Gene annotation
Transcriptome id Sobic.001G015000.1
Synonym Sb01g001460
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
nuclear antigen, putative, expressed
UniProt C5WSY8
Pfam -
Panther DB PTHR12299 PTHR12299:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47210 : Hyaluronan / mRNA binding family
RAP-DB (Rice) LOC_Os03g62830.1 : nuclear antigen, putative, expressed
MaizeGDB (Corn) Zm00025a009011
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G254700 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.001G103600 gp176, putative, expressed -
3 Sobic.002G019300 OsFBL33 - F-box domain and LRR containing protein, expressed -
4 Sobic.009G149100 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
5 Sobic.006G276600 auxin-induced protein 5NG4, putative, expressed -
6 Sobic.004G335400 expressed protein -
7 Sobic.008G071700 - -
8 Sobic.005G041500 OsProCP5 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
9 Sobic.002G298600 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
10 Sobic.005G006900 RNA recognition motif containing protein, putative, expressed -
11 Sobic.001G241700 MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.001G021200 elongation factor, putative, expressed -
13 Sobic.004G002700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.010G202400 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.005G058000 expressed protein -
16 Sobic.002G096600 OsFBX15 - F-box domain containing protein, expressed -
17 Sobic.008G095500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
18 Sobic.004G003300 integral membrane protein DUF6 containing protein, expressed -
19 Sobic.002G123400 OsRR7 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
20 Sobic.009G240500 lipase class 3 family protein, putative, expressed -


Gene co-expression network
sample Sobic001G015000 Sobic001G015000 Sobic004G254700 Sobic004G254700 Sobic001G015000--Sobic004G254700 Sobic001G103600 Sobic001G103600 Sobic001G015000--Sobic001G103600 Sobic002G019300 Sobic002G019300 Sobic001G015000--Sobic002G019300 Sobic009G149100 Sobic009G149100 Sobic001G015000--Sobic009G149100 Sobic006G276600 Sobic006G276600 Sobic001G015000--Sobic006G276600 Sobic004G335400 Sobic004G335400 Sobic001G015000--Sobic004G335400 Sobic008G071700 Sobic008G071700 Sobic001G015000--Sobic008G071700 Sobic005G041500 Sobic005G041500 Sobic001G015000--Sobic005G041500 Sobic002G298600 Sobic002G298600 Sobic001G015000--Sobic002G298600 Sobic004G254700--Sobic002G019300 Sobic004G254700--Sobic006G276600 Sobic004G254700--Sobic009G149100 Sobic004G254700--Sobic004G335400 Sobic004G254700--Sobic005G041500 Sobic004G254700--Sobic002G298600 Sobic004G254700--Sobic008G071700 Sobic005G006900 Sobic005G006900 Sobic004G254700--Sobic005G006900 Sobic001G241700 Sobic001G241700 Sobic004G254700--Sobic001G241700 Sobic001G103600--Sobic009G149100 Sobic001G103600--Sobic004G335400 Sobic001G103600--Sobic005G041500 Sobic001G103600--Sobic002G298600 Sobic001G103600--Sobic002G019300 Sobic001G103600--Sobic006G276600 Sobic004G002700 Sobic004G002700 Sobic001G103600--Sobic004G002700 Sobic001G021200 Sobic001G021200 Sobic001G103600--Sobic001G021200 Sobic008G095500 Sobic008G095500 Sobic001G103600--Sobic008G095500 Sobic002G019300--Sobic004G335400 Sobic002G019300--Sobic006G276600 Sobic002G019300--Sobic005G041500 Sobic002G019300--Sobic009G149100 Sobic002G019300--Sobic004G254700 Sobic002G019300--Sobic002G298600 Sobic002G019300--Sobic008G071700 Sobic002G019300--Sobic001G241700 Sobic002G019300--Sobic001G021200 Sobic009G149100--Sobic006G276600 Sobic009G149100--Sobic002G019300 Sobic009G149100--Sobic004G335400 Sobic009G149100--Sobic005G041500 Sobic009G149100--Sobic004G254700 Sobic009G149100--Sobic002G298600 Sobic009G149100--Sobic001G241700 Sobic009G149100--Sobic008G071700 Sobic009G149100--Sobic001G103600 Sobic006G276600--Sobic002G019300 Sobic006G276600--Sobic005G041500 Sobic006G276600--Sobic004G335400 Sobic006G276600--Sobic009G149100 Sobic006G276600--Sobic004G254700 Sobic006G276600--Sobic002G298600 Sobic006G276600--Sobic001G241700 Sobic006G276600--Sobic008G071700 Sobic010G202400 Sobic010G202400 Sobic006G276600--Sobic010G202400 Sobic004G335400--Sobic002G019300 Sobic004G335400--Sobic005G041500 Sobic004G335400--Sobic006G276600 Sobic004G335400--Sobic002G298600 Sobic004G335400--Sobic009G149100 Sobic004G335400--Sobic004G254700 Sobic004G335400--Sobic001G241700 Sobic004G335400--Sobic001G021200 Sobic004G335400--Sobic010G202400 Sobic008G071700--Sobic004G254700 Sobic008G071700--Sobic005G006900 Sobic008G071700--Sobic002G019300 Sobic008G071700--Sobic006G276600 Sobic008G071700--Sobic009G149100 Sobic008G071700--Sobic004G335400 Sobic008G071700--Sobic002G298600 Sobic008G071700--Sobic005G041500 Sobic003G090200 Sobic003G090200 Sobic008G071700--Sobic003G090200 Sobic005G041500--Sobic004G335400 Sobic005G041500--Sobic006G276600 Sobic005G041500--Sobic002G019300 Sobic005G041500--Sobic002G298600 Sobic005G041500--Sobic009G149100 Sobic005G041500--Sobic004G254700 Sobic005G041500--Sobic001G241700 Sobic005G041500--Sobic010G202400 Sobic005G041500--Sobic001G021200 Sobic002G298600--Sobic004G335400 Sobic002G298600--Sobic002G019300 Sobic002G298600--Sobic005G041500 Sobic002G298600--Sobic006G276600 Sobic002G298600--Sobic009G149100 Sobic002G298600--Sobic004G254700 Sobic002G298600--Sobic001G241700 Sobic002G298600--Sobic001G021200 Sobic002G298600--Sobic010G202400
Octagon: transcription factors


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