Gene annotation
Transcriptome id Sobic.005G134000.1
Synonym Sb05g019790
Functional annotation expressed protein
UniProt C5Y3C4
Pfam PF12576
Panther DB PTHR33645 PTHR33645:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19340 : Protein of unknown function (DUF3754)
RAP-DB (Rice) LOC_Os11g32490.1 : expressed protein
MaizeGDB (Corn) Zm00025a048398 , Zm00025a054122 , Zm00025a015688
Brachypodium PNT63556 , KQJ86733 , KQJ86734 , KQJ88365
Barley HORVU5Hr1G035540.10 , HORVU5Hr1G035540.11 , HORVU5Hr1G035540.12 , HORVU5Hr1G035540.13 , HORVU5Hr1G035540.14 , HORVU5Hr1G035540.15 , HORVU5Hr1G035540.16 , HORVU5Hr1G035540.17 , HORVU5Hr1G035540.18 , HORVU5Hr1G035540.19 , HORVU5Hr1G035540.2 , HORVU5Hr1G035540.3 , HORVU5Hr1G035540.1 , HORVU5Hr1G035540.6 , HORVU5Hr1G035540.7 , HORVU5Hr1G035540.4 , HORVU5Hr1G035540.8 , HORVU5Hr1G035540.9
Wheat TraesCS5D02G452700 , TraesCS5D02G122300 , TraesCS5B02G449700 , TraesCS5A02G103500 , TraesCS5A02G447400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G175350 - -
2 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
3 Sobic.007G101600 - -
4 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.002G102300 - -
6 Sobic.002G418300 vacuolar-sorting receptor precursor, putative, expressed -
7 Sobic.007G138000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
8 Sobic.008G057600 WD-40 repeat family protein, putative, expressed -
9 Sobic.002G121450 - -
10 Sobic.002G099700 OsFBX195 - F-box domain containing protein, expressed -
11 Sobic.002G304801 - -
12 Sobic.006G162500 - -
13 Sobic.003G211800 expressed protein -
14 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
15 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.002G257001 - K13947: auxin efflux carrier family protein
17 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
18 Sobic.001G220500 CK1_CaseinKinase_1.9 - CK1 includes the casein kinase 1 kinases, expressed -
19 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
20 Sobic.008G071800 - -


Gene co-expression network
sample Sobic005G134000 Sobic005G134000 Sobic003G175350 Sobic003G175350 Sobic005G134000--Sobic003G175350 Sobic004G074900 Sobic004G074900 Sobic005G134000--Sobic004G074900 Sobic007G101600 Sobic007G101600 Sobic005G134000--Sobic007G101600 Sobic001G384200 Sobic001G384200 Sobic005G134000--Sobic001G384200 Sobic002G102300 Sobic002G102300 Sobic005G134000--Sobic002G102300 Sobic002G418300 Sobic002G418300 Sobic005G134000--Sobic002G418300 Sobic007G138000 Sobic007G138000 Sobic005G134000--Sobic007G138000 Sobic008G057600 Sobic008G057600 Sobic005G134000--Sobic008G057600 Sobic002G121450 Sobic002G121450 Sobic005G134000--Sobic002G121450 Sobic001G340800 Sobic001G340800 Sobic003G175350--Sobic001G340800 Sobic008G071800 Sobic008G071800 Sobic003G175350--Sobic008G071800 Sobic003G175350--Sobic001G384200 Sobic002G364700 Sobic002G364700 Sobic003G175350--Sobic002G364700 Sobic002G099700 Sobic002G099700 Sobic003G175350--Sobic002G099700 Sobic001G370400 Sobic001G370400 Sobic003G175350--Sobic001G370400 Sobic002G101600 Sobic002G101600 Sobic003G175350--Sobic002G101600 Sobic001G136000 Sobic001G136000 Sobic003G175350--Sobic001G136000 Sobic009G061500 Sobic009G061500 Sobic003G175350--Sobic009G061500 Sobic004G074900--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic004G074900--Sobic008G141600 Sobic003G238250 Sobic003G238250 Sobic004G074900--Sobic003G238250 Sobic004G074900--Sobic002G102300 Sobic001G286900 Sobic001G286900 Sobic004G074900--Sobic001G286900 Sobic006G267100 Sobic006G267100 Sobic004G074900--Sobic006G267100 Sobic004G038500 Sobic004G038500 Sobic004G074900--Sobic004G038500 Sobic004G074900--Sobic007G138000 Sobic010G006800 Sobic010G006800 Sobic004G074900--Sobic010G006800 Sobic007G101600--Sobic001G286900 Sobic007G101600--Sobic007G138000 Sobic005G135100 Sobic005G135100 Sobic007G101600--Sobic005G135100 Sobic007G101600--Sobic003G238250 Sobic002G257001 Sobic002G257001 Sobic007G101600--Sobic002G257001 Sobic004G042501 Sobic004G042501 Sobic007G101600--Sobic004G042501 Sobic007G101600--Sobic010G006800 Sobic002G106600 Sobic002G106600 Sobic007G101600--Sobic002G106600 Sobic007G070900 Sobic007G070900 Sobic007G101600--Sobic007G070900 Sobic003G024100 Sobic003G024100 Sobic001G384200--Sobic003G024100 Sobic001G384200--Sobic001G340800 Sobic008G166100 Sobic008G166100 Sobic001G384200--Sobic008G166100 Sobic009G178400 Sobic009G178400 Sobic001G384200--Sobic009G178400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G432200 Sobic001G432200 Sobic001G384200--Sobic001G432200 Sobic001G384200--Sobic003G175350 Sobic007G039200 Sobic007G039200 Sobic001G384200--Sobic007G039200 Sobic002G102300--Sobic010G006800 Sobic002G102300--Sobic007G101600 Sobic002G102300--Sobic003G238250 Sobic001G490950 Sobic001G490950 Sobic002G102300--Sobic001G490950 Sobic002G102300--Sobic004G074900 Sobic003G392275 Sobic003G392275 Sobic002G102300--Sobic003G392275 Sobic004G140400 Sobic004G140400 Sobic002G102300--Sobic004G140400 Sobic002G102300--Sobic001G286900 Sobic002G102300--Sobic007G138000 Sobic001G417700 Sobic001G417700 Sobic002G418300--Sobic001G417700 Sobic007G094700 Sobic007G094700 Sobic002G418300--Sobic007G094700 Sobic003G133600 Sobic003G133600 Sobic002G418300--Sobic003G133600 Sobic004G203150 Sobic004G203150 Sobic002G418300--Sobic004G203150 Sobic001G029300 Sobic001G029300 Sobic002G418300--Sobic001G029300 Sobic002G418300--Sobic002G101600 Sobic004G328200 Sobic004G328200 Sobic002G418300--Sobic004G328200 Sobic002G189500 Sobic002G189500 Sobic002G418300--Sobic002G189500 Sobic008G155700 Sobic008G155700 Sobic002G418300--Sobic008G155700 Sobic007G138000--Sobic004G042501 Sobic007G138000--Sobic007G070900 Sobic007G138000--Sobic002G106600 Sobic004G180100 Sobic004G180100 Sobic007G138000--Sobic004G180100 Sobic005G003700 Sobic005G003700 Sobic007G138000--Sobic005G003700 Sobic007G138000--Sobic005G135100 Sobic002G340600 Sobic002G340600 Sobic007G138000--Sobic002G340600 Sobic001G357400 Sobic001G357400 Sobic007G138000--Sobic001G357400 Sobic007G138000--Sobic007G101600 Sobic002G304801 Sobic002G304801 Sobic008G057600--Sobic002G304801 Sobic010G141201 Sobic010G141201 Sobic008G057600--Sobic010G141201 Sobic008G056800 Sobic008G056800 Sobic008G057600--Sobic008G056800 Sobic010G064200 Sobic010G064200 Sobic008G057600--Sobic010G064200 Sobic002G188300 Sobic002G188300 Sobic008G057600--Sobic002G188300 Sobic002G204500 Sobic002G204500 Sobic008G057600--Sobic002G204500 Sobic001G226900 Sobic001G226900 Sobic008G057600--Sobic001G226900 Sobic008G057600--Sobic002G099700 Sobic006G170500 Sobic006G170500 Sobic008G057600--Sobic006G170500 Sobic010G238300 Sobic010G238300 Sobic002G121450--Sobic010G238300 Sobic010G253600 Sobic010G253600 Sobic002G121450--Sobic010G253600 Sobic001G135800 Sobic001G135800 Sobic002G121450--Sobic001G135800 Sobic010G010201 Sobic010G010201 Sobic002G121450--Sobic010G010201 Sobic004G093100 Sobic004G093100 Sobic002G121450--Sobic004G093100 Sobic007G142801 Sobic007G142801 Sobic002G121450--Sobic007G142801 Sobic006G115700 Sobic006G115700 Sobic002G121450--Sobic006G115700 Sobic010G142401 Sobic010G142401 Sobic002G121450--Sobic010G142401 Sobic001G172100 Sobic001G172100 Sobic002G121450--Sobic001G172100
Octagon: transcription factors


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