Gene annotation
Transcriptome id Sobic.008G140600.1
Synonym Sb08g019130
Functional annotation targeting protein for Xklp2 containing protein, expressed
UniProt A0A1B6PDK4
Pfam PF06886
Panther DB PTHR14326
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005874; microtubule GO:0005819spindle


Orthologs (automatic annotation)
TAIR AT5G15510 : TPX2 (targeting protein for Xklp2) protein family
RAP-DB (Rice) LOC_Os12g38790.1 : targeting protein for Xklp2 containing protein, expressed
MaizeGDB (Corn) Zm00025a004302 , Zm00025a025392
Brachypodium PNT62464 , PNT62463
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G377300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
2 Sobic.009G168100 expressed protein -
3 Sobic.003G102100 expressed protein -
4 Sobic.010G090000 syntaxin, putative, expressed K08488: syntaxin 7
5 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
6 Sobic.008G104000 cyclin, putative, expressed K06627: cyclin-A
7 Sobic.007G141600 ZOS8-05 - C2H2 zinc finger protein, expressed -
8 Sobic.010G261800 OsMADS16 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
9 Sobic.002G322700 expressed protein -
10 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
11 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
12 Sobic.002G151500 R-interacting factor 1, putative, expressed -
13 Sobic.008G188800 ankyrin repeat domain-containing protein, putative, expressed -
14 Sobic.006G152700 - -
15 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
16 Sobic.001G359000 expressed protein -
17 Sobic.002G052800 FAR1 family protein, expressed -
18 Sobic.009G142500 OsMADS4 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
19 Sobic.008G124600 expressed protein -
20 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -


Gene co-expression network
sample Sobic008G140600 Sobic008G140600 Sobic003G377300 Sobic003G377300 Sobic008G140600--Sobic003G377300 Sobic009G168100 Sobic009G168100 Sobic008G140600--Sobic009G168100 Sobic003G102100 Sobic003G102100 Sobic008G140600--Sobic003G102100 Sobic010G090000 Sobic010G090000 Sobic008G140600--Sobic010G090000 Sobic005G045800 Sobic005G045800 Sobic008G140600--Sobic005G045800 Sobic008G104000 Sobic008G104000 Sobic008G140600--Sobic008G104000 Sobic007G141600 Sobic007G141600 Sobic008G140600--Sobic007G141600 Sobic010G261800 Sobic010G261800 Sobic008G140600--Sobic010G261800 Sobic002G322700 Sobic002G322700 Sobic008G140600--Sobic002G322700 Sobic003G377300--Sobic008G140600 Sobic009G142500 Sobic009G142500 Sobic003G377300--Sobic009G142500 Sobic003G377300--Sobic010G261800 Sobic002G151500 Sobic002G151500 Sobic003G377300--Sobic002G151500 Sobic003G377300--Sobic010G090000 Sobic003G377300--Sobic007G141600 Sobic006G152700 Sobic006G152700 Sobic003G377300--Sobic006G152700 Sobic003G379000 Sobic003G379000 Sobic003G377300--Sobic003G379000 Sobic003G377300--Sobic009G168100 Sobic009G168100--Sobic008G140600 Sobic001G359000 Sobic001G359000 Sobic009G168100--Sobic001G359000 Sobic009G168100--Sobic005G045800 Sobic008G073500 Sobic008G073500 Sobic009G168100--Sobic008G073500 Sobic009G168100--Sobic010G090000 Sobic003G376900 Sobic003G376900 Sobic009G168100--Sobic003G376900 Sobic009G168100--Sobic003G377300 Sobic003G177600 Sobic003G177600 Sobic009G168100--Sobic003G177600 Sobic001G385300 Sobic001G385300 Sobic009G168100--Sobic001G385300 Sobic003G102100--Sobic010G090000 Sobic003G018000 Sobic003G018000 Sobic003G102100--Sobic003G018000 Sobic008G124600 Sobic008G124600 Sobic003G102100--Sobic008G124600 Sobic004G256100 Sobic004G256100 Sobic003G102100--Sobic004G256100 Sobic001G474100 Sobic001G474100 Sobic003G102100--Sobic001G474100 Sobic004G158600 Sobic004G158600 Sobic003G102100--Sobic004G158600 Sobic001G502100 Sobic001G502100 Sobic003G102100--Sobic001G502100 Sobic007G193600 Sobic007G193600 Sobic003G102100--Sobic007G193600 Sobic001G103600 Sobic001G103600 Sobic003G102100--Sobic001G103600 Sobic010G090000--Sobic004G256100 Sobic010G090000--Sobic010G261800 Sobic010G090000--Sobic001G474100 Sobic010G090000--Sobic007G193600 Sobic010G090000--Sobic003G102100 Sobic010G090000--Sobic001G103600 Sobic010G090000--Sobic001G502100 Sobic010G090000--Sobic003G018000 Sobic002G123400 Sobic002G123400 Sobic010G090000--Sobic002G123400 Sobic003G352900 Sobic003G352900 Sobic005G045800--Sobic003G352900 Sobic005G045800--Sobic003G376900 Sobic005G045800--Sobic001G385300 Sobic002G299500 Sobic002G299500 Sobic005G045800--Sobic002G299500 Sobic001G131900 Sobic001G131900 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic005G045800--Sobic009G163100 Sobic007G144100 Sobic007G144100 Sobic005G045800--Sobic007G144100 Sobic003G423700 Sobic003G423700 Sobic008G104000--Sobic003G423700 Sobic004G241300 Sobic004G241300 Sobic008G104000--Sobic004G241300 Sobic010G253200 Sobic010G253200 Sobic008G104000--Sobic010G253200 Sobic010G182000 Sobic010G182000 Sobic008G104000--Sobic010G182000 Sobic002G420100 Sobic002G420100 Sobic008G104000--Sobic002G420100 Sobic001G126800 Sobic001G126800 Sobic008G104000--Sobic001G126800 Sobic001G248400 Sobic001G248400 Sobic008G104000--Sobic001G248400 Sobic008G156600 Sobic008G156600 Sobic008G104000--Sobic008G156600 Sobic008G104000--Sobic008G171900 Sobic007G141600--Sobic002G299500 Sobic007G141600--Sobic001G385300 Sobic007G141600--Sobic008G171900 Sobic008G007600 Sobic008G007600 Sobic007G141600--Sobic008G007600 Sobic007G141600--Sobic003G352900 Sobic001G076600 Sobic001G076600 Sobic007G141600--Sobic001G076600 Sobic007G141600--Sobic009G163100 Sobic007G141600--Sobic007G144100 Sobic006G265800 Sobic006G265800 Sobic007G141600--Sobic006G265800 Sobic010G261800--Sobic010G090000 Sobic006G256400 Sobic006G256400 Sobic010G261800--Sobic006G256400 Sobic010G261800--Sobic002G123400 Sobic005G006900 Sobic005G006900 Sobic010G261800--Sobic005G006900 Sobic003G090200 Sobic003G090200 Sobic010G261800--Sobic003G090200 Sobic002G100300 Sobic002G100300 Sobic010G261800--Sobic002G100300 Sobic005G212300 Sobic005G212300 Sobic010G261800--Sobic005G212300 Sobic003G354850 Sobic003G354850 Sobic010G261800--Sobic003G354850 Sobic002G121100 Sobic002G121100 Sobic010G261800--Sobic002G121100 Sobic010G009700 Sobic010G009700 Sobic002G322700--Sobic010G009700 Sobic002G322700--Sobic005G045800 Sobic007G146200 Sobic007G146200 Sobic002G322700--Sobic007G146200 Sobic002G322700--Sobic001G131900 Sobic002G322700--Sobic008G140600 Sobic002G322700--Sobic001G385300 Sobic007G105700 Sobic007G105700 Sobic002G322700--Sobic007G105700 Sobic009G066200 Sobic009G066200 Sobic002G322700--Sobic009G066200 Sobic008G188800 Sobic008G188800 Sobic002G322700--Sobic008G188800
Octagon: transcription factors


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