Gene annotation
Transcriptome id Sobic.003G177600.1
Synonym Sb03g022910
Functional annotation tetratricopeptide repeat containing protein, putative, expressed
UniProt C5XM72
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g34470.1 : tetratricopeptide repeat containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a028895 , Zm00025a028894
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G090000 syntaxin, putative, expressed K08488: syntaxin 7
2 Sobic.004G256100 transporter-related, putative, expressed -
3 Sobic.003G102100 expressed protein -
4 Sobic.004G158600 expressed protein -
5 Sobic.001G474100 pumilio-family RNA binding repeat domain containing protein, expressed -
6 Sobic.007G193600 - -
7 Sobic.001G015000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nuclear antigen, putative, expressed -
8 Sobic.001G502100 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
9 Sobic.001G103600 gp176, putative, expressed -
10 Sobic.001G359000 expressed protein -
11 Sobic.009G047900 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.006G196100 expressed protein -
13 Sobic.002G382300 expressed protein -
14 Sobic.001G518900 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.001G099700 Invertase genes(PubMedID : 24456189)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
16 Sobic.008G144701 - -
17 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
18 Sobic.001G194800 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
19 Sobic.008G124600 expressed protein -
20 Sobic.003G018000 expressed protein -


Gene co-expression network
sample Sobic003G177600 Sobic003G177600 Sobic010G090000 Sobic010G090000 Sobic003G177600--Sobic010G090000 Sobic004G256100 Sobic004G256100 Sobic003G177600--Sobic004G256100 Sobic003G102100 Sobic003G102100 Sobic003G177600--Sobic003G102100 Sobic004G158600 Sobic004G158600 Sobic003G177600--Sobic004G158600 Sobic001G474100 Sobic001G474100 Sobic003G177600--Sobic001G474100 Sobic007G193600 Sobic007G193600 Sobic003G177600--Sobic007G193600 Sobic001G015000 Sobic001G015000 Sobic003G177600--Sobic001G015000 Sobic001G502100 Sobic001G502100 Sobic003G177600--Sobic001G502100 Sobic001G103600 Sobic001G103600 Sobic003G177600--Sobic001G103600 Sobic010G090000--Sobic004G256100 Sobic010G261800 Sobic010G261800 Sobic010G090000--Sobic010G261800 Sobic010G090000--Sobic001G474100 Sobic010G090000--Sobic007G193600 Sobic010G090000--Sobic003G102100 Sobic010G090000--Sobic001G103600 Sobic010G090000--Sobic001G502100 Sobic003G018000 Sobic003G018000 Sobic010G090000--Sobic003G018000 Sobic002G123400 Sobic002G123400 Sobic010G090000--Sobic002G123400 Sobic004G256100--Sobic001G474100 Sobic004G256100--Sobic007G193600 Sobic009G047900 Sobic009G047900 Sobic004G256100--Sobic009G047900 Sobic004G256100--Sobic001G103600 Sobic008G144701 Sobic008G144701 Sobic004G256100--Sobic008G144701 Sobic001G518900 Sobic001G518900 Sobic004G256100--Sobic001G518900 Sobic010G196700 Sobic010G196700 Sobic004G256100--Sobic010G196700 Sobic008G095500 Sobic008G095500 Sobic004G256100--Sobic008G095500 Sobic004G002700 Sobic004G002700 Sobic004G256100--Sobic004G002700 Sobic003G102100--Sobic010G090000 Sobic003G102100--Sobic003G018000 Sobic008G124600 Sobic008G124600 Sobic003G102100--Sobic008G124600 Sobic003G102100--Sobic004G256100 Sobic003G102100--Sobic001G474100 Sobic003G102100--Sobic004G158600 Sobic003G102100--Sobic001G502100 Sobic003G102100--Sobic007G193600 Sobic003G102100--Sobic001G103600 Sobic004G158600--Sobic001G474100 Sobic004G158600--Sobic004G256100 Sobic004G158600--Sobic007G193600 Sobic001G110250 Sobic001G110250 Sobic004G158600--Sobic001G110250 Sobic010G238300 Sobic010G238300 Sobic004G158600--Sobic010G238300 Sobic004G298200 Sobic004G298200 Sobic004G158600--Sobic004G298200 Sobic001G099700 Sobic001G099700 Sobic004G158600--Sobic001G099700 Sobic004G158600--Sobic009G047900 Sobic004G158600--Sobic010G090000 Sobic001G474100--Sobic009G047900 Sobic001G474100--Sobic007G193600 Sobic001G474100--Sobic004G256100 Sobic001G474100--Sobic008G144701 Sobic001G474100--Sobic010G196700 Sobic001G474100--Sobic001G518900 Sobic001G474100--Sobic001G103600 Sobic001G474100--Sobic008G095500 Sobic005G058200 Sobic005G058200 Sobic001G474100--Sobic005G058200 Sobic007G193600--Sobic001G474100 Sobic007G193600--Sobic009G047900 Sobic007G193600--Sobic004G256100 Sobic007G193600--Sobic001G518900 Sobic007G193600--Sobic008G144701 Sobic007G193600--Sobic010G196700 Sobic007G193600--Sobic001G103600 Sobic010G202400 Sobic010G202400 Sobic007G193600--Sobic010G202400 Sobic008G155000 Sobic008G155000 Sobic007G193600--Sobic008G155000 Sobic004G254700 Sobic004G254700 Sobic001G015000--Sobic004G254700 Sobic001G015000--Sobic001G103600 Sobic002G019300 Sobic002G019300 Sobic001G015000--Sobic002G019300 Sobic009G149100 Sobic009G149100 Sobic001G015000--Sobic009G149100 Sobic006G276600 Sobic006G276600 Sobic001G015000--Sobic006G276600 Sobic004G335400 Sobic004G335400 Sobic001G015000--Sobic004G335400 Sobic008G071700 Sobic008G071700 Sobic001G015000--Sobic008G071700 Sobic005G041500 Sobic005G041500 Sobic001G015000--Sobic005G041500 Sobic002G298600 Sobic002G298600 Sobic001G015000--Sobic002G298600 Sobic001G502100--Sobic002G298600 Sobic001G502100--Sobic004G256100 Sobic001G502100--Sobic001G103600 Sobic005G006900 Sobic005G006900 Sobic001G502100--Sobic005G006900 Sobic001G502100--Sobic004G254700 Sobic001G502100--Sobic008G071700 Sobic001G502100--Sobic006G276600 Sobic001G502100--Sobic002G019300 Sobic001G502100--Sobic009G149100 Sobic001G103600--Sobic009G149100 Sobic001G103600--Sobic004G335400 Sobic001G103600--Sobic005G041500 Sobic001G103600--Sobic002G298600 Sobic001G103600--Sobic002G019300 Sobic001G103600--Sobic006G276600 Sobic001G103600--Sobic004G002700 Sobic001G021200 Sobic001G021200 Sobic001G103600--Sobic001G021200 Sobic001G103600--Sobic008G095500
Octagon: transcription factors


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