Gene annotation
Transcriptome id Sobic.010G253600.1
Synonym
Functional annotation OsFBL18 - F-box domain and LRR containing protein, expressed
UniProt A0A194YLE1
Pfam -
Panther DB PTHR32153 PTHR32153:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80960 : F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os04g40800.1 : OsFBL18 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G238300 - -
2 Sobic.001G135800 pentatricopeptide, putative, expressed -
3 Sobic.007G142801 - -
4 Sobic.010G142401 - -
5 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
6 Sobic.010G010201 - -
7 Sobic.001G172100 - -
8 Sobic.003G297100 expressed protein -
9 Sobic.005G002100 protein kinase domain containing protein, expressed -
10 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
11 Sobic.005G026700 - -
12 Sobic.004G136100 - -
13 Sobic.002G000200 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
14 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
15 Sobic.008G055200 dirigent, putative, expressed -
16 Sobic.003G164400 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
17 Sobic.006G066100 conserved hypothetical protein -
18 Sobic.005G176700 methyltransferase, putative, expressed -
19 Sobic.007G131000 dynamin-2B, putative, expressed K01528: dynamin 1/3
20 Sobic.009G103650 - -


Gene co-expression network
sample Sobic010G253600 Sobic010G253600 Sobic010G238300 Sobic010G238300 Sobic010G253600--Sobic010G238300 Sobic001G135800 Sobic001G135800 Sobic010G253600--Sobic001G135800 Sobic007G142801 Sobic007G142801 Sobic010G253600--Sobic007G142801 Sobic010G142401 Sobic010G142401 Sobic010G253600--Sobic010G142401 Sobic006G115700 Sobic006G115700 Sobic010G253600--Sobic006G115700 Sobic010G010201 Sobic010G010201 Sobic010G253600--Sobic010G010201 Sobic001G172100 Sobic001G172100 Sobic010G253600--Sobic001G172100 Sobic003G297100 Sobic003G297100 Sobic010G253600--Sobic003G297100 Sobic005G002100 Sobic005G002100 Sobic010G253600--Sobic005G002100 Sobic010G238300--Sobic010G253600 Sobic004G093100 Sobic004G093100 Sobic010G238300--Sobic004G093100 Sobic010G238300--Sobic010G010201 Sobic010G238300--Sobic001G135800 Sobic010G238300--Sobic006G115700 Sobic010G238300--Sobic007G142801 Sobic010G238300--Sobic010G142401 Sobic008G071400 Sobic008G071400 Sobic010G238300--Sobic008G071400 Sobic006G066100 Sobic006G066100 Sobic010G238300--Sobic006G066100 Sobic001G135800--Sobic006G115700 Sobic001G135800--Sobic007G142801 Sobic001G135800--Sobic003G297100 Sobic001G135800--Sobic001G172100 Sobic005G026700 Sobic005G026700 Sobic001G135800--Sobic005G026700 Sobic003G164400 Sobic003G164400 Sobic001G135800--Sobic003G164400 Sobic002G000200 Sobic002G000200 Sobic001G135800--Sobic002G000200 Sobic001G135800--Sobic005G002100 Sobic009G061500 Sobic009G061500 Sobic001G135800--Sobic009G061500 Sobic007G142801--Sobic001G172100 Sobic007G142801--Sobic003G297100 Sobic007G142801--Sobic005G026700 Sobic007G142801--Sobic005G002100 Sobic007G142801--Sobic003G164400 Sobic007G142801--Sobic002G000200 Sobic007G131000 Sobic007G131000 Sobic007G142801--Sobic007G131000 Sobic005G214800 Sobic005G214800 Sobic007G142801--Sobic005G214800 Sobic001G246001 Sobic001G246001 Sobic007G142801--Sobic001G246001 Sobic010G142401--Sobic007G142801 Sobic010G142401--Sobic001G172100 Sobic010G142401--Sobic005G002100 Sobic010G142401--Sobic005G026700 Sobic010G142401--Sobic003G164400 Sobic010G142401--Sobic002G000200 Sobic010G142401--Sobic003G297100 Sobic005G187600 Sobic005G187600 Sobic010G142401--Sobic005G187600 Sobic003G111000 Sobic003G111000 Sobic010G142401--Sobic003G111000 Sobic006G115700--Sobic003G297100 Sobic006G115700--Sobic007G142801 Sobic006G115700--Sobic001G135800 Sobic002G364700 Sobic002G364700 Sobic006G115700--Sobic002G364700 Sobic009G061601 Sobic009G061601 Sobic006G115700--Sobic009G061601 Sobic001G432200 Sobic001G432200 Sobic006G115700--Sobic001G432200 Sobic005G176700 Sobic005G176700 Sobic006G115700--Sobic005G176700 Sobic006G204500 Sobic006G204500 Sobic006G115700--Sobic006G204500 Sobic001G370400 Sobic001G370400 Sobic006G115700--Sobic001G370400 Sobic010G128350 Sobic010G128350 Sobic010G010201--Sobic010G128350 Sobic010G010201--Sobic001G432200 Sobic010G010201--Sobic010G253600 Sobic010G010201--Sobic007G142801 Sobic002G088600 Sobic002G088600 Sobic010G010201--Sobic002G088600 Sobic003G093100 Sobic003G093100 Sobic010G010201--Sobic003G093100 Sobic001G165901 Sobic001G165901 Sobic010G010201--Sobic001G165901 Sobic010G010201--Sobic001G135800 Sobic010G010201--Sobic001G172100 Sobic001G172100--Sobic005G026700 Sobic001G172100--Sobic005G002100 Sobic001G172100--Sobic003G164400 Sobic001G172100--Sobic007G142801 Sobic001G172100--Sobic002G000200 Sobic001G094700 Sobic001G094700 Sobic001G172100--Sobic001G094700 Sobic003G297100--Sobic007G131000 Sobic003G297100--Sobic009G061601 Sobic001G093100 Sobic001G093100 Sobic003G297100--Sobic001G093100 Sobic003G297100--Sobic007G142801 Sobic003G297100--Sobic003G164400 Sobic007G215200 Sobic007G215200 Sobic003G297100--Sobic007G215200 Sobic003G304600 Sobic003G304600 Sobic003G297100--Sobic003G304600 Sobic006G205400 Sobic006G205400 Sobic003G297100--Sobic006G205400 Sobic003G297100--Sobic005G026700 Sobic005G002100--Sobic005G026700 Sobic005G002100--Sobic003G164400 Sobic005G002100--Sobic001G094700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.