Gene annotation
Transcriptome id Sobic.002G121450.1
Synonym -
Functional annotation -
UniProt A0A1W0W3G4
Pfam -
Panther DB PTHR32133 PTHR32133:SF116
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g41560.1 : OsFBX427 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G238300 - -
2 Sobic.010G253600 OsFBL18 - F-box domain and LRR containing protein, expressed -
3 Sobic.001G135800 pentatricopeptide, putative, expressed -
4 Sobic.010G010201 - -
5 Sobic.004G093100 protein kinase family protein, putative, expressed -
6 Sobic.007G142801 - -
7 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
8 Sobic.010G142401 - -
9 Sobic.001G172100 - -
10 Sobic.006G066100 conserved hypothetical protein -
11 Sobic.008G071400 no apical meristem protein, putative, expressed -
12 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
13 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
14 Sobic.003G297100 expressed protein -
15 Sobic.002G000200 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
16 Sobic.004G136100 - -
17 Sobic.008G165401 - -
18 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
19 Sobic.001G194800 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
20 Sobic.001G110250 - -


Gene co-expression network
sample Sobic002G121450 Sobic002G121450 Sobic010G238300 Sobic010G238300 Sobic002G121450--Sobic010G238300 Sobic010G253600 Sobic010G253600 Sobic002G121450--Sobic010G253600 Sobic001G135800 Sobic001G135800 Sobic002G121450--Sobic001G135800 Sobic010G010201 Sobic010G010201 Sobic002G121450--Sobic010G010201 Sobic004G093100 Sobic004G093100 Sobic002G121450--Sobic004G093100 Sobic007G142801 Sobic007G142801 Sobic002G121450--Sobic007G142801 Sobic006G115700 Sobic006G115700 Sobic002G121450--Sobic006G115700 Sobic010G142401 Sobic010G142401 Sobic002G121450--Sobic010G142401 Sobic001G172100 Sobic001G172100 Sobic002G121450--Sobic001G172100 Sobic010G238300--Sobic010G253600 Sobic010G238300--Sobic004G093100 Sobic010G238300--Sobic010G010201 Sobic010G238300--Sobic001G135800 Sobic010G238300--Sobic006G115700 Sobic010G238300--Sobic007G142801 Sobic010G238300--Sobic010G142401 Sobic008G071400 Sobic008G071400 Sobic010G238300--Sobic008G071400 Sobic006G066100 Sobic006G066100 Sobic010G238300--Sobic006G066100 Sobic010G253600--Sobic010G238300 Sobic010G253600--Sobic001G135800 Sobic010G253600--Sobic007G142801 Sobic010G253600--Sobic010G142401 Sobic010G253600--Sobic006G115700 Sobic010G253600--Sobic010G010201 Sobic010G253600--Sobic001G172100 Sobic003G297100 Sobic003G297100 Sobic010G253600--Sobic003G297100 Sobic005G002100 Sobic005G002100 Sobic010G253600--Sobic005G002100 Sobic001G135800--Sobic006G115700 Sobic001G135800--Sobic007G142801 Sobic001G135800--Sobic003G297100 Sobic001G135800--Sobic001G172100 Sobic005G026700 Sobic005G026700 Sobic001G135800--Sobic005G026700 Sobic003G164400 Sobic003G164400 Sobic001G135800--Sobic003G164400 Sobic002G000200 Sobic002G000200 Sobic001G135800--Sobic002G000200 Sobic001G135800--Sobic005G002100 Sobic009G061500 Sobic009G061500 Sobic001G135800--Sobic009G061500 Sobic010G128350 Sobic010G128350 Sobic010G010201--Sobic010G128350 Sobic001G432200 Sobic001G432200 Sobic010G010201--Sobic001G432200 Sobic010G010201--Sobic010G253600 Sobic010G010201--Sobic007G142801 Sobic002G088600 Sobic002G088600 Sobic010G010201--Sobic002G088600 Sobic003G093100 Sobic003G093100 Sobic010G010201--Sobic003G093100 Sobic001G165901 Sobic001G165901 Sobic010G010201--Sobic001G165901 Sobic010G010201--Sobic001G135800 Sobic010G010201--Sobic001G172100 Sobic004G093100--Sobic008G071400 Sobic004G093100--Sobic010G238300 Sobic004G093100--Sobic010G253600 Sobic004G093100--Sobic006G115700 Sobic004G093100--Sobic010G010201 Sobic002G084700 Sobic002G084700 Sobic004G093100--Sobic002G084700 Sobic004G093100--Sobic001G135800 Sobic004G093100--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic004G093100--Sobic006G204500 Sobic007G142801--Sobic001G172100 Sobic007G142801--Sobic003G297100 Sobic007G142801--Sobic005G026700 Sobic007G142801--Sobic005G002100 Sobic007G142801--Sobic003G164400 Sobic007G142801--Sobic002G000200 Sobic007G131000 Sobic007G131000 Sobic007G142801--Sobic007G131000 Sobic005G214800 Sobic005G214800 Sobic007G142801--Sobic005G214800 Sobic001G246001 Sobic001G246001 Sobic007G142801--Sobic001G246001 Sobic006G115700--Sobic003G297100 Sobic006G115700--Sobic007G142801 Sobic006G115700--Sobic001G135800 Sobic002G364700 Sobic002G364700 Sobic006G115700--Sobic002G364700 Sobic009G061601 Sobic009G061601 Sobic006G115700--Sobic009G061601 Sobic006G115700--Sobic001G432200 Sobic005G176700 Sobic005G176700 Sobic006G115700--Sobic005G176700 Sobic006G115700--Sobic006G204500 Sobic001G370400 Sobic001G370400 Sobic006G115700--Sobic001G370400 Sobic010G142401--Sobic007G142801 Sobic010G142401--Sobic001G172100 Sobic010G142401--Sobic005G002100 Sobic010G142401--Sobic005G026700 Sobic010G142401--Sobic003G164400 Sobic010G142401--Sobic002G000200 Sobic010G142401--Sobic003G297100 Sobic005G187600 Sobic005G187600 Sobic010G142401--Sobic005G187600 Sobic003G111000 Sobic003G111000 Sobic010G142401--Sobic003G111000 Sobic001G172100--Sobic005G026700 Sobic001G172100--Sobic005G002100 Sobic001G172100--Sobic003G164400 Sobic001G172100--Sobic007G142801 Sobic001G172100--Sobic002G000200 Sobic001G094700 Sobic001G094700 Sobic001G172100--Sobic001G094700
Octagon: transcription factors


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