Gene annotation
Transcriptome id Sobic.002G339666.1
Synonym -
Functional annotation -
UniProt A0A1W0W6S5
Pfam PF00781
Panther DB PTHR12358 PTHR12358:SF42
NCBI CDD -
KEGG Orthology K04718; sphingosine kinase
Gene Ontology GO:0016301; kinase activity


Orthologs (automatic annotation)
TAIR AT4G21540 : sphingosine kinase 1
RAP-DB (Rice) LOC_Os07g37580.1 : diacylglycerol kinase, putative, expressed
MaizeGDB (Corn) Zm00025a048391 , Zm00025a014910
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G010500 frigida, putative, expressed -
2 Sobic.001G257650 - -
3 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
4 Sobic.003G009000 harpin-induced protein, putative, expressed -
5 Sobic.001G485700 DAG protein, chloroplast precursor, putative, expressed -
6 Sobic.001G130600 galactosyltransferase family protein, putative, expressed -
7 Sobic.007G102300 formin, putative, expressed -
8 Sobic.009G098700 basic helix-loop-helix domain containing protein, expressed -
9 Sobic.003G005500 B3 DNA binding domain containing protein, expressed -
10 Sobic.009G163400 growth regulator related protein, putative, expressed -
11 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
12 Sobic.003G407700 dnaJ domain containing protein, expressed -
13 Sobic.010G073900 expressed protein -
14 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
15 Sobic.002G199800 - -
16 Sobic.001G183666 - -
17 Sobic.005G060100 growth regulator related protein, putative, expressed -
18 Sobic.009G220700 - -
19 Sobic.006G050100 expressed protein -
20 Sobic.010G252100 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G339666 Sobic002G339666 Sobic001G010500 Sobic001G010500 Sobic002G339666--Sobic001G010500 Sobic001G257650 Sobic001G257650 Sobic002G339666--Sobic001G257650 Sobic002G309100 Sobic002G309100 Sobic002G339666--Sobic002G309100 Sobic003G009000 Sobic003G009000 Sobic002G339666--Sobic003G009000 Sobic001G485700 Sobic001G485700 Sobic002G339666--Sobic001G485700 Sobic001G130600 Sobic001G130600 Sobic002G339666--Sobic001G130600 Sobic007G102300 Sobic007G102300 Sobic002G339666--Sobic007G102300 Sobic009G098700 Sobic009G098700 Sobic002G339666--Sobic009G098700 Sobic003G005500 Sobic003G005500 Sobic002G339666--Sobic003G005500 Sobic009G163400 Sobic009G163400 Sobic001G010500--Sobic009G163400 Sobic001G010500--Sobic002G309100 Sobic001G376501 Sobic001G376501 Sobic001G010500--Sobic001G376501 Sobic008G141900 Sobic008G141900 Sobic001G010500--Sobic008G141900 Sobic001G010500--Sobic001G257650 Sobic001G010500--Sobic003G009000 Sobic001G010500--Sobic001G130600 Sobic008G121501 Sobic008G121501 Sobic001G010500--Sobic008G121501 Sobic001G010500--Sobic003G005500 Sobic001G257650--Sobic003G009000 Sobic001G257650--Sobic001G376501 Sobic001G257650--Sobic002G309100 Sobic001G257650--Sobic009G163400 Sobic001G257650--Sobic008G121501 Sobic001G257650--Sobic001G010500 Sobic002G064800 Sobic002G064800 Sobic001G257650--Sobic002G064800 Sobic001G257650--Sobic002G339666 Sobic001G257650--Sobic009G098700 Sobic010G062900 Sobic010G062900 Sobic002G309100--Sobic010G062900 Sobic002G309100--Sobic003G009000 Sobic002G309100--Sobic001G010500 Sobic002G309100--Sobic009G163400 Sobic002G309100--Sobic009G098700 Sobic002G309100--Sobic001G485700 Sobic002G309100--Sobic001G257650 Sobic002G309100--Sobic008G121501 Sobic002G309100--Sobic001G130600 Sobic003G009000--Sobic009G098700 Sobic006G239500 Sobic006G239500 Sobic003G009000--Sobic006G239500 Sobic002G199800 Sobic002G199800 Sobic003G009000--Sobic002G199800 Sobic001G183666 Sobic001G183666 Sobic003G009000--Sobic001G183666 Sobic004G349600 Sobic004G349600 Sobic003G009000--Sobic004G349600 Sobic003G407700 Sobic003G407700 Sobic003G009000--Sobic003G407700 Sobic010G073900 Sobic010G073900 Sobic003G009000--Sobic010G073900 Sobic003G009000--Sobic001G257650 Sobic003G009000--Sobic001G485700 Sobic001G485700--Sobic001G130600 Sobic001G485700--Sobic010G073900 Sobic010G166800 Sobic010G166800 Sobic001G485700--Sobic010G166800 Sobic001G485700--Sobic003G407700 Sobic001G485700--Sobic003G009000 Sobic001G485700--Sobic009G098700 Sobic006G114100 Sobic006G114100 Sobic001G485700--Sobic006G114100 Sobic001G485700--Sobic002G199800 Sobic010G252100 Sobic010G252100 Sobic001G485700--Sobic010G252100 Sobic001G130600--Sobic001G485700 Sobic001G130600--Sobic006G114100 Sobic001G130600--Sobic003G009000 Sobic001G130600--Sobic009G098700 Sobic001G130600--Sobic010G166800 Sobic001G130600--Sobic003G407700 Sobic001G130600--Sobic010G252100 Sobic001G130600--Sobic001G183666 Sobic001G130600--Sobic010G073900 Sobic009G214500 Sobic009G214500 Sobic007G102300--Sobic009G214500 Sobic005G060100 Sobic005G060100 Sobic007G102300--Sobic005G060100 Sobic001G385300 Sobic001G385300 Sobic007G102300--Sobic001G385300 Sobic009G220700 Sobic009G220700 Sobic007G102300--Sobic009G220700 Sobic003G217800 Sobic003G217800 Sobic007G102300--Sobic003G217800 Sobic003G352900 Sobic003G352900 Sobic007G102300--Sobic003G352900 Sobic003G216600 Sobic003G216600 Sobic007G102300--Sobic003G216600 Sobic002G299500 Sobic002G299500 Sobic007G102300--Sobic002G299500 Sobic007G102300--Sobic003G005500 Sobic009G098700--Sobic006G239500 Sobic009G098700--Sobic002G199800 Sobic009G098700--Sobic010G073900 Sobic009G098700--Sobic003G407700 Sobic009G098700--Sobic003G009000 Sobic005G120400 Sobic005G120400 Sobic009G098700--Sobic005G120400 Sobic009G098700--Sobic004G349600 Sobic010G128350 Sobic010G128350 Sobic009G098700--Sobic010G128350 Sobic009G238650 Sobic009G238650 Sobic009G098700--Sobic009G238650 Sobic003G005500--Sobic001G010500 Sobic003G005500--Sobic007G102300 Sobic003G005500--Sobic009G163400 Sobic003G005500--Sobic009G214500 Sobic003G005500--Sobic002G339666 Sobic003G005500--Sobic008G141900 Sobic007G122700 Sobic007G122700 Sobic003G005500--Sobic007G122700 Sobic002G286632 Sobic002G286632 Sobic003G005500--Sobic002G286632 Sobic003G005500--Sobic002G309100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.