Gene annotation
Transcriptome id Sobic.010G196700.1
Synonym Sb10g024590
Functional annotation gp176, putative, expressed
UniProt C5Z683
Pfam PF11443
Panther DB PTHR31373 PTHR31373:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13210 : Uncharacterised conserved protein UCP015417, vWA
RAP-DB (Rice) LOC_Os09g32370.1 : gp176, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK11816 , KQK11817 , KQK19864
Barley HORVU5Hr1G081560.3 , HORVU5Hr1G081560.2 , HORVU5Hr1G081560.5 , HORVU3Hr1G117270.1 , HORVU3Hr1G117270.2 , HORVU5Hr1G079400.3 , HORVU5Hr1G079400.2 , HORVU5Hr1G079400.1 , HORVU6Hr1G013080.4 , HORVU6Hr1G013080.1 , HORVU6Hr1G013080.2 , HORVU6Hr1G013080.3 , HORVU5Hr1G079390.2 , HORVU5Hr1G079390.1
Wheat TraesCS5A02G319700 , TraesCS5D02G325700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G058200 expressed protein -
2 Sobic.007G082300 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.004G086900 - -
4 Sobic.001G364300 - -
5 Sobic.007G110800 expressed protein -
6 Sobic.005G007200 DEFL53 - Defensin and Defensin-like DEFL family -
7 Sobic.008G088500 amino acid transporter, putative, expressed -
8 Sobic.005G087732 - -
9 Sobic.007G167950 - -
10 Sobic.008G168500 amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
11 Sobic.009G047900 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.008G095500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
13 Sobic.006G224400 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K12158: ubiquitin-like protein Nedd8
K04551: ubiquitin B
14 Sobic.008G177001 - -
15 Sobic.005G058300 expressed protein -
16 Sobic.002G096600 OsFBX15 - F-box domain containing protein, expressed -
17 Sobic.005G058000 expressed protein -
18 Sobic.007G081800 MBTB22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.009G060100 alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
20 Sobic.001G518900 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic010G196700 Sobic010G196700 Sobic005G058200 Sobic005G058200 Sobic010G196700--Sobic005G058200 Sobic007G082300 Sobic007G082300 Sobic010G196700--Sobic007G082300 Sobic004G086900 Sobic004G086900 Sobic010G196700--Sobic004G086900 Sobic001G364300 Sobic001G364300 Sobic010G196700--Sobic001G364300 Sobic007G110800 Sobic007G110800 Sobic010G196700--Sobic007G110800 Sobic005G007200 Sobic005G007200 Sobic010G196700--Sobic005G007200 Sobic008G088500 Sobic008G088500 Sobic010G196700--Sobic008G088500 Sobic005G087732 Sobic005G087732 Sobic010G196700--Sobic005G087732 Sobic007G167950 Sobic007G167950 Sobic010G196700--Sobic007G167950 Sobic005G058200--Sobic001G364300 Sobic005G058200--Sobic005G007200 Sobic005G058200--Sobic008G088500 Sobic005G058200--Sobic007G082300 Sobic008G168500 Sobic008G168500 Sobic005G058200--Sobic008G168500 Sobic005G058200--Sobic004G086900 Sobic008G177001 Sobic008G177001 Sobic005G058200--Sobic008G177001 Sobic005G058200--Sobic007G110800 Sobic005G058200--Sobic005G087732 Sobic007G082300--Sobic004G086900 Sobic007G082300--Sobic005G087732 Sobic007G082300--Sobic007G167950 Sobic007G082300--Sobic007G110800 Sobic007G082300--Sobic005G058200 Sobic006G224400 Sobic006G224400 Sobic007G082300--Sobic006G224400 Sobic005G058300 Sobic005G058300 Sobic007G082300--Sobic005G058300 Sobic007G082300--Sobic005G007200 Sobic007G081800 Sobic007G081800 Sobic007G082300--Sobic007G081800 Sobic004G086900--Sobic007G082300 Sobic004G086900--Sobic005G087732 Sobic004G086900--Sobic007G167950 Sobic004G086900--Sobic007G110800 Sobic004G086900--Sobic006G224400 Sobic004G086900--Sobic005G058300 Sobic004G086900--Sobic005G058200 Sobic004G086900--Sobic007G081800 Sobic010G123800 Sobic010G123800 Sobic004G086900--Sobic010G123800 Sobic001G364300--Sobic005G058200 Sobic001G364300--Sobic008G088500 Sobic001G364300--Sobic008G168500 Sobic001G364300--Sobic005G007200 Sobic002G096600 Sobic002G096600 Sobic001G364300--Sobic002G096600 Sobic005G058000 Sobic005G058000 Sobic001G364300--Sobic005G058000 Sobic001G364300--Sobic007G082300 Sobic001G364300--Sobic004G086900 Sobic001G364300--Sobic008G177001 Sobic007G110800--Sobic005G087732 Sobic007G110800--Sobic007G167950 Sobic007G110800--Sobic004G086900 Sobic007G110800--Sobic007G082300 Sobic007G110800--Sobic005G058300 Sobic007G110800--Sobic006G224400 Sobic007G110800--Sobic007G081800 Sobic007G110800--Sobic010G123800 Sobic004G046700 Sobic004G046700 Sobic007G110800--Sobic004G046700 Sobic005G007200--Sobic005G058200 Sobic005G007200--Sobic001G364300 Sobic005G007200--Sobic008G088500 Sobic005G007200--Sobic008G168500 Sobic005G007200--Sobic007G082300 Sobic005G007200--Sobic004G086900 Sobic005G007200--Sobic002G096600 Sobic005G007200--Sobic005G058000 Sobic005G007200--Sobic008G177001 Sobic008G088500--Sobic008G168500 Sobic008G088500--Sobic001G364300 Sobic008G088500--Sobic002G096600 Sobic008G088500--Sobic005G058000 Sobic008G088500--Sobic005G058200 Sobic008G088500--Sobic005G007200 Sobic001G021200 Sobic001G021200 Sobic008G088500--Sobic001G021200 Sobic008G095500 Sobic008G095500 Sobic008G088500--Sobic008G095500 Sobic008G088500--Sobic008G177001 Sobic005G087732--Sobic007G167950 Sobic005G087732--Sobic007G110800 Sobic005G087732--Sobic004G086900 Sobic005G087732--Sobic007G082300 Sobic005G087732--Sobic005G058300 Sobic005G087732--Sobic006G224400 Sobic005G087732--Sobic007G081800 Sobic005G087732--Sobic010G123800 Sobic005G087732--Sobic004G046700 Sobic007G167950--Sobic005G087732 Sobic007G167950--Sobic007G110800 Sobic007G167950--Sobic004G086900 Sobic007G167950--Sobic007G082300 Sobic007G167950--Sobic005G058300 Sobic007G167950--Sobic006G224400 Sobic007G167950--Sobic007G081800 Sobic007G167950--Sobic010G123800 Sobic007G167950--Sobic004G046700
Octagon: transcription factors


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