Gene annotation
Transcriptome id Sobic.006G116900.1
Synonym Sb06g019820
Functional annotation AMP-binding enzyme family protein, expressed
UniProt A0A1B6PLI9
Pfam PF00199 PF13450 PF00550 PF00501
Panther DB PTHR22754 PTHR22754:SF4
NCBI CDD KOG1176; Acyl-CoA synthetase
KEGG Orthology -
Gene Ontology GO:0004096; catalase activity GO:0008152metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G20480 : AMP-dependent synthetase and ligase family protein
RAP-DB (Rice) LOC_Os04g39780.1 : AMP-binding enzyme family protein, expressed
MaizeGDB (Corn) Zm00025a011025
Brachypodium KQJ83132 , PNT61291
Barley HORVU2Hr1G082130.2 , HORVU2Hr1G082130.3 , HORVU2Hr1G082130.1 , HORVU2Hr1G082130.6 , HORVU2Hr1G082130.4 , HORVU2Hr1G082130.5
Wheat TraesCS2B02G353100 , TraesCS2D02G333600 , TraesCS2A02G329200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G158600 expressed protein -
2 Sobic.003G342500 methyltransferase, putative, expressed -
3 Sobic.002G121450 - -
4 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
5 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
6 Sobic.004G093100 protein kinase family protein, putative, expressed -
7 Sobic.010G238300 - -
8 Sobic.003G175350 - -
9 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
10 Sobic.002G158401 - -
11 Sobic.004G149500 expressed protein -
12 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
13 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
14 Sobic.005G134000 expressed protein -
15 Sobic.002G102300 - -
16 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
17 Sobic.001G135800 pentatricopeptide, putative, expressed -
18 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
19 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
20 Sobic.008G007600 - -


Gene co-expression network
sample Sobic006G116900 Sobic006G116900 Sobic004G158600 Sobic004G158600 Sobic006G116900--Sobic004G158600 Sobic003G342500 Sobic003G342500 Sobic006G116900--Sobic003G342500 Sobic002G121450 Sobic002G121450 Sobic006G116900--Sobic002G121450 Sobic009G201000 Sobic009G201000 Sobic006G116900--Sobic009G201000 Sobic003G352900 Sobic003G352900 Sobic006G116900--Sobic003G352900 Sobic004G093100 Sobic004G093100 Sobic006G116900--Sobic004G093100 Sobic010G238300 Sobic010G238300 Sobic006G116900--Sobic010G238300 Sobic003G175350 Sobic003G175350 Sobic006G116900--Sobic003G175350 Sobic005G045800 Sobic005G045800 Sobic006G116900--Sobic005G045800 Sobic001G474100 Sobic001G474100 Sobic004G158600--Sobic001G474100 Sobic004G256100 Sobic004G256100 Sobic004G158600--Sobic004G256100 Sobic007G193600 Sobic007G193600 Sobic004G158600--Sobic007G193600 Sobic001G110250 Sobic001G110250 Sobic004G158600--Sobic001G110250 Sobic004G158600--Sobic010G238300 Sobic004G298200 Sobic004G298200 Sobic004G158600--Sobic004G298200 Sobic001G099700 Sobic001G099700 Sobic004G158600--Sobic001G099700 Sobic009G047900 Sobic009G047900 Sobic004G158600--Sobic009G047900 Sobic010G090000 Sobic010G090000 Sobic004G158600--Sobic010G090000 Sobic003G342500--Sobic009G201000 Sobic003G342500--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic003G342500--Sobic001G073700 Sobic003G342500--Sobic006G116900 Sobic006G156400 Sobic006G156400 Sobic003G342500--Sobic006G156400 Sobic006G265800 Sobic006G265800 Sobic003G342500--Sobic006G265800 Sobic001G308500 Sobic001G308500 Sobic003G342500--Sobic001G308500 Sobic001G076600 Sobic001G076600 Sobic003G342500--Sobic001G076600 Sobic002G108100 Sobic002G108100 Sobic003G342500--Sobic002G108100 Sobic002G121450--Sobic010G238300 Sobic010G253600 Sobic010G253600 Sobic002G121450--Sobic010G253600 Sobic001G135800 Sobic001G135800 Sobic002G121450--Sobic001G135800 Sobic010G010201 Sobic010G010201 Sobic002G121450--Sobic010G010201 Sobic002G121450--Sobic004G093100 Sobic007G142801 Sobic007G142801 Sobic002G121450--Sobic007G142801 Sobic006G115700 Sobic006G115700 Sobic002G121450--Sobic006G115700 Sobic010G142401 Sobic010G142401 Sobic002G121450--Sobic010G142401 Sobic001G172100 Sobic001G172100 Sobic002G121450--Sobic001G172100 Sobic009G201000--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic009G201000--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic009G201000--Sobic001G384200 Sobic002G362500 Sobic002G362500 Sobic009G201000--Sobic002G362500 Sobic001G072000 Sobic001G072000 Sobic009G201000--Sobic001G072000 Sobic009G201000--Sobic006G265800 Sobic001G322400 Sobic001G322400 Sobic009G201000--Sobic001G322400 Sobic007G039200 Sobic007G039200 Sobic009G201000--Sobic007G039200 Sobic009G201000--Sobic006G156400 Sobic007G144100 Sobic007G144100 Sobic003G352900--Sobic007G144100 Sobic002G299500 Sobic002G299500 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic001G385300 Sobic001G385300 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic008G071400 Sobic008G071400 Sobic004G093100--Sobic008G071400 Sobic004G093100--Sobic010G238300 Sobic004G093100--Sobic010G253600 Sobic004G093100--Sobic006G115700 Sobic004G093100--Sobic010G010201 Sobic002G084700 Sobic002G084700 Sobic004G093100--Sobic002G084700 Sobic004G093100--Sobic001G135800 Sobic001G432200 Sobic001G432200 Sobic004G093100--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic004G093100--Sobic006G204500 Sobic010G238300--Sobic010G253600 Sobic010G238300--Sobic004G093100 Sobic010G238300--Sobic010G010201 Sobic010G238300--Sobic001G135800 Sobic010G238300--Sobic006G115700 Sobic010G238300--Sobic007G142801 Sobic010G238300--Sobic010G142401 Sobic010G238300--Sobic008G071400 Sobic006G066100 Sobic006G066100 Sobic010G238300--Sobic006G066100 Sobic001G340800 Sobic001G340800 Sobic003G175350--Sobic001G340800 Sobic008G071800 Sobic008G071800 Sobic003G175350--Sobic008G071800 Sobic003G175350--Sobic001G384200 Sobic002G364700 Sobic002G364700 Sobic003G175350--Sobic002G364700 Sobic002G099700 Sobic002G099700 Sobic003G175350--Sobic002G099700 Sobic001G370400 Sobic001G370400 Sobic003G175350--Sobic001G370400 Sobic002G101600 Sobic002G101600 Sobic003G175350--Sobic002G101600 Sobic001G136000 Sobic001G136000 Sobic003G175350--Sobic001G136000 Sobic009G061500 Sobic009G061500 Sobic003G175350--Sobic009G061500 Sobic005G045800--Sobic003G352900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic005G045800--Sobic002G299500 Sobic001G131900 Sobic001G131900 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic005G045800--Sobic009G163100 Sobic005G045800--Sobic007G144100
Octagon: transcription factors


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