Gene annotation
Transcriptome id Sobic.004G158600.2
Synonym Sb04g021140
Functional annotation expressed protein
UniProt A0A194YQ12
Pfam PF10275
Panther DB PTHR12931 PTHR12931:SF17
NCBI CDD KOG3991; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28120 : -
RAP-DB (Rice) LOC_Os02g32190.1 : expressed protein
MaizeGDB (Corn) Zm00025a020453 , Zm00025a020454
Brachypodium PNT68710 , PNT68711 , PNT68712 , PNT68713 , PNT68714 , PNT68715 , PNT68716 , PNT76966 , PNT76967 , PNT68707 , PNT68706 , PNT68705 , PNT68709 , PNT68708
Barley HORVU6Hr1G011470.22 , HORVU6Hr1G011470.20 , HORVU6Hr1G011470.21 , HORVU6Hr1G011470.26 , HORVU6Hr1G011470.27 , HORVU6Hr1G011470.24 , HORVU6Hr1G011470.25 , HORVU6Hr1G011470.28 , HORVU6Hr1G011470.29 , HORVU0Hr1G015030.19 , HORVU0Hr1G015030.18 , HORVU0Hr1G015030.11 , HORVU0Hr1G015030.10 , HORVU0Hr1G015030.13 , HORVU0Hr1G015030.12 , HORVU0Hr1G015030.15 , HORVU0Hr1G015030.14 , HORVU0Hr1G015030.17 , HORVU0Hr1G015030.16 , HORVU3Hr1G099470.10 , HORVU3Hr1G099470.11 , HORVU3Hr1G099470.12 , HORVU3Hr1G099470.13 , HORVU3Hr1G099470.14 , HORVU3Hr1G099470.15 , HORVU3Hr1G099470.16 , HORVU3Hr1G099470.17 , HORVU3Hr1G099470.18 , HORVU3Hr1G099470.19 , HORVU6Hr1G011470.19 , HORVU6Hr1G011470.18 , HORVU6Hr1G011470.13 , HORVU6Hr1G011470.12 , HORVU6Hr1G011470.11 , HORVU6Hr1G011470.10 , HORVU6Hr1G011470.17 , HORVU6Hr1G011470.16 , HORVU6Hr1G011470.15 , HORVU6Hr1G011470.14 , HORVU0Hr1G015030.9 , HORVU0Hr1G015030.8 , HORVU0Hr1G015030.5 , HORVU0Hr1G015030.4 , HORVU0Hr1G015030.7 , HORVU0Hr1G015030.6 , HORVU0Hr1G015030.1 , HORVU0Hr1G015030.3 , HORVU0Hr1G015030.2 , HORVU0Hr1G015030.42 , HORVU0Hr1G015030.43 , HORVU0Hr1G015030.40 , HORVU0Hr1G015030.41 , HORVU0Hr1G015030.46 , HORVU0Hr1G015030.47 , HORVU0Hr1G015030.44 , HORVU0Hr1G015030.48 , HORVU6Hr1G011460.18 , HORVU6Hr1G011460.19 , HORVU6Hr1G011460.16 , HORVU6Hr1G011460.17 , HORVU6Hr1G011460.15 , HORVU6Hr1G011460.12 , HORVU6Hr1G011460.13 , HORVU6Hr1G011460.10 , HORVU6Hr1G011460.11 , HORVU3Hr1G099470.25 , HORVU3Hr1G099470.24 , HORVU3Hr1G099470.27 , HORVU3Hr1G099470.26 , HORVU3Hr1G099470.20 , HORVU3Hr1G099470.23 , HORVU3Hr1G099470.22 , HORVU3Hr1G099470.29 , HORVU3Hr1G099470.28 , HORVU2Hr1G038150.5 , HORVU2Hr1G038150.4 , HORVU2Hr1G038150.7 , HORVU2Hr1G038150.6 , HORVU2Hr1G038150.1 , HORVU2Hr1G038150.3 , HORVU2Hr1G038150.2 , HORVU2Hr1G038150.9 , HORVU2Hr1G038150.8 , HORVU6Hr1G013450.28 , HORVU6Hr1G013450.29 , HORVU6Hr1G013450.22 , HORVU6Hr1G013450.23 , HORVU6Hr1G013450.20 , HORVU6Hr1G013450.26 , HORVU6Hr1G013450.24 , HORVU6Hr1G013450.25 , HORVU0Hr1G015030.37 , HORVU0Hr1G015030.36 , HORVU0Hr1G015030.35 , HORVU0Hr1G015030.34 , HORVU0Hr1G015030.33 , HORVU0Hr1G015030.32 , HORVU0Hr1G015030.31 , HORVU0Hr1G015030.30 , HORVU0Hr1G015030.39 , HORVU0Hr1G015030.38 , HORVU6Hr1G011460.23 , HORVU6Hr1G011460.21 , HORVU6Hr1G011460.20 , HORVU6Hr1G011460.8 , HORVU6Hr1G011460.9 , HORVU6Hr1G011460.4 , HORVU6Hr1G011460.7 , HORVU6Hr1G011460.1 , HORVU6Hr1G011460.2 , HORVU6Hr1G011460.3 , HORVU6Hr1G013450.3 , HORVU6Hr1G013450.2 , HORVU6Hr1G013450.1 , HORVU6Hr1G013450.7 , HORVU6Hr1G013450.6 , HORVU6Hr1G013450.5 , HORVU6Hr1G013450.4 , HORVU6Hr1G013450.9 , HORVU6Hr1G013450.8 , HORVU6Hr1G013450.13 , HORVU6Hr1G013450.12 , HORVU6Hr1G013450.11 , HORVU6Hr1G013450.10 , HORVU6Hr1G013450.17 , HORVU6Hr1G013450.16 , HORVU6Hr1G013450.15 , HORVU6Hr1G013450.14 , HORVU6Hr1G013450.19 , HORVU6Hr1G013450.18 , HORVU6Hr1G011470.3 , HORVU6Hr1G011470.2 , HORVU6Hr1G011470.1 , HORVU6Hr1G011470.6 , HORVU6Hr1G011470.5 , HORVU6Hr1G011470.4 , HORVU2Hr1G038150.24 , HORVU2Hr1G038150.25 , HORVU2Hr1G038150.20 , HORVU2Hr1G038150.21 , HORVU2Hr1G038150.22 , HORVU2Hr1G038150.23 , HORVU6Hr1G011470.40 , HORVU6Hr1G011470.41 , HORVU6Hr1G011470.42 , HORVU6Hr1G011470.43 , HORVU3Hr1G099470.32 , HORVU3Hr1G099470.33 , HORVU3Hr1G099470.30 , HORVU3Hr1G099470.34 , HORVU6Hr1G011470.39 , HORVU6Hr1G011470.38 , HORVU6Hr1G011470.35 , HORVU6Hr1G011470.34 , HORVU6Hr1G011470.37 , HORVU6Hr1G011470.36 , HORVU6Hr1G011470.31 , HORVU6Hr1G011470.30 , HORVU6Hr1G011470.33 , HORVU6Hr1G011470.32 , HORVU6Hr1G013450.21 , HORVU6Hr1G013450.27 , HORVU0Hr1G015030.24 , HORVU0Hr1G015030.25 , HORVU0Hr1G015030.26 , HORVU0Hr1G015030.27 , HORVU0Hr1G015030.20 , HORVU0Hr1G015030.21 , HORVU0Hr1G015030.22 , HORVU0Hr1G015030.23 , HORVU0Hr1G015030.28 , HORVU0Hr1G015030.29 , HORVU3Hr1G099470.2 , HORVU3Hr1G099470.3 , HORVU3Hr1G099470.1 , HORVU3Hr1G099470.6 , HORVU3Hr1G099470.7 , HORVU3Hr1G099470.4 , HORVU3Hr1G099470.5 , HORVU3Hr1G099470.8 , HORVU3Hr1G099470.9 , HORVU6Hr1G011470.9 , HORVU2Hr1G038150.11 , HORVU2Hr1G038150.10 , HORVU2Hr1G038150.13 , HORVU2Hr1G038150.12 , HORVU2Hr1G038150.15 , HORVU2Hr1G038150.14 , HORVU2Hr1G038150.17 , HORVU2Hr1G038150.16 , HORVU2Hr1G038150.18
Wheat TraesCS6B02G101800 , TraesCS3D02G460600 , TraesCS3B02G509600 , TraesCS6B02G081500 , TraesCS2B02G224400 , TraesCS3A02G465400 , TraesCS2D02G204800 , TraesCS3A02G465600 , TraesCS3D02G460800 , TraesCS3A02G465600 , TraesCS6D02G064700 , TraesCS2A02G196800 , TraesCS6D02G064800 , TraesCS6B02G080900 , TraesCS6A02G060900 , TraesCS2D02G096500 , TraesCS6B02G080300 , TraesCS6A02G061100 , TraesCS6D02G063900 , TraesCS2A02G273400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G474100 pumilio-family RNA binding repeat domain containing protein, expressed -
2 Sobic.004G256100 transporter-related, putative, expressed -
3 Sobic.007G193600 - -
4 Sobic.001G110250 - -
5 Sobic.010G238300 - -
6 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
7 Sobic.001G099700 Invertase genes(PubMedID : 24456189)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
8 Sobic.009G047900 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
9 Sobic.010G090000 syntaxin, putative, expressed K08488: syntaxin 7
10 Sobic.008G144701 - -
11 Sobic.004G093100 protein kinase family protein, putative, expressed -
12 Sobic.001G194800 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
13 Sobic.008G124600 expressed protein -
14 Sobic.010G253600 OsFBL18 - F-box domain and LRR containing protein, expressed -
15 Sobic.003G102100 expressed protein -
16 Sobic.001G518900 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.008G071800 - -
18 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
19 Sobic.001G253750 - -
20 Sobic.003G175350 - -


Gene co-expression network
sample Sobic004G158600 Sobic004G158600 Sobic001G474100 Sobic001G474100 Sobic004G158600--Sobic001G474100 Sobic004G256100 Sobic004G256100 Sobic004G158600--Sobic004G256100 Sobic007G193600 Sobic007G193600 Sobic004G158600--Sobic007G193600 Sobic001G110250 Sobic001G110250 Sobic004G158600--Sobic001G110250 Sobic010G238300 Sobic010G238300 Sobic004G158600--Sobic010G238300 Sobic004G298200 Sobic004G298200 Sobic004G158600--Sobic004G298200 Sobic001G099700 Sobic001G099700 Sobic004G158600--Sobic001G099700 Sobic009G047900 Sobic009G047900 Sobic004G158600--Sobic009G047900 Sobic010G090000 Sobic010G090000 Sobic004G158600--Sobic010G090000 Sobic001G474100--Sobic009G047900 Sobic001G474100--Sobic007G193600 Sobic001G474100--Sobic004G256100 Sobic008G144701 Sobic008G144701 Sobic001G474100--Sobic008G144701 Sobic010G196700 Sobic010G196700 Sobic001G474100--Sobic010G196700 Sobic001G518900 Sobic001G518900 Sobic001G474100--Sobic001G518900 Sobic001G103600 Sobic001G103600 Sobic001G474100--Sobic001G103600 Sobic008G095500 Sobic008G095500 Sobic001G474100--Sobic008G095500 Sobic005G058200 Sobic005G058200 Sobic001G474100--Sobic005G058200 Sobic004G256100--Sobic001G474100 Sobic004G256100--Sobic007G193600 Sobic004G256100--Sobic009G047900 Sobic004G256100--Sobic001G103600 Sobic004G256100--Sobic008G144701 Sobic004G256100--Sobic001G518900 Sobic004G256100--Sobic010G196700 Sobic004G256100--Sobic008G095500 Sobic004G002700 Sobic004G002700 Sobic004G256100--Sobic004G002700 Sobic007G193600--Sobic001G474100 Sobic007G193600--Sobic009G047900 Sobic007G193600--Sobic004G256100 Sobic007G193600--Sobic001G518900 Sobic007G193600--Sobic008G144701 Sobic007G193600--Sobic010G196700 Sobic007G193600--Sobic001G103600 Sobic010G202400 Sobic010G202400 Sobic007G193600--Sobic010G202400 Sobic008G155000 Sobic008G155000 Sobic007G193600--Sobic008G155000 Sobic001G110250--Sobic001G474100 Sobic001G110250--Sobic008G144701 Sobic001G194800 Sobic001G194800 Sobic001G110250--Sobic001G194800 Sobic005G176700 Sobic005G176700 Sobic001G110250--Sobic005G176700 Sobic001G110250--Sobic009G047900 Sobic008G055200 Sobic008G055200 Sobic001G110250--Sobic008G055200 Sobic005G000900 Sobic005G000900 Sobic001G110250--Sobic005G000900 Sobic007G142801 Sobic007G142801 Sobic001G110250--Sobic007G142801 Sobic007G198900 Sobic007G198900 Sobic001G110250--Sobic007G198900 Sobic010G253600 Sobic010G253600 Sobic010G238300--Sobic010G253600 Sobic004G093100 Sobic004G093100 Sobic010G238300--Sobic004G093100 Sobic010G010201 Sobic010G010201 Sobic010G238300--Sobic010G010201 Sobic001G135800 Sobic001G135800 Sobic010G238300--Sobic001G135800 Sobic006G115700 Sobic006G115700 Sobic010G238300--Sobic006G115700 Sobic010G238300--Sobic007G142801 Sobic010G142401 Sobic010G142401 Sobic010G238300--Sobic010G142401 Sobic008G071400 Sobic008G071400 Sobic010G238300--Sobic008G071400 Sobic006G066100 Sobic006G066100 Sobic010G238300--Sobic006G066100 Sobic004G298200--Sobic001G194800 Sobic001G112600 Sobic001G112600 Sobic004G298200--Sobic001G112600 Sobic004G298200--Sobic006G115700 Sobic002G364700 Sobic002G364700 Sobic004G298200--Sobic002G364700 Sobic003G244400 Sobic003G244400 Sobic004G298200--Sobic003G244400 Sobic004G298200--Sobic008G055200 Sobic005G050400 Sobic005G050400 Sobic004G298200--Sobic005G050400 Sobic002G192800 Sobic002G192800 Sobic004G298200--Sobic002G192800 Sobic004G298200--Sobic010G253600 Sobic008G165401 Sobic008G165401 Sobic001G099700--Sobic008G165401 Sobic010G048966 Sobic010G048966 Sobic001G099700--Sobic010G048966 Sobic001G099700--Sobic001G474100 Sobic002G015200 Sobic002G015200 Sobic001G099700--Sobic002G015200 Sobic009G103650 Sobic009G103650 Sobic001G099700--Sobic009G103650 Sobic001G099700--Sobic008G144701 Sobic001G099700--Sobic001G110250 Sobic001G099700--Sobic009G047900 Sobic001G099700--Sobic007G193600 Sobic009G047900--Sobic010G196700 Sobic009G047900--Sobic005G058200 Sobic005G007200 Sobic005G007200 Sobic009G047900--Sobic005G007200 Sobic001G364300 Sobic001G364300 Sobic009G047900--Sobic001G364300 Sobic008G088500 Sobic008G088500 Sobic009G047900--Sobic008G088500 Sobic007G082300 Sobic007G082300 Sobic009G047900--Sobic007G082300 Sobic009G047900--Sobic001G518900 Sobic004G086900 Sobic004G086900 Sobic009G047900--Sobic004G086900 Sobic008G168500 Sobic008G168500 Sobic009G047900--Sobic008G168500 Sobic010G090000--Sobic004G256100 Sobic010G261800 Sobic010G261800 Sobic010G090000--Sobic010G261800 Sobic010G090000--Sobic001G474100 Sobic010G090000--Sobic007G193600 Sobic003G102100 Sobic003G102100 Sobic010G090000--Sobic003G102100 Sobic010G090000--Sobic001G103600 Sobic001G502100 Sobic001G502100 Sobic010G090000--Sobic001G502100 Sobic003G018000 Sobic003G018000 Sobic010G090000--Sobic003G018000 Sobic002G123400 Sobic002G123400 Sobic010G090000--Sobic002G123400
Octagon: transcription factors


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