Gene annotation
Transcriptome id Sobic.009G168100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P954
Pfam PF07762
Panther DB PTHR33086:SF10 PTHR33086
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g16140.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1B02G302900 , TraesCS6A02G097300
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G140600 targeting protein for Xklp2 containing protein, expressed -
2 Sobic.001G359000 expressed protein -
3 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
4 Sobic.008G073500 AAA-type ATPase family protein, putative, expressed -
5 Sobic.010G090000 syntaxin, putative, expressed K08488: syntaxin 7
6 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
7 Sobic.003G377300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
8 Sobic.003G177600 tetratricopeptide repeat containing protein, putative, expressed -
9 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
10 Sobic.004G158600 expressed protein -
11 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
12 Sobic.002G052800 FAR1 family protein, expressed -
13 Sobic.003G102100 expressed protein -
14 Sobic.002G022700 CSLC10 - cellulose synthase-like family C, expressed -
15 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
16 Sobic.005G060100 growth regulator related protein, putative, expressed -
17 Sobic.002G299500 expressed protein -
18 Sobic.002G151500 R-interacting factor 1, putative, expressed -
19 Sobic.004G256100 transporter-related, putative, expressed -
20 Sobic.006G116900 AMP-binding enzyme family protein, expressed -


Gene co-expression network
sample Sobic009G168100 Sobic009G168100 Sobic008G140600 Sobic008G140600 Sobic009G168100--Sobic008G140600 Sobic001G359000 Sobic001G359000 Sobic009G168100--Sobic001G359000 Sobic005G045800 Sobic005G045800 Sobic009G168100--Sobic005G045800 Sobic008G073500 Sobic008G073500 Sobic009G168100--Sobic008G073500 Sobic010G090000 Sobic010G090000 Sobic009G168100--Sobic010G090000 Sobic003G376900 Sobic003G376900 Sobic009G168100--Sobic003G376900 Sobic003G377300 Sobic003G377300 Sobic009G168100--Sobic003G377300 Sobic003G177600 Sobic003G177600 Sobic009G168100--Sobic003G177600 Sobic001G385300 Sobic001G385300 Sobic009G168100--Sobic001G385300 Sobic008G140600--Sobic003G377300 Sobic008G140600--Sobic009G168100 Sobic003G102100 Sobic003G102100 Sobic008G140600--Sobic003G102100 Sobic008G140600--Sobic010G090000 Sobic008G140600--Sobic005G045800 Sobic008G104000 Sobic008G104000 Sobic008G140600--Sobic008G104000 Sobic007G141600 Sobic007G141600 Sobic008G140600--Sobic007G141600 Sobic010G261800 Sobic010G261800 Sobic008G140600--Sobic010G261800 Sobic002G322700 Sobic002G322700 Sobic008G140600--Sobic002G322700 Sobic004G149500 Sobic004G149500 Sobic001G359000--Sobic004G149500 Sobic002G158401 Sobic002G158401 Sobic001G359000--Sobic002G158401 Sobic004G158600 Sobic004G158600 Sobic001G359000--Sobic004G158600 Sobic001G359000--Sobic009G168100 Sobic006G014632 Sobic006G014632 Sobic001G359000--Sobic006G014632 Sobic001G359000--Sobic010G090000 Sobic001G359000--Sobic003G177600 Sobic008G163900 Sobic008G163900 Sobic001G359000--Sobic008G163900 Sobic001G359000--Sobic003G102100 Sobic003G352900 Sobic003G352900 Sobic005G045800--Sobic003G352900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic002G299500 Sobic002G299500 Sobic005G045800--Sobic002G299500 Sobic001G131900 Sobic001G131900 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic005G045800--Sobic009G163100 Sobic007G144100 Sobic007G144100 Sobic005G045800--Sobic007G144100 Sobic007G102000 Sobic007G102000 Sobic008G073500--Sobic007G102000 Sobic010G253200 Sobic010G253200 Sobic008G073500--Sobic010G253200 Sobic009G025700 Sobic009G025700 Sobic008G073500--Sobic009G025700 Sobic005G060100 Sobic005G060100 Sobic008G073500--Sobic005G060100 Sobic008G073500--Sobic001G385300 Sobic007G043700 Sobic007G043700 Sobic008G073500--Sobic007G043700 Sobic001G435700 Sobic001G435700 Sobic008G073500--Sobic001G435700 Sobic009G214500 Sobic009G214500 Sobic008G073500--Sobic009G214500 Sobic008G085950 Sobic008G085950 Sobic008G073500--Sobic008G085950 Sobic004G256100 Sobic004G256100 Sobic010G090000--Sobic004G256100 Sobic010G090000--Sobic010G261800 Sobic001G474100 Sobic001G474100 Sobic010G090000--Sobic001G474100 Sobic007G193600 Sobic007G193600 Sobic010G090000--Sobic007G193600 Sobic010G090000--Sobic003G102100 Sobic001G103600 Sobic001G103600 Sobic010G090000--Sobic001G103600 Sobic001G502100 Sobic001G502100 Sobic010G090000--Sobic001G502100 Sobic003G018000 Sobic003G018000 Sobic010G090000--Sobic003G018000 Sobic002G123400 Sobic002G123400 Sobic010G090000--Sobic002G123400 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic003G376900--Sobic001G385300 Sobic005G020600 Sobic005G020600 Sobic003G376900--Sobic005G020600 Sobic003G376900--Sobic001G435700 Sobic003G376900--Sobic005G045800 Sobic001G072000 Sobic001G072000 Sobic003G376900--Sobic001G072000 Sobic003G377300--Sobic008G140600 Sobic009G142500 Sobic009G142500 Sobic003G377300--Sobic009G142500 Sobic003G377300--Sobic010G261800 Sobic002G151500 Sobic002G151500 Sobic003G377300--Sobic002G151500 Sobic003G377300--Sobic010G090000 Sobic003G377300--Sobic007G141600 Sobic006G152700 Sobic006G152700 Sobic003G377300--Sobic006G152700 Sobic003G379000 Sobic003G379000 Sobic003G377300--Sobic003G379000 Sobic003G377300--Sobic009G168100 Sobic003G177600--Sobic010G090000 Sobic003G177600--Sobic004G256100 Sobic003G177600--Sobic003G102100 Sobic003G177600--Sobic004G158600 Sobic003G177600--Sobic001G474100 Sobic003G177600--Sobic007G193600 Sobic001G015000 Sobic001G015000 Sobic003G177600--Sobic001G015000 Sobic003G177600--Sobic001G502100 Sobic003G177600--Sobic001G103600 Sobic001G385300--Sobic003G376900 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic001G385300--Sobic009G163100 Sobic001G385300--Sobic008G171900 Sobic001G385300--Sobic005G045800 Sobic001G385300--Sobic007G141600 Sobic001G385300--Sobic005G020600 Sobic004G298600 Sobic004G298600 Sobic001G385300--Sobic004G298600
Octagon: transcription factors


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