Gene annotation
Transcriptome id Sobic.010G024000.2
Synonym Sb10g002250
Functional annotation transketolase, chloroplast precursor, putative, expressed
UniProt C5Z3D3
Pfam PF02780 PF02779 PF00456
Panther DB PTHR11624 PTHR11624:SF81
NCBI CDD -
KEGG Orthology K00615; E2.2.1.1, tktA, transketolase
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT2G45290 : Transketolase
RAP-DB (Rice) LOC_Os06g04270.1 : transketolase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051761 , Zm00025a050138
Brachypodium KQK19985
Barley HORVU7Hr1G013600.3 , HORVU7Hr1G013600.2 , HORVU7Hr1G013600.1 , HORVU7Hr1G013600.6 , HORVU7Hr1G013600.5 , HORVU7Hr1G013600.4
Wheat TraesCS2B02G090100 , TraesCSU02G063400 , TraesCSU02G063400 , TraesCS7A02G071100 , TraesCS7A02G071100 , TraesCS7D02G066500
Populus PNT49718 , PNT49717


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G222800 expressed protein -
2 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
3 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
4 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
5 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
6 Sobic.002G173400 expressed protein -
7 Sobic.006G193100 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
8 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
9 Sobic.002G052800 FAR1 family protein, expressed -
10 Sobic.006G093200 PHD finger protein, putative, expressed -
11 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
12 Sobic.003G336900 inactive receptor kinase At2g26730 precursor, putative, expressed -
13 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
14 Sobic.008G070700 leafbladeless1, putative, expressed -
15 Sobic.009G120400 methyltransferase, putative, expressed -
16 Sobic.004G328300 expressed protein -
17 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
18 Sobic.004G306100 expressed protein -
19 Sobic.009G131200 expressed protein -
20 Sobic.003G013800 expressed protein -


Gene co-expression network
sample Sobic010G024000 Sobic010G024000 Sobic010G222800 Sobic010G222800 Sobic010G024000--Sobic010G222800 Sobic008G131900 Sobic008G131900 Sobic010G024000--Sobic008G131900 Sobic007G076200 Sobic007G076200 Sobic010G024000--Sobic007G076200 Sobic003G411700 Sobic003G411700 Sobic010G024000--Sobic003G411700 Sobic002G271400 Sobic002G271400 Sobic010G024000--Sobic002G271400 Sobic002G173400 Sobic002G173400 Sobic010G024000--Sobic002G173400 Sobic006G193100 Sobic006G193100 Sobic010G024000--Sobic006G193100 Sobic003G343200 Sobic003G343200 Sobic010G024000--Sobic003G343200 Sobic002G052800 Sobic002G052800 Sobic010G024000--Sobic002G052800 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic008G070700 Sobic008G070700 Sobic010G222800--Sobic008G070700 Sobic010G222800--Sobic002G271400 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic010G222800--Sobic008G131900 Sobic008G131900--Sobic002G173400 Sobic010G038200 Sobic010G038200 Sobic008G131900--Sobic010G038200 Sobic009G136000 Sobic009G136000 Sobic008G131900--Sobic009G136000 Sobic008G131900--Sobic010G024000 Sobic010G030000 Sobic010G030000 Sobic008G131900--Sobic010G030000 Sobic001G486600 Sobic001G486600 Sobic008G131900--Sobic001G486600 Sobic008G131900--Sobic002G052800 Sobic008G131900--Sobic010G222800 Sobic008G131900--Sobic006G193100 Sobic007G076200--Sobic010G024000 Sobic007G076200--Sobic006G193100 Sobic009G202801 Sobic009G202801 Sobic007G076200--Sobic009G202801 Sobic007G076200--Sobic010G222800 Sobic007G087800 Sobic007G087800 Sobic007G076200--Sobic007G087800 Sobic007G076200--Sobic008G070700 Sobic002G074000 Sobic002G074000 Sobic007G076200--Sobic002G074000 Sobic003G031700 Sobic003G031700 Sobic007G076200--Sobic003G031700 Sobic001G008300 Sobic001G008300 Sobic007G076200--Sobic001G008300 Sobic003G411700--Sobic010G222800 Sobic004G306100 Sobic004G306100 Sobic003G411700--Sobic004G306100 Sobic003G411700--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G411700--Sobic003G343200 Sobic001G212600 Sobic001G212600 Sobic003G411700--Sobic001G212600 Sobic003G411700--Sobic010G024000 Sobic005G160200 Sobic005G160200 Sobic003G411700--Sobic005G160200 Sobic002G271400--Sobic004G306100 Sobic002G271400--Sobic003G343200 Sobic006G127200 Sobic006G127200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic002G271400--Sobic010G024000 Sobic002G173400--Sobic008G131900 Sobic009G120400 Sobic009G120400 Sobic002G173400--Sobic009G120400 Sobic003G194800 Sobic003G194800 Sobic002G173400--Sobic003G194800 Sobic008G047500 Sobic008G047500 Sobic002G173400--Sobic008G047500 Sobic002G173400--Sobic002G052800 Sobic002G173400--Sobic010G038200 Sobic010G143600 Sobic010G143600 Sobic002G173400--Sobic010G143600 Sobic004G000400 Sobic004G000400 Sobic002G173400--Sobic004G000400 Sobic005G060100 Sobic005G060100 Sobic002G173400--Sobic005G060100 Sobic006G193100--Sobic003G031700 Sobic006G193100--Sobic001G008300 Sobic006G193100--Sobic009G202801 Sobic003G315700 Sobic003G315700 Sobic006G193100--Sobic003G315700 Sobic004G328300 Sobic004G328300 Sobic006G193100--Sobic004G328300 Sobic008G148000 Sobic008G148000 Sobic006G193100--Sobic008G148000 Sobic002G319300 Sobic002G319300 Sobic006G193100--Sobic002G319300 Sobic006G193100--Sobic009G136000 Sobic002G204400 Sobic002G204400 Sobic006G193100--Sobic002G204400 Sobic003G343200--Sobic010G222800 Sobic010G257500 Sobic010G257500 Sobic003G343200--Sobic010G257500 Sobic003G343200--Sobic002G271400 Sobic001G534400 Sobic001G534400 Sobic003G343200--Sobic001G534400 Sobic003G343200--Sobic003G411700 Sobic004G014100 Sobic004G014100 Sobic003G343200--Sobic004G014100 Sobic003G289700 Sobic003G289700 Sobic003G343200--Sobic003G289700 Sobic003G343200--Sobic004G306100 Sobic003G343200--Sobic010G024000 Sobic002G052800--Sobic010G038200 Sobic010G009700 Sobic010G009700 Sobic002G052800--Sobic010G009700 Sobic002G052800--Sobic009G136000 Sobic002G052800--Sobic002G173400 Sobic002G052800--Sobic005G060100 Sobic008G140600 Sobic008G140600 Sobic002G052800--Sobic008G140600 Sobic002G052800--Sobic008G131900 Sobic003G301800 Sobic003G301800 Sobic002G052800--Sobic003G301800 Sobic009G168100 Sobic009G168100 Sobic002G052800--Sobic009G168100
Octagon: transcription factors


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