Gene annotation
Transcriptome id Sobic.002G022700.1
Synonym CSLC12, Sb02g002090, ATCSLC12
Functional annotation CSLC10 - cellulose synthase-like family C, expressed
UniProt A0A1B6Q8S8
Pfam PF13632
Panther DB PTHR32044 PTHR32044:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G07960 : Cellulose-synthase-like C12
RAP-DB (Rice) LOC_Os07g03260.1 : CSLC10 - cellulose synthase-like family C, expressed
MaizeGDB (Corn) Zm00025a034690 , Zm00025a016690 , Zm00025a029882 , Zm00025a008347 , Zm00025a044201 , Zm00025a051489 , Zm00025a027859 , Zm00025a039942 , Zm00025a027415 , Zm00025a054705
Brachypodium KQK20919 , KQK12991 , KQJ95800
Barley HORVU3Hr1G074570.2 , HORVU3Hr1G074570.3 , HORVU3Hr1G074570.1 , HORVU3Hr1G074570.6 , HORVU3Hr1G074570.7 , HORVU3Hr1G074570.4 , HORVU3Hr1G074570.5 , HORVU3Hr1G074570.8 , HORVU3Hr1G074570.9 , HORVU3Hr1G074570.11 , HORVU1Hr1G067470.1 , HORVU1Hr1G067470.3 , HORVU1Hr1G067470.2 , HORVU1Hr1G077230.8 , HORVU1Hr1G077230.9 , HORVU1Hr1G077230.6 , HORVU1Hr1G077230.7 , HORVU1Hr1G077230.4 , HORVU1Hr1G077230.2 , HORVU1Hr1G077230.3 , HORVU1Hr1G067470.8 , HORVU1Hr1G067470.5 , HORVU1Hr1G067470.4 , HORVU1Hr1G067470.7 , HORVU1Hr1G067470.6 , HORVU3Hr1G074570.10 , HORVU3Hr1G074570.12 , HORVU3Hr1G074570.13 , HORVU1Hr1G077230.10 , HORVU1Hr1G077230.11 , HORVU7Hr1G092910.4 , HORVU7Hr1G092910.5 , HORVU7Hr1G092910.2 , HORVU7Hr1G092910.3 , HORVU3Hr1G000340.10 , HORVU3Hr1G000340.11 , HORVU3Hr1G000340.12 , HORVU3Hr1G000340.13 , HORVU3Hr1G000340.14 , HORVU3Hr1G000340.15 , HORVU3Hr1G000340.16 , HORVU3Hr1G000340.17 , HORVU3Hr1G000340.18 , HORVU3Hr1G000340.19 , HORVU3Hr1G000340.2 , HORVU3Hr1G000340.3 , HORVU3Hr1G000340.1 , HORVU3Hr1G000340.6 , HORVU3Hr1G000340.7 , HORVU3Hr1G000340.4 , HORVU3Hr1G000340.5 , HORVU3Hr1G000340.8 , HORVU3Hr1G000340.9 , HORVU3Hr1G000340.21 , HORVU3Hr1G000340.20 , HORVU3Hr1G000340.23 , HORVU3Hr1G000340.22
Wheat TraesCS7A02G394000 , TraesCSU02G038900 , TraesCS3A02G299500 , TraesCS1D02G334400 , TraesCS7D02G389500 , TraesCS7D02G389500 , TraesCS3D02G010500 , TraesCS3B02G000600 , TraesCS7B02G296100 , TraesCS7B02G296000 , TraesCS1B02G345400 , TraesCS5A02G405700 , TraesCS5A02G405700 , TraesCS5D02G415700 , TraesCS5D02G415700 , TraesCS1A02G331800 , TraesCS5B02G410400 , TraesCS5B02G410400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G149500 expressed protein -
2 Sobic.002G158401 - -
3 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
4 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
5 Sobic.004G093100 protein kinase family protein, putative, expressed -
6 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
7 Sobic.010G128350 - -
8 Sobic.008G073500 AAA-type ATPase family protein, putative, expressed -
9 Sobic.010G238300 - -
10 Sobic.010G010201 - -
11 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
12 Sobic.005G020600 Mad3/BUB1 homology region 1 domain containing protein, expressed -
13 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
14 Sobic.009G098700 basic helix-loop-helix domain containing protein, expressed -
15 Sobic.002G299500 expressed protein -
16 Sobic.001G359000 expressed protein -
17 Sobic.010G215400 expressed protein -
18 Sobic.010G048966 - -
19 Sobic.001G380700 bZIP transcription factor family protein, putative, expressed -
20 Sobic.009G168100 expressed protein -


Gene co-expression network
sample Sobic002G022700 Sobic002G022700 Sobic004G149500 Sobic004G149500 Sobic002G022700--Sobic004G149500 Sobic002G158401 Sobic002G158401 Sobic002G022700--Sobic002G158401 Sobic001G435700 Sobic001G435700 Sobic002G022700--Sobic001G435700 Sobic003G376900 Sobic003G376900 Sobic002G022700--Sobic003G376900 Sobic004G093100 Sobic004G093100 Sobic002G022700--Sobic004G093100 Sobic001G385300 Sobic001G385300 Sobic002G022700--Sobic001G385300 Sobic010G128350 Sobic010G128350 Sobic002G022700--Sobic010G128350 Sobic008G073500 Sobic008G073500 Sobic002G022700--Sobic008G073500 Sobic010G238300 Sobic010G238300 Sobic002G022700--Sobic010G238300 Sobic004G149500--Sobic002G158401 Sobic004G149500--Sobic010G238300 Sobic004G149500--Sobic004G093100 Sobic001G359000 Sobic001G359000 Sobic004G149500--Sobic001G359000 Sobic002G121450 Sobic002G121450 Sobic004G149500--Sobic002G121450 Sobic004G158600 Sobic004G158600 Sobic004G149500--Sobic004G158600 Sobic004G149500--Sobic001G435700 Sobic010G253600 Sobic010G253600 Sobic004G149500--Sobic010G253600 Sobic004G149500--Sobic002G022700 Sobic002G158401--Sobic004G149500 Sobic002G158401--Sobic010G238300 Sobic002G158401--Sobic004G093100 Sobic002G158401--Sobic001G359000 Sobic002G158401--Sobic002G121450 Sobic002G158401--Sobic004G158600 Sobic002G158401--Sobic001G435700 Sobic002G158401--Sobic010G253600 Sobic002G158401--Sobic002G022700 Sobic008G171900 Sobic008G171900 Sobic001G435700--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic001G435700--Sobic009G163100 Sobic008G156600 Sobic008G156600 Sobic001G435700--Sobic008G156600 Sobic001G435700--Sobic004G093100 Sobic005G020600 Sobic005G020600 Sobic001G435700--Sobic005G020600 Sobic004G241300 Sobic004G241300 Sobic001G435700--Sobic004G241300 Sobic001G435700--Sobic003G376900 Sobic005G050400 Sobic005G050400 Sobic001G435700--Sobic005G050400 Sobic001G435700--Sobic010G238300 Sobic002G299500 Sobic002G299500 Sobic003G376900--Sobic002G299500 Sobic003G376900--Sobic009G163100 Sobic003G352900 Sobic003G352900 Sobic003G376900--Sobic003G352900 Sobic003G376900--Sobic008G171900 Sobic003G376900--Sobic001G385300 Sobic003G376900--Sobic005G020600 Sobic003G376900--Sobic001G435700 Sobic005G045800 Sobic005G045800 Sobic003G376900--Sobic005G045800 Sobic001G072000 Sobic001G072000 Sobic003G376900--Sobic001G072000 Sobic008G071400 Sobic008G071400 Sobic004G093100--Sobic008G071400 Sobic004G093100--Sobic010G238300 Sobic004G093100--Sobic010G253600 Sobic006G115700 Sobic006G115700 Sobic004G093100--Sobic006G115700 Sobic010G010201 Sobic010G010201 Sobic004G093100--Sobic010G010201 Sobic002G084700 Sobic002G084700 Sobic004G093100--Sobic002G084700 Sobic001G135800 Sobic001G135800 Sobic004G093100--Sobic001G135800 Sobic001G432200 Sobic001G432200 Sobic004G093100--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic004G093100--Sobic006G204500 Sobic001G385300--Sobic003G376900 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic001G385300--Sobic009G163100 Sobic001G385300--Sobic008G171900 Sobic001G385300--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic001G385300--Sobic007G141600 Sobic001G385300--Sobic005G020600 Sobic004G298600 Sobic004G298600 Sobic001G385300--Sobic004G298600 Sobic010G128350--Sobic010G010201 Sobic009G238650 Sobic009G238650 Sobic010G128350--Sobic009G238650 Sobic006G239500 Sobic006G239500 Sobic010G128350--Sobic006G239500 Sobic001G165901 Sobic001G165901 Sobic010G128350--Sobic001G165901 Sobic004G349600 Sobic004G349600 Sobic010G128350--Sobic004G349600 Sobic010G073900 Sobic010G073900 Sobic010G128350--Sobic010G073900 Sobic002G199800 Sobic002G199800 Sobic010G128350--Sobic002G199800 Sobic010G128350--Sobic001G432200 Sobic002G088600 Sobic002G088600 Sobic010G128350--Sobic002G088600 Sobic007G102000 Sobic007G102000 Sobic008G073500--Sobic007G102000 Sobic010G253200 Sobic010G253200 Sobic008G073500--Sobic010G253200 Sobic009G025700 Sobic009G025700 Sobic008G073500--Sobic009G025700 Sobic005G060100 Sobic005G060100 Sobic008G073500--Sobic005G060100 Sobic008G073500--Sobic001G385300 Sobic007G043700 Sobic007G043700 Sobic008G073500--Sobic007G043700 Sobic008G073500--Sobic001G435700 Sobic009G214500 Sobic009G214500 Sobic008G073500--Sobic009G214500 Sobic008G085950 Sobic008G085950 Sobic008G073500--Sobic008G085950 Sobic010G238300--Sobic010G253600 Sobic010G238300--Sobic004G093100 Sobic010G238300--Sobic010G010201 Sobic010G238300--Sobic001G135800 Sobic010G238300--Sobic006G115700 Sobic007G142801 Sobic007G142801 Sobic010G238300--Sobic007G142801 Sobic010G142401 Sobic010G142401 Sobic010G238300--Sobic010G142401 Sobic010G238300--Sobic008G071400 Sobic006G066100 Sobic006G066100 Sobic010G238300--Sobic006G066100
Octagon: transcription factors


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