic009G136000--Sobic002G052800 Sobic002G173400 Sobic002G173400 Sobic008G131900--Sobic002G173400 Sobic008G131900--Sobic010G038200 Sobic008G131900--Sobic009G136000 Sobic010G024000 Sobic010G024000 Sobic008G131900--Sobic010G024000 Sobic008G131900--Sobic010G030000 Sobic008G131900--Sobic001G486600 Sobic008G131900--Sobic002G052800 Sobic008G131900--Sobic010G222800 Sobic008G131900--Sobic006G193100 Sobic004G298600 Sobic004G298600 Sobic010G009700--Sobic004G298600 Sobic001G131900 Sobic001G131900 Sobic010G009700--Sobic001G131900 Sobic010G009700--Sobic010G038200 Sobic006G189000 Sobic006G189000 Sobic010G009700--Sobic006G189000 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic002G322700 Sobic002G322700 Sobic010G009700--Sobic002G322700 Sobic002G151500 Sobic002G151500 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic009G138300 Sobic009G138300 Sobic010G243100--Sobic009G138300 Sobic010G243100--Sobic010G030000 Sobic010G243100--Sobic010G009700 Sobic001G500500 Sobic001G500500 Sobic010G243100--Sobic001G500500 Sobic003G289700 Sobic003G289700 Sobic010G243100--Sobic003G289700 Sobic008G180400 Sobic008G180400 Sobic010G243100--Sobic008G180400 Sobic010G243100--Sobic009G136000 Sobic001G288000 Sobic001G288000 Sobic010G243100--Sobic001G288000 Sobic010G243100--Sobic010G222800 Sobic003G418400 Sobic003G418400 Sobic005G210500--Sobic003G418400 Sobic005G210500--Sobic001G486600 Sobic005G210500--Sobic009G214500 Sobic005G210500--Sobic010G038200 Sobic001G117900 Sobic001G117900 Sobic005G210500--Sobic001G117900 Sobic003G005500 Sobic003G005500 Sobic005G210500--Sobic003G005500 Sobic010G252200 Sobic010G252200 Sobic005G210500--Sobic010G252200 Sobic005G210500--Sobic007G102300 Sobic005G210500--Sobic010G030000 Sobic003G216600--Sobic005G060100 Sobic003G216600--Sobic007G102300 Sobic003G216600--Sobic010G038200 Sobic003G216600--Sobic010G009700 Sobic003G216600--Sobic004G298600 Sobic003G216600--Sobic001G248400 Sobic003G216600--Sobic009G214500 Sobic003G216600--Sobic010G030000 Sobic008G047500 Sobic008G047500 Sobic003G216600--Sobic008G047500 Sobic001G486600--Sobic005G210500 Sobic001G486600--Sobic008G131900 Sobic001G486600--Sobic010G038200 Sobic001G486600--Sobic002G173400 Sobic006G119300 Sobic006G119300 Sobic001G486600--Sobic006G119300 Sobic001G486600--Sobic008G047500 Sobic001G486600--Sobic010G030000 Sobic001G486600--Sobic010G252200 Sobic003G204100 Sobic003G204100 Sobic001G486600--Sobic003G204100 Sobic003G343200 Sobic003G343200 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic003G411700 Sobic003G411700 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic008G070700 Sobic008G070700 Sobic010G222800--Sobic008G070700 Sobic002G271400 Sobic002G271400 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic010G222800--Sobic008G131900
Octagon: transcription factors


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