Gene annotation
Transcriptome id Sobic.002G052800.1,Sobic.002G052800.2
Synonym Sb02g004433, FRS5
Functional annotation FAR1 family protein, expressed
UniProt A0A1W0W2D7 , A0A1W0W2F3
Pfam PF03101 PF10551
Panther DB PTHR31669 PTHR31669:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os06g42420.1,LOC_Os04g28580.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
2 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
3 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
4 Sobic.002G173400 expressed protein -
5 Sobic.005G060100 growth regulator related protein, putative, expressed -
6 Sobic.008G140600 targeting protein for Xklp2 containing protein, expressed -
7 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
8 Sobic.003G301800 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
9 Sobic.009G168100 expressed protein -
10 Sobic.002G390800 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
11 Sobic.009G125800 expressed protein -
12 Sobic.008G047500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.007G102000 formin-like protein 13, putative, expressed -
14 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
15 Sobic.008G073500 AAA-type ATPase family protein, putative, expressed -
16 Sobic.008G085950 - -
17 Sobic.002G151500 R-interacting factor 1, putative, expressed -
18 Sobic.002G322700 expressed protein -
19 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
20 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -


Gene co-expression network
sample Sobic002G052800 Sobic002G052800 Sobic010G038200 Sobic010G038200 Sobic002G052800--Sobic010G038200 Sobic010G009700 Sobic010G009700 Sobic002G052800--Sobic010G009700 Sobic009G136000 Sobic009G136000 Sobic002G052800--Sobic009G136000 Sobic002G173400 Sobic002G173400 Sobic002G052800--Sobic002G173400 Sobic005G060100 Sobic005G060100 Sobic002G052800--Sobic005G060100 Sobic008G140600 Sobic008G140600 Sobic002G052800--Sobic008G140600 Sobic008G131900 Sobic008G131900 Sobic002G052800--Sobic008G131900 Sobic003G301800 Sobic003G301800 Sobic002G052800--Sobic003G301800 Sobic009G168100 Sobic009G168100 Sobic002G052800--Sobic009G168100 Sobic010G038200--Sobic009G136000 Sobic010G030000 Sobic010G030000 Sobic010G038200--Sobic010G030000 Sobic010G038200--Sobic010G009700 Sobic010G038200--Sobic008G131900 Sobic001G248400 Sobic001G248400 Sobic010G038200--Sobic001G248400 Sobic010G038200--Sobic005G060100 Sobic009G214500 Sobic009G214500 Sobic010G038200--Sobic009G214500 Sobic003G216600 Sobic003G216600 Sobic010G038200--Sobic003G216600 Sobic010G038200--Sobic002G052800 Sobic004G298600 Sobic004G298600 Sobic010G009700--Sobic004G298600 Sobic001G131900 Sobic001G131900 Sobic010G009700--Sobic001G131900 Sobic010G009700--Sobic010G038200 Sobic006G189000 Sobic006G189000 Sobic010G009700--Sobic006G189000 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic002G322700 Sobic002G322700 Sobic010G009700--Sobic002G322700 Sobic002G151500 Sobic002G151500 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic009G136000--Sobic010G038200 Sobic001G082800 Sobic001G082800 Sobic009G136000--Sobic001G082800 Sobic009G125800 Sobic009G125800 Sobic009G136000--Sobic009G125800 Sobic009G136000--Sobic008G131900 Sobic009G136000--Sobic010G030000 Sobic006G193100 Sobic006G193100 Sobic009G136000--Sobic006G193100 Sobic002G390800 Sobic002G390800 Sobic009G136000--Sobic002G390800 Sobic009G131200 Sobic009G131200 Sobic009G136000--Sobic009G131200 Sobic009G136000--Sobic002G052800 Sobic002G173400--Sobic008G131900 Sobic009G120400 Sobic009G120400 Sobic002G173400--Sobic009G120400 Sobic003G194800 Sobic003G194800 Sobic002G173400--Sobic003G194800 Sobic008G047500 Sobic008G047500 Sobic002G173400--Sobic008G047500 Sobic002G173400--Sobic002G052800 Sobic002G173400--Sobic010G038200 Sobic010G143600 Sobic010G143600 Sobic002G173400--Sobic010G143600 Sobic004G000400 Sobic004G000400 Sobic002G173400--Sobic004G000400 Sobic002G173400--Sobic005G060100 Sobic007G105700 Sobic007G105700 Sobic005G060100--Sobic007G105700 Sobic005G060100--Sobic007G102300 Sobic001G385300 Sobic001G385300 Sobic005G060100--Sobic001G385300 Sobic005G060100--Sobic003G216600 Sobic001G433600 Sobic001G433600 Sobic005G060100--Sobic001G433600 Sobic005G060100--Sobic004G298600 Sobic001G117900 Sobic001G117900 Sobic005G060100--Sobic001G117900 Sobic003G352900 Sobic003G352900 Sobic005G060100--Sobic003G352900 Sobic005G060100--Sobic001G131900 Sobic003G377300 Sobic003G377300 Sobic008G140600--Sobic003G377300 Sobic008G140600--Sobic009G168100 Sobic003G102100 Sobic003G102100 Sobic008G140600--Sobic003G102100 Sobic010G090000 Sobic010G090000 Sobic008G140600--Sobic010G090000 Sobic005G045800 Sobic005G045800 Sobic008G140600--Sobic005G045800 Sobic008G104000 Sobic008G104000 Sobic008G140600--Sobic008G104000 Sobic007G141600 Sobic007G141600 Sobic008G140600--Sobic007G141600 Sobic010G261800 Sobic010G261800 Sobic008G140600--Sobic010G261800 Sobic008G140600--Sobic002G322700 Sobic008G131900--Sobic002G173400 Sobic008G131900--Sobic010G038200 Sobic008G131900--Sobic009G136000 Sobic010G024000 Sobic010G024000 Sobic008G131900--Sobic010G024000 Sobic008G131900--Sobic010G030000 Sobic001G486600 Sobic001G486600 Sobic008G131900--Sobic001G486600 Sobic008G131900--Sobic002G052800 Sobic010G222800 Sobic010G222800 Sobic008G131900--Sobic010G222800 Sobic008G131900--Sobic006G193100 Sobic003G301800--Sobic002G052800 Sobic006G119900 Sobic006G119900 Sobic003G301800--Sobic006G119900 Sobic003G301800--Sobic006G189000 Sobic003G301800--Sobic010G009700 Sobic003G301800--Sobic002G151500 Sobic003G301800--Sobic007G105700 Sobic003G301800--Sobic005G060100 Sobic003G301800--Sobic009G168100 Sobic003G301800--Sobic009G125800 Sobic009G168100--Sobic008G140600 Sobic001G359000 Sobic001G359000 Sobic009G168100--Sobic001G359000 Sobic009G168100--Sobic005G045800 Sobic008G073500 Sobic008G073500 Sobic009G168100--Sobic008G073500 Sobic009G168100--Sobic010G090000 Sobic003G376900 Sobic003G376900 Sobic009G168100--Sobic003G376900 Sobic009G168100--Sobic003G377300 Sobic003G177600 Sobic003G177600 Sobic009G168100--Sobic003G177600 Sobic009G168100--Sobic001G385300
Octagon: transcription factors


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