Gene annotation
Transcriptome id Sobic.001G103600.1
Synonym Sb01g009250
Functional annotation gp176, putative, expressed
UniProt A0A1B6QI97
Pfam PF11443
Panther DB PTHR31373 PTHR31373:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43400 : Uncharacterised conserved protein UCP015417, vWA
RAP-DB (Rice) LOC_Os09g32360.1 : gp176, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK11816
Barley HORVU5Hr1G081560.3 , HORVU5Hr1G081560.2 , HORVU5Hr1G081560.5 , HORVU5Hr1G081560.4 , HORVU3Hr1G117270.1 , HORVU5Hr1G079400.3 , HORVU5Hr1G079400.2 , HORVU5Hr1G079400.1 , HORVU3Hr1G117270.2 , HORVU6Hr1G013080.4 , HORVU6Hr1G013080.1 , HORVU6Hr1G013080.2 , HORVU6Hr1G013080.3 , HORVU7Hr1G112970.1
Wheat TraesCS5D02G325700 , TraesCS7D02G490900 , TraesCS7A02G503000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G149100 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
2 Sobic.004G335400 expressed protein -
3 Sobic.005G041500 OsProCP5 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
4 Sobic.002G298600 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
5 Sobic.002G019300 OsFBL33 - F-box domain and LRR containing protein, expressed -
6 Sobic.006G276600 auxin-induced protein 5NG4, putative, expressed -
7 Sobic.004G002700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
8 Sobic.001G021200 elongation factor, putative, expressed -
9 Sobic.008G095500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
10 Sobic.005G058000 expressed protein -
11 Sobic.002G096600 OsFBX15 - F-box domain containing protein, expressed -
12 Sobic.004G254700 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.001G241700 MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
14 Sobic.010G202400 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.004G003300 integral membrane protein DUF6 containing protein, expressed -
16 Sobic.008G168500 amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
17 Sobic.008G088500 amino acid transporter, putative, expressed -
18 Sobic.001G518900 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.009G047900 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
20 Sobic.001G364300 - -


Gene co-expression network
sample Sobic001G103600 Sobic001G103600 Sobic009G149100 Sobic009G149100 Sobic001G103600--Sobic009G149100 Sobic004G335400 Sobic004G335400 Sobic001G103600--Sobic004G335400 Sobic005G041500 Sobic005G041500 Sobic001G103600--Sobic005G041500 Sobic002G298600 Sobic002G298600 Sobic001G103600--Sobic002G298600 Sobic002G019300 Sobic002G019300 Sobic001G103600--Sobic002G019300 Sobic006G276600 Sobic006G276600 Sobic001G103600--Sobic006G276600 Sobic004G002700 Sobic004G002700 Sobic001G103600--Sobic004G002700 Sobic001G021200 Sobic001G021200 Sobic001G103600--Sobic001G021200 Sobic008G095500 Sobic008G095500 Sobic001G103600--Sobic008G095500 Sobic009G149100--Sobic006G276600 Sobic009G149100--Sobic002G019300 Sobic009G149100--Sobic004G335400 Sobic009G149100--Sobic005G041500 Sobic004G254700 Sobic004G254700 Sobic009G149100--Sobic004G254700 Sobic009G149100--Sobic002G298600 Sobic001G241700 Sobic001G241700 Sobic009G149100--Sobic001G241700 Sobic008G071700 Sobic008G071700 Sobic009G149100--Sobic008G071700 Sobic009G149100--Sobic001G103600 Sobic004G335400--Sobic002G019300 Sobic004G335400--Sobic005G041500 Sobic004G335400--Sobic006G276600 Sobic004G335400--Sobic002G298600 Sobic004G335400--Sobic009G149100 Sobic004G335400--Sobic004G254700 Sobic004G335400--Sobic001G241700 Sobic004G335400--Sobic001G021200 Sobic010G202400 Sobic010G202400 Sobic004G335400--Sobic010G202400 Sobic005G041500--Sobic004G335400 Sobic005G041500--Sobic006G276600 Sobic005G041500--Sobic002G019300 Sobic005G041500--Sobic002G298600 Sobic005G041500--Sobic009G149100 Sobic005G041500--Sobic004G254700 Sobic005G041500--Sobic001G241700 Sobic005G041500--Sobic010G202400 Sobic005G041500--Sobic001G021200 Sobic002G298600--Sobic004G335400 Sobic002G298600--Sobic002G019300 Sobic002G298600--Sobic005G041500 Sobic002G298600--Sobic006G276600 Sobic002G298600--Sobic009G149100 Sobic002G298600--Sobic004G254700 Sobic002G298600--Sobic001G241700 Sobic002G298600--Sobic001G021200 Sobic002G298600--Sobic010G202400 Sobic002G019300--Sobic004G335400 Sobic002G019300--Sobic006G276600 Sobic002G019300--Sobic005G041500 Sobic002G019300--Sobic009G149100 Sobic002G019300--Sobic004G254700 Sobic002G019300--Sobic002G298600 Sobic002G019300--Sobic008G071700 Sobic002G019300--Sobic001G241700 Sobic002G019300--Sobic001G021200 Sobic006G276600--Sobic002G019300 Sobic006G276600--Sobic005G041500 Sobic006G276600--Sobic004G335400 Sobic006G276600--Sobic009G149100 Sobic006G276600--Sobic004G254700 Sobic006G276600--Sobic002G298600 Sobic006G276600--Sobic001G241700 Sobic006G276600--Sobic008G071700 Sobic006G276600--Sobic010G202400 Sobic004G003300 Sobic004G003300 Sobic004G002700--Sobic004G003300 Sobic004G002700--Sobic010G202400 Sobic004G002700--Sobic001G021200 Sobic004G002700--Sobic001G241700 Sobic005G058000 Sobic005G058000 Sobic004G002700--Sobic005G058000 Sobic002G096600 Sobic002G096600 Sobic004G002700--Sobic002G096600 Sobic004G002700--Sobic008G095500 Sobic008G088500 Sobic008G088500 Sobic004G002700--Sobic008G088500 Sobic004G002700--Sobic009G149100 Sobic001G021200--Sobic005G058000 Sobic001G021200--Sobic002G096600 Sobic008G168500 Sobic008G168500 Sobic001G021200--Sobic008G168500 Sobic001G021200--Sobic008G088500 Sobic003G428500 Sobic003G428500 Sobic001G021200--Sobic003G428500 Sobic001G021200--Sobic008G095500 Sobic001G364300 Sobic001G364300 Sobic001G021200--Sobic001G364300 Sobic001G021200--Sobic010G202400 Sobic005G007200 Sobic005G007200 Sobic001G021200--Sobic005G007200 Sobic008G095500--Sobic008G088500 Sobic008G095500--Sobic008G168500 Sobic008G095500--Sobic002G096600 Sobic008G095500--Sobic005G058000 Sobic008G095500--Sobic001G364300 Sobic005G058200 Sobic005G058200 Sobic008G095500--Sobic005G058200 Sobic008G095500--Sobic001G021200 Sobic008G095500--Sobic005G007200 Sobic008G177001 Sobic008G177001 Sobic008G095500--Sobic008G177001
Octagon: transcription factors


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