Gene annotation
Transcriptome id Sobic.010G038200.1
Synonym ATCDT1A, CDT1, CDT1A, Sb10g003390
Functional annotation CDT1A - Putative DNA replication initiation protein, expressed
UniProt C5Z3Z5
Pfam PF08839 PF16679
Panther DB PTHR28637 PTHR28637:SF1
NCBI CDD KOG4762; DNA replication factor
KEGG Orthology K10727; chromatin licensing and DNA replication factor 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31270 : homolog of yeast CDT1 A
RAP-DB (Rice) LOC_Os04g10650.1 : CDT1A - Putative DNA replication initiation protein, expressed
MaizeGDB (Corn) Zm00025a050033
Brachypodium KQJ81479
Barley -
Wheat TraesCS2D02G023000
Populus -


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cDNA sequences
Sobic.010G038200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
2 Sobic.010G030000 leucine rich repeat protein, putative, expressed -
3 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
4 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
5 Sobic.001G248400 expressed protein -
6 Sobic.005G060100 growth regulator related protein, putative, expressed -
7 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
8 Sobic.003G216600 BAH domain containing protein, expressed -
9 Sobic.002G052800 FAR1 family protein, expressed -
10 Sobic.007G102300 formin, putative, expressed -
11 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
12 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
13 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
14 Sobic.001G126800 WD domain, G-beta repeat domain containing protein, expressed K11790: DTL, CDT2, denticleless
15 Sobic.002G390800 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
16 Sobic.002G173400 expressed protein -
17 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
18 Sobic.008G104000 cyclin, putative, expressed K06627: cyclin-A
19 Sobic.008G047500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81


Gene co-expression network
sample Sobic010G038200 Sobic010G038200 Sobic009G136000 Sobic009G136000 Sobic010G038200--Sobic009G136000 Sobic010G030000 Sobic010G030000 Sobic010G038200--Sobic010G030000 Sobic010G009700 Sobic010G009700 Sobic010G038200--Sobic010G009700 Sobic008G131900 Sobic008G131900 Sobic010G038200--Sobic008G131900 Sobic001G248400 Sobic001G248400 Sobic010G038200--Sobic001G248400 Sobic005G060100 Sobic005G060100 Sobic010G038200--Sobic005G060100 Sobic009G214500 Sobic009G214500 Sobic010G038200--Sobic009G214500 Sobic003G216600 Sobic003G216600 Sobic010G038200--Sobic003G216600 Sobic002G052800 Sobic002G052800 Sobic010G038200--Sobic002G052800 Sobic009G136000--Sobic010G038200 Sobic001G082800 Sobic001G082800 Sobic009G136000--Sobic001G082800 Sobic009G125800 Sobic009G125800 Sobic009G136000--Sobic009G125800 Sobic009G136000--Sobic008G131900 Sobic009G136000--Sobic010G030000 Sobic006G193100 Sobic006G193100 Sobic009G136000--Sobic006G193100 Sobic002G390800 Sobic002G390800 Sobic009G136000--Sobic002G390800 Sobic009G131200 Sobic009G131200 Sobic009G136000--Sobic009G131200 Sobic009G136000--Sobic002G052800 Sobic010G030000--Sobic010G038200 Sobic010G030000--Sobic009G136000 Sobic010G030000--Sobic008G131900 Sobic010G030000--Sobic010G009700 Sobic010G243100 Sobic010G243100 Sobic010G030000--Sobic010G243100 Sobic005G210500 Sobic005G210500 Sobic010G030000--Sobic005G210500 Sobic010G030000--Sobic003G216600 Sobic001G486600 Sobic001G486600 Sobic010G030000--Sobic001G486600 Sobic010G222800 Sobic010G222800 Sobic010G030000--Sobic010G222800 Sobic004G298600 Sobic004G298600 Sobic010G009700--Sobic004G298600 Sobic001G131900 Sobic001G131900 Sobic010G009700--Sobic001G131900 Sobic010G009700--Sobic010G038200 Sobic006G189000 Sobic006G189000 Sobic010G009700--Sobic006G189000 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic002G322700 Sobic002G322700 Sobic010G009700--Sobic002G322700 Sobic002G151500 Sobic002G151500 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic002G173400 Sobic002G173400 Sobic008G131900--Sobic002G173400 Sobic008G131900--Sobic010G038200 Sobic008G131900--Sobic009G136000 Sobic010G024000 Sobic010G024000 Sobic008G131900--Sobic010G024000 Sobic008G131900--Sobic010G030000 Sobic008G131900--Sobic001G486600 Sobic008G131900--Sobic002G052800 Sobic008G131900--Sobic010G222800 Sobic008G131900--Sobic006G193100 Sobic001G248400--Sobic010G038200 Sobic008G104000 Sobic008G104000 Sobic001G248400--Sobic008G104000 Sobic008G004900 Sobic008G004900 Sobic001G248400--Sobic008G004900 Sobic001G126800 Sobic001G126800 Sobic001G248400--Sobic001G126800 Sobic002G308000 Sobic002G308000 Sobic001G248400--Sobic002G308000 Sobic003G423700 Sobic003G423700 Sobic001G248400--Sobic003G423700 Sobic001G248400--Sobic010G009700 Sobic004G213400 Sobic004G213400 Sobic001G248400--Sobic004G213400 Sobic001G248400--Sobic002G390800 Sobic007G105700 Sobic007G105700 Sobic005G060100--Sobic007G105700 Sobic005G060100--Sobic007G102300 Sobic001G385300 Sobic001G385300 Sobic005G060100--Sobic001G385300 Sobic005G060100--Sobic003G216600 Sobic001G433600 Sobic001G433600 Sobic005G060100--Sobic001G433600 Sobic005G060100--Sobic004G298600 Sobic001G117900 Sobic001G117900 Sobic005G060100--Sobic001G117900 Sobic003G352900 Sobic003G352900 Sobic005G060100--Sobic003G352900 Sobic005G060100--Sobic001G131900 Sobic009G214500--Sobic007G102300 Sobic009G214500--Sobic001G385300 Sobic007G102000 Sobic007G102000 Sobic009G214500--Sobic007G102000 Sobic009G163100 Sobic009G163100 Sobic009G214500--Sobic009G163100 Sobic001G327100 Sobic001G327100 Sobic009G214500--Sobic001G327100 Sobic001G380700 Sobic001G380700 Sobic009G214500--Sobic001G380700 Sobic003G376900 Sobic003G376900 Sobic009G214500--Sobic003G376900 Sobic004G241300 Sobic004G241300 Sobic009G214500--Sobic004G241300 Sobic009G214500--Sobic003G423700 Sobic003G216600--Sobic005G060100 Sobic003G216600--Sobic007G102300 Sobic003G216600--Sobic010G038200 Sobic003G216600--Sobic010G009700 Sobic003G216600--Sobic004G298600 Sobic003G216600--Sobic001G248400 Sobic003G216600--Sobic009G214500 Sobic003G216600--Sobic010G030000 Sobic008G047500 Sobic008G047500 Sobic003G216600--Sobic008G047500 Sobic002G052800--Sobic010G038200 Sobic002G052800--Sobic010G009700 Sobic002G052800--Sobic009G136000 Sobic002G052800--Sobic002G173400 Sobic002G052800--Sobic005G060100 Sobic008G140600 Sobic008G140600 Sobic002G052800--Sobic008G140600 Sobic002G052800--Sobic008G131900 Sobic003G301800 Sobic003G301800 Sobic002G052800--Sobic003G301800 Sobic009G168100 Sobic009G168100 Sobic002G052800--Sobic009G168100
Octagon: transcription factors


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