Gene annotation
Transcriptome id Sobic.001G248400.3,Sobic.001G248400.4,Sobic.001G248400.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6QKS8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g28009.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G248400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
2 Sobic.008G104000 cyclin, putative, expressed K06627: cyclin-A
3 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
4 Sobic.001G126800 WD domain, G-beta repeat domain containing protein, expressed K11790: DTL, CDT2, denticleless
5 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
6 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
7 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
8 Sobic.004G213400 ATP8, putative, expressed -
9 Sobic.002G390800 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
10 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
11 Sobic.009G080600 expressed protein -
12 Sobic.007G102000 formin-like protein 13, putative, expressed -
13 Sobic.001G082800 ORC5 - Putative origin recognition complex subunit 5, expressed K02607: origin recognition complex subunit 5
14 Sobic.002G322700 expressed protein -
15 Sobic.003G216600 BAH domain containing protein, expressed -
16 Sobic.002G192900 expressed protein -
17 Sobic.007G111300 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
18 Sobic.005G060100 growth regulator related protein, putative, expressed -
19 Sobic.008G047500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase


Gene co-expression network
sample Sobic001G248400 Sobic001G248400 Sobic010G038200 Sobic010G038200 Sobic001G248400--Sobic010G038200 Sobic008G104000 Sobic008G104000 Sobic001G248400--Sobic008G104000 Sobic008G004900 Sobic008G004900 Sobic001G248400--Sobic008G004900 Sobic001G126800 Sobic001G126800 Sobic001G248400--Sobic001G126800 Sobic002G308000 Sobic002G308000 Sobic001G248400--Sobic002G308000 Sobic003G423700 Sobic003G423700 Sobic001G248400--Sobic003G423700 Sobic010G009700 Sobic010G009700 Sobic001G248400--Sobic010G009700 Sobic004G213400 Sobic004G213400 Sobic001G248400--Sobic004G213400 Sobic002G390800 Sobic002G390800 Sobic001G248400--Sobic002G390800 Sobic009G136000 Sobic009G136000 Sobic010G038200--Sobic009G136000 Sobic010G030000 Sobic010G030000 Sobic010G038200--Sobic010G030000 Sobic010G038200--Sobic010G009700 Sobic008G131900 Sobic008G131900 Sobic010G038200--Sobic008G131900 Sobic010G038200--Sobic001G248400 Sobic005G060100 Sobic005G060100 Sobic010G038200--Sobic005G060100 Sobic009G214500 Sobic009G214500 Sobic010G038200--Sobic009G214500 Sobic003G216600 Sobic003G216600 Sobic010G038200--Sobic003G216600 Sobic002G052800 Sobic002G052800 Sobic010G038200--Sobic002G052800 Sobic008G104000--Sobic003G423700 Sobic004G241300 Sobic004G241300 Sobic008G104000--Sobic004G241300 Sobic010G253200 Sobic010G253200 Sobic008G104000--Sobic010G253200 Sobic010G182000 Sobic010G182000 Sobic008G104000--Sobic010G182000 Sobic002G420100 Sobic002G420100 Sobic008G104000--Sobic002G420100 Sobic008G104000--Sobic001G126800 Sobic008G104000--Sobic001G248400 Sobic008G156600 Sobic008G156600 Sobic008G104000--Sobic008G156600 Sobic008G171900 Sobic008G171900 Sobic008G104000--Sobic008G171900 Sobic008G004900--Sobic001G248400 Sobic001G082800 Sobic001G082800 Sobic008G004900--Sobic001G082800 Sobic009G131200 Sobic009G131200 Sobic008G004900--Sobic009G131200 Sobic008G004900--Sobic002G390800 Sobic008G004900--Sobic010G038200 Sobic008G004900--Sobic002G308000 Sobic002G271400 Sobic002G271400 Sobic008G004900--Sobic002G271400 Sobic002G113400 Sobic002G113400 Sobic008G004900--Sobic002G113400 Sobic008G004900--Sobic009G136000 Sobic001G126800--Sobic003G423700 Sobic001G126800--Sobic004G241300 Sobic001G126800--Sobic008G104000 Sobic001G126800--Sobic002G420100 Sobic001G126800--Sobic001G248400 Sobic001G126800--Sobic010G182000 Sobic002G186200 Sobic002G186200 Sobic001G126800--Sobic002G186200 Sobic001G126800--Sobic009G214500 Sobic001G126800--Sobic010G253200 Sobic002G392400 Sobic002G392400 Sobic002G308000--Sobic002G392400 Sobic007G105700 Sobic007G105700 Sobic002G308000--Sobic007G105700 Sobic001G117900 Sobic001G117900 Sobic002G308000--Sobic001G117900 Sobic001G433600 Sobic001G433600 Sobic002G308000--Sobic001G433600 Sobic003G293400 Sobic003G293400 Sobic002G308000--Sobic003G293400 Sobic002G308000--Sobic010G253200 Sobic001G131900 Sobic001G131900 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G192900 Sobic002G192900 Sobic002G308000--Sobic002G192900 Sobic003G423700--Sobic001G126800 Sobic003G423700--Sobic004G241300 Sobic003G423700--Sobic008G104000 Sobic003G423700--Sobic008G156600 Sobic003G423700--Sobic002G420100 Sobic009G163100 Sobic009G163100 Sobic003G423700--Sobic009G163100 Sobic003G423700--Sobic010G182000 Sobic003G423700--Sobic008G171900 Sobic003G423700--Sobic010G253200 Sobic004G298600 Sobic004G298600 Sobic010G009700--Sobic004G298600 Sobic010G009700--Sobic001G131900 Sobic010G009700--Sobic010G038200 Sobic006G189000 Sobic006G189000 Sobic010G009700--Sobic006G189000 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic002G322700 Sobic002G322700 Sobic010G009700--Sobic002G322700 Sobic002G151500 Sobic002G151500 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic002G239400 Sobic002G239400 Sobic004G213400--Sobic002G239400 Sobic005G110547 Sobic005G110547 Sobic004G213400--Sobic005G110547 Sobic004G213400--Sobic004G298600 Sobic004G213400--Sobic003G293400 Sobic004G213400--Sobic001G248400 Sobic004G213400--Sobic001G131900 Sobic009G220700 Sobic009G220700 Sobic004G213400--Sobic009G220700 Sobic004G213400--Sobic002G308000 Sobic004G213400--Sobic007G105700 Sobic002G390800--Sobic001G082800 Sobic007G102000 Sobic007G102000 Sobic002G390800--Sobic007G102000 Sobic009G125800 Sobic009G125800 Sobic002G390800--Sobic009G125800 Sobic008G047500 Sobic008G047500 Sobic002G390800--Sobic008G047500 Sobic002G390800--Sobic002G192900 Sobic002G390800--Sobic009G136000 Sobic002G390800--Sobic008G004900 Sobic002G390800--Sobic001G248400 Sobic002G390800--Sobic010G038200
Octagon: transcription factors


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