Gene annotation
Transcriptome id Sobic.007G102300.1
Synonym Sb07g012940
Functional annotation formin, putative, expressed
UniProt C5YK33
Pfam -
Panther DB PTHR23213 PTHR23213:SF190
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G32400 : Actin-binding FH2/DRF autoregulatory protein
RAP-DB (Rice) LOC_Os02g55150.2 : formin, putative, expressed
MaizeGDB (Corn) Zm00025a030651
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
2 Sobic.005G060100 growth regulator related protein, putative, expressed -
3 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
4 Sobic.009G220700 - -
5 Sobic.003G217800 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
6 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
7 Sobic.003G216600 BAH domain containing protein, expressed -
8 Sobic.002G299500 expressed protein -
9 Sobic.003G005500 B3 DNA binding domain containing protein, expressed -
10 Sobic.004G062600 OsFBX154 - F-box domain containing protein, expressed -
11 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
12 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
13 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
14 Sobic.007G102000 formin-like protein 13, putative, expressed -
15 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
16 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
17 Sobic.002G339666 - K04718: sphingosine kinase
18 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
19 Sobic.008G171900 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
20 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C


Gene co-expression network
sample Sobic007G102300 Sobic007G102300 Sobic009G214500 Sobic009G214500 Sobic007G102300--Sobic009G214500 Sobic005G060100 Sobic005G060100 Sobic007G102300--Sobic005G060100 Sobic001G385300 Sobic001G385300 Sobic007G102300--Sobic001G385300 Sobic009G220700 Sobic009G220700 Sobic007G102300--Sobic009G220700 Sobic003G217800 Sobic003G217800 Sobic007G102300--Sobic003G217800 Sobic003G352900 Sobic003G352900 Sobic007G102300--Sobic003G352900 Sobic003G216600 Sobic003G216600 Sobic007G102300--Sobic003G216600 Sobic002G299500 Sobic002G299500 Sobic007G102300--Sobic002G299500 Sobic003G005500 Sobic003G005500 Sobic007G102300--Sobic003G005500 Sobic009G214500--Sobic007G102300 Sobic009G214500--Sobic001G385300 Sobic007G102000 Sobic007G102000 Sobic009G214500--Sobic007G102000 Sobic009G163100 Sobic009G163100 Sobic009G214500--Sobic009G163100 Sobic001G327100 Sobic001G327100 Sobic009G214500--Sobic001G327100 Sobic001G380700 Sobic001G380700 Sobic009G214500--Sobic001G380700 Sobic003G376900 Sobic003G376900 Sobic009G214500--Sobic003G376900 Sobic004G241300 Sobic004G241300 Sobic009G214500--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic009G214500--Sobic003G423700 Sobic007G105700 Sobic007G105700 Sobic005G060100--Sobic007G105700 Sobic005G060100--Sobic007G102300 Sobic005G060100--Sobic001G385300 Sobic005G060100--Sobic003G216600 Sobic001G433600 Sobic001G433600 Sobic005G060100--Sobic001G433600 Sobic004G298600 Sobic004G298600 Sobic005G060100--Sobic004G298600 Sobic001G117900 Sobic001G117900 Sobic005G060100--Sobic001G117900 Sobic005G060100--Sobic003G352900 Sobic001G131900 Sobic001G131900 Sobic005G060100--Sobic001G131900 Sobic001G385300--Sobic003G376900 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic001G385300--Sobic009G163100 Sobic008G171900 Sobic008G171900 Sobic001G385300--Sobic008G171900 Sobic005G045800 Sobic005G045800 Sobic001G385300--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic001G385300--Sobic007G141600 Sobic005G020600 Sobic005G020600 Sobic001G385300--Sobic005G020600 Sobic001G385300--Sobic004G298600 Sobic008G156600 Sobic008G156600 Sobic009G220700--Sobic008G156600 Sobic009G220700--Sobic009G163100 Sobic001G072000 Sobic001G072000 Sobic009G220700--Sobic001G072000 Sobic009G220700--Sobic003G217800 Sobic001G322400 Sobic001G322400 Sobic009G220700--Sobic001G322400 Sobic001G485700 Sobic001G485700 Sobic009G220700--Sobic001G485700 Sobic010G073900 Sobic010G073900 Sobic009G220700--Sobic010G073900 Sobic009G220700--Sobic003G352900 Sobic009G025700 Sobic009G025700 Sobic009G220700--Sobic009G025700 Sobic007G144100 Sobic007G144100 Sobic003G217800--Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic003G217800--Sobic003G258100 Sobic003G217800--Sobic003G352900 Sobic003G217800--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G217800--Sobic003G018000 Sobic003G217800--Sobic001G485700 Sobic003G217800--Sobic009G220700 Sobic004G062600 Sobic004G062600 Sobic003G217800--Sobic004G062600 Sobic010G263400 Sobic010G263400 Sobic003G217800--Sobic010G263400 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic001G076600 Sobic001G076600 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic003G216600--Sobic005G060100 Sobic003G216600--Sobic007G102300 Sobic010G038200 Sobic010G038200 Sobic003G216600--Sobic010G038200 Sobic010G009700 Sobic010G009700 Sobic003G216600--Sobic010G009700 Sobic003G216600--Sobic004G298600 Sobic001G248400 Sobic001G248400 Sobic003G216600--Sobic001G248400 Sobic003G216600--Sobic009G214500 Sobic010G030000 Sobic010G030000 Sobic003G216600--Sobic010G030000 Sobic008G047500 Sobic008G047500 Sobic003G216600--Sobic008G047500 Sobic002G299500--Sobic008G171900 Sobic002G299500--Sobic003G376900 Sobic002G299500--Sobic009G163100 Sobic002G299500--Sobic005G020600 Sobic002G299500--Sobic008G007600 Sobic002G299500--Sobic003G352900 Sobic004G250800 Sobic004G250800 Sobic002G299500--Sobic004G250800 Sobic009G202000 Sobic009G202000 Sobic002G299500--Sobic009G202000 Sobic002G299500--Sobic001G072000 Sobic001G010500 Sobic001G010500 Sobic003G005500--Sobic001G010500 Sobic003G005500--Sobic007G102300 Sobic009G163400 Sobic009G163400 Sobic003G005500--Sobic009G163400 Sobic003G005500--Sobic009G214500 Sobic002G339666 Sobic002G339666 Sobic003G005500--Sobic002G339666 Sobic008G141900 Sobic008G141900 Sobic003G005500--Sobic008G141900 Sobic007G122700 Sobic007G122700 Sobic003G005500--Sobic007G122700 Sobic002G286632 Sobic002G286632 Sobic003G005500--Sobic002G286632 Sobic002G309100 Sobic002G309100 Sobic003G005500--Sobic002G309100
Octagon: transcription factors


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