Gene annotation
Transcriptome id Sobic.003G102100.2
Synonym Sb03g008540
Functional annotation expressed protein
UniProt A0A1W0VWL0
Pfam PF06075
Panther DB PTHR31928 PTHR31928:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70340 : Plant protein of unknown function (DUF936)
RAP-DB (Rice) LOC_Os01g01890.1 : expressed protein
MaizeGDB (Corn) Zm00025a023786 , Zm00025a029194 , Zm00025a014982
Brachypodium KQK02313
Barley HORVU3Hr1G000140.12 , HORVU3Hr1G000140.10 , HORVU3Hr1G000140.11 , HORVU3Hr1G000140.1 , HORVU3Hr1G000140.8 , HORVU3Hr1G000140.2 , HORVU3Hr1G000140.3 , HORVU3Hr1G000140.7 , HORVU3Hr1G000140.9 , HORVU3Hr1G000140.4 , HORVU3Hr1G000140.5 , HORVU3Hr1G000140.6
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G090000 syntaxin, putative, expressed K08488: syntaxin 7
2 Sobic.003G018000 expressed protein -
3 Sobic.008G124600 expressed protein -
4 Sobic.004G256100 transporter-related, putative, expressed -
5 Sobic.001G474100 pumilio-family RNA binding repeat domain containing protein, expressed -
6 Sobic.004G158600 expressed protein -
7 Sobic.001G502100 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
8 Sobic.007G193600 - -
9 Sobic.001G103600 gp176, putative, expressed -
10 Sobic.002G013550 - K08770: ubiquitin C
11 Sobic.001G015000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nuclear antigen, putative, expressed -
12 Sobic.002G123400 OsRR7 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
13 Sobic.001G518900 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.010G261800 OsMADS16 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
15 Sobic.008G071700 - -
16 Sobic.004G254700 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.009G149100 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
18 Sobic.002G019300 OsFBL33 - F-box domain and LRR containing protein, expressed -
19 Sobic.002G298600 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
20 Sobic.005G006900 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G102100 Sobic003G102100 Sobic010G090000 Sobic010G090000 Sobic003G102100--Sobic010G090000 Sobic003G018000 Sobic003G018000 Sobic003G102100--Sobic003G018000 Sobic008G124600 Sobic008G124600 Sobic003G102100--Sobic008G124600 Sobic004G256100 Sobic004G256100 Sobic003G102100--Sobic004G256100 Sobic001G474100 Sobic001G474100 Sobic003G102100--Sobic001G474100 Sobic004G158600 Sobic004G158600 Sobic003G102100--Sobic004G158600 Sobic001G502100 Sobic001G502100 Sobic003G102100--Sobic001G502100 Sobic007G193600 Sobic007G193600 Sobic003G102100--Sobic007G193600 Sobic001G103600 Sobic001G103600 Sobic003G102100--Sobic001G103600 Sobic010G090000--Sobic004G256100 Sobic010G261800 Sobic010G261800 Sobic010G090000--Sobic010G261800 Sobic010G090000--Sobic001G474100 Sobic010G090000--Sobic007G193600 Sobic010G090000--Sobic003G102100 Sobic010G090000--Sobic001G103600 Sobic010G090000--Sobic001G502100 Sobic010G090000--Sobic003G018000 Sobic002G123400 Sobic002G123400 Sobic010G090000--Sobic002G123400 Sobic002G013550 Sobic002G013550 Sobic003G018000--Sobic002G013550 Sobic001G518900 Sobic001G518900 Sobic003G018000--Sobic001G518900 Sobic003G018000--Sobic001G103600 Sobic009G149100 Sobic009G149100 Sobic003G018000--Sobic009G149100 Sobic008G095500 Sobic008G095500 Sobic003G018000--Sobic008G095500 Sobic004G335400 Sobic004G335400 Sobic003G018000--Sobic004G335400 Sobic004G002700 Sobic004G002700 Sobic003G018000--Sobic004G002700 Sobic005G041500 Sobic005G041500 Sobic003G018000--Sobic005G041500 Sobic006G276600 Sobic006G276600 Sobic003G018000--Sobic006G276600 Sobic008G124600--Sobic004G256100 Sobic008G124600--Sobic007G193600 Sobic008G124600--Sobic001G474100 Sobic008G124600--Sobic003G018000 Sobic008G124600--Sobic001G103600 Sobic009G047900 Sobic009G047900 Sobic008G124600--Sobic009G047900 Sobic008G124600--Sobic001G518900 Sobic008G144701 Sobic008G144701 Sobic008G124600--Sobic008G144701 Sobic001G241700 Sobic001G241700 Sobic008G124600--Sobic001G241700 Sobic004G256100--Sobic001G474100 Sobic004G256100--Sobic007G193600 Sobic004G256100--Sobic009G047900 Sobic004G256100--Sobic001G103600 Sobic004G256100--Sobic008G144701 Sobic004G256100--Sobic001G518900 Sobic010G196700 Sobic010G196700 Sobic004G256100--Sobic010G196700 Sobic004G256100--Sobic008G095500 Sobic004G256100--Sobic004G002700 Sobic001G474100--Sobic009G047900 Sobic001G474100--Sobic007G193600 Sobic001G474100--Sobic004G256100 Sobic001G474100--Sobic008G144701 Sobic001G474100--Sobic010G196700 Sobic001G474100--Sobic001G518900 Sobic001G474100--Sobic001G103600 Sobic001G474100--Sobic008G095500 Sobic005G058200 Sobic005G058200 Sobic001G474100--Sobic005G058200 Sobic004G158600--Sobic001G474100 Sobic004G158600--Sobic004G256100 Sobic004G158600--Sobic007G193600 Sobic001G110250 Sobic001G110250 Sobic004G158600--Sobic001G110250 Sobic010G238300 Sobic010G238300 Sobic004G158600--Sobic010G238300 Sobic004G298200 Sobic004G298200 Sobic004G158600--Sobic004G298200 Sobic001G099700 Sobic001G099700 Sobic004G158600--Sobic001G099700 Sobic004G158600--Sobic009G047900 Sobic004G158600--Sobic010G090000 Sobic002G298600 Sobic002G298600 Sobic001G502100--Sobic002G298600 Sobic001G502100--Sobic004G256100 Sobic001G502100--Sobic001G103600 Sobic005G006900 Sobic005G006900 Sobic001G502100--Sobic005G006900 Sobic004G254700 Sobic004G254700 Sobic001G502100--Sobic004G254700 Sobic008G071700 Sobic008G071700 Sobic001G502100--Sobic008G071700 Sobic001G502100--Sobic006G276600 Sobic002G019300 Sobic002G019300 Sobic001G502100--Sobic002G019300 Sobic001G502100--Sobic009G149100 Sobic007G193600--Sobic001G474100 Sobic007G193600--Sobic009G047900 Sobic007G193600--Sobic004G256100 Sobic007G193600--Sobic001G518900 Sobic007G193600--Sobic008G144701 Sobic007G193600--Sobic010G196700 Sobic007G193600--Sobic001G103600 Sobic010G202400 Sobic010G202400 Sobic007G193600--Sobic010G202400 Sobic008G155000 Sobic008G155000 Sobic007G193600--Sobic008G155000 Sobic001G103600--Sobic009G149100 Sobic001G103600--Sobic004G335400 Sobic001G103600--Sobic005G041500 Sobic001G103600--Sobic002G298600 Sobic001G103600--Sobic002G019300 Sobic001G103600--Sobic006G276600 Sobic001G103600--Sobic004G002700 Sobic001G021200 Sobic001G021200 Sobic001G103600--Sobic001G021200 Sobic001G103600--Sobic008G095500
Octagon: transcription factors


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