Gene annotation
Transcriptome id Sobic.001G021200.5
Synonym LOS1
Functional annotation elongation factor, putative, expressed
UniProt A0A1B6QGX8
Pfam -
Panther DB PTHR23115 PTHR23115:SF131
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56070 : Ribosomal protein S5/Elongation factor G/III/V family protein
RAP-DB (Rice) LOC_Os04g02820.3 : elongation factor, putative, expressed
MaizeGDB (Corn) Zm00025a008947
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G058000 expressed protein -
2 Sobic.002G096600 OsFBX15 - F-box domain containing protein, expressed -
3 Sobic.008G168500 amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
4 Sobic.008G088500 amino acid transporter, putative, expressed -
5 Sobic.003G428500 expressed protein -
6 Sobic.008G095500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
7 Sobic.001G364300 - -
8 Sobic.010G202400 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.005G007200 DEFL53 - Defensin and Defensin-like DEFL family -
10 Sobic.005G058200 expressed protein -
11 Sobic.004G003300 integral membrane protein DUF6 containing protein, expressed -
12 Sobic.005G041500 OsProCP5 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
13 Sobic.008G177001 - -
14 Sobic.004G335400 expressed protein -
15 Sobic.001G241700 MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
16 Sobic.002G298600 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
17 Sobic.004G002700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
18 Sobic.010G196700 gp176, putative, expressed -
19 Sobic.006G276600 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.002G019300 OsFBL33 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic001G021200 Sobic001G021200 Sobic005G058000 Sobic005G058000 Sobic001G021200--Sobic005G058000 Sobic002G096600 Sobic002G096600 Sobic001G021200--Sobic002G096600 Sobic008G168500 Sobic008G168500 Sobic001G021200--Sobic008G168500 Sobic008G088500 Sobic008G088500 Sobic001G021200--Sobic008G088500 Sobic003G428500 Sobic003G428500 Sobic001G021200--Sobic003G428500 Sobic008G095500 Sobic008G095500 Sobic001G021200--Sobic008G095500 Sobic001G364300 Sobic001G364300 Sobic001G021200--Sobic001G364300 Sobic010G202400 Sobic010G202400 Sobic001G021200--Sobic010G202400 Sobic005G007200 Sobic005G007200 Sobic001G021200--Sobic005G007200 Sobic005G058000--Sobic002G096600 Sobic005G058000--Sobic008G168500 Sobic005G058000--Sobic008G088500 Sobic005G058000--Sobic001G021200 Sobic005G058000--Sobic001G364300 Sobic005G058000--Sobic005G007200 Sobic005G058000--Sobic008G095500 Sobic005G058200 Sobic005G058200 Sobic005G058000--Sobic005G058200 Sobic005G058000--Sobic010G202400 Sobic002G096600--Sobic005G058000 Sobic002G096600--Sobic008G168500 Sobic002G096600--Sobic008G088500 Sobic002G096600--Sobic001G021200 Sobic002G096600--Sobic001G364300 Sobic002G096600--Sobic005G007200 Sobic002G096600--Sobic008G095500 Sobic002G096600--Sobic005G058200 Sobic002G096600--Sobic010G202400 Sobic008G168500--Sobic008G088500 Sobic008G168500--Sobic002G096600 Sobic008G168500--Sobic005G058000 Sobic008G168500--Sobic001G364300 Sobic008G168500--Sobic005G058200 Sobic008G168500--Sobic005G007200 Sobic008G168500--Sobic001G021200 Sobic008G168500--Sobic008G095500 Sobic008G177001 Sobic008G177001 Sobic008G168500--Sobic008G177001 Sobic008G088500--Sobic008G168500 Sobic008G088500--Sobic001G364300 Sobic008G088500--Sobic002G096600 Sobic008G088500--Sobic005G058000 Sobic008G088500--Sobic005G058200 Sobic008G088500--Sobic005G007200 Sobic008G088500--Sobic001G021200 Sobic008G088500--Sobic008G095500 Sobic008G088500--Sobic008G177001 Sobic003G428500--Sobic001G021200 Sobic003G428500--Sobic008G168500 Sobic003G428500--Sobic008G088500 Sobic003G428500--Sobic002G096600 Sobic003G428500--Sobic005G058000 Sobic003G428500--Sobic001G364300 Sobic003G428500--Sobic005G007200 Sobic003G428500--Sobic005G058200 Sobic004G003300 Sobic004G003300 Sobic003G428500--Sobic004G003300 Sobic008G095500--Sobic008G088500 Sobic008G095500--Sobic008G168500 Sobic008G095500--Sobic002G096600 Sobic008G095500--Sobic005G058000 Sobic008G095500--Sobic001G364300 Sobic008G095500--Sobic005G058200 Sobic008G095500--Sobic001G021200 Sobic008G095500--Sobic005G007200 Sobic008G095500--Sobic008G177001 Sobic001G364300--Sobic005G058200 Sobic001G364300--Sobic008G088500 Sobic001G364300--Sobic008G168500 Sobic001G364300--Sobic005G007200 Sobic001G364300--Sobic002G096600 Sobic001G364300--Sobic005G058000 Sobic007G082300 Sobic007G082300 Sobic001G364300--Sobic007G082300 Sobic004G086900 Sobic004G086900 Sobic001G364300--Sobic004G086900 Sobic001G364300--Sobic008G177001 Sobic010G202400--Sobic005G058000 Sobic010G202400--Sobic002G096600 Sobic001G241700 Sobic001G241700 Sobic010G202400--Sobic001G241700 Sobic010G202400--Sobic008G088500 Sobic010G202400--Sobic001G021200 Sobic010G202400--Sobic008G168500 Sobic005G041500 Sobic005G041500 Sobic010G202400--Sobic005G041500 Sobic010G202400--Sobic001G364300 Sobic010G202400--Sobic008G095500 Sobic005G007200--Sobic005G058200 Sobic005G007200--Sobic001G364300 Sobic005G007200--Sobic008G088500 Sobic005G007200--Sobic008G168500 Sobic005G007200--Sobic007G082300 Sobic005G007200--Sobic004G086900 Sobic005G007200--Sobic002G096600 Sobic005G007200--Sobic005G058000 Sobic005G007200--Sobic008G177001
Octagon: transcription factors


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