Gene annotation
Transcriptome id Sobic.001G500500.1
Synonym Sb01g046760
Functional annotation expressed protein
UniProt C5WXU7
Pfam PF07762
Panther DB PTHR33074 PTHR33074:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g39320.1 : CTR1-like protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G137400 ankyrin, putative, expressed -
2 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
3 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
4 Sobic.010G243100 RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
5 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
6 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
7 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
8 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
9 Sobic.004G313400 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
10 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
11 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
12 Sobic.006G181500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
13 Sobic.001G137500 ankyrin, putative, expressed -
14 Sobic.010G030000 leucine rich repeat protein, putative, expressed -
15 Sobic.003G027000 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
16 Sobic.005G172700 expressed protein -
17 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
18 Sobic.009G152120 - -
19 Sobic.004G218000 SET domain containing protein, expressed -
20 Sobic.003G006000 expressed protein -


Gene co-expression network
sample Sobic001G500500 Sobic001G500500 Sobic001G137400 Sobic001G137400 Sobic001G500500--Sobic001G137400 Sobic001G288000 Sobic001G288000 Sobic001G500500--Sobic001G288000 Sobic008G098700 Sobic008G098700 Sobic001G500500--Sobic008G098700 Sobic010G243100 Sobic010G243100 Sobic001G500500--Sobic010G243100 Sobic003G289700 Sobic003G289700 Sobic001G500500--Sobic003G289700 Sobic006G215800 Sobic006G215800 Sobic001G500500--Sobic006G215800 Sobic002G374200 Sobic002G374200 Sobic001G500500--Sobic002G374200 Sobic002G299200 Sobic002G299200 Sobic001G500500--Sobic002G299200 Sobic004G313400 Sobic004G313400 Sobic001G500500--Sobic004G313400 Sobic001G137500 Sobic001G137500 Sobic001G137400--Sobic001G137500 Sobic002G258000 Sobic002G258000 Sobic001G137400--Sobic002G258000 Sobic007G193300 Sobic007G193300 Sobic001G137400--Sobic007G193300 Sobic001G457600 Sobic001G457600 Sobic001G137400--Sobic001G457600 Sobic010G194600 Sobic010G194600 Sobic001G137400--Sobic010G194600 Sobic001G137400--Sobic001G288000 Sobic009G243000 Sobic009G243000 Sobic001G137400--Sobic009G243000 Sobic001G086400 Sobic001G086400 Sobic001G137400--Sobic001G086400 Sobic001G419500 Sobic001G419500 Sobic001G137400--Sobic001G419500 Sobic001G288000--Sobic001G137400 Sobic001G288000--Sobic001G137500 Sobic003G091300 Sobic003G091300 Sobic001G288000--Sobic003G091300 Sobic001G288000--Sobic002G258000 Sobic001G288000--Sobic007G193300 Sobic001G288000--Sobic002G299200 Sobic003G006000 Sobic003G006000 Sobic001G288000--Sobic003G006000 Sobic002G178700 Sobic002G178700 Sobic001G288000--Sobic002G178700 Sobic001G288000--Sobic001G419500 Sobic008G098700--Sobic006G215800 Sobic008G098700--Sobic002G299200 Sobic003G090000 Sobic003G090000 Sobic008G098700--Sobic003G090000 Sobic009G152120 Sobic009G152120 Sobic008G098700--Sobic009G152120 Sobic003G027000 Sobic003G027000 Sobic008G098700--Sobic003G027000 Sobic008G098700--Sobic001G500500 Sobic010G090700 Sobic010G090700 Sobic008G098700--Sobic010G090700 Sobic002G106200 Sobic002G106200 Sobic008G098700--Sobic002G106200 Sobic003G396500 Sobic003G396500 Sobic008G098700--Sobic003G396500 Sobic009G138300 Sobic009G138300 Sobic010G243100--Sobic009G138300 Sobic010G030000 Sobic010G030000 Sobic010G243100--Sobic010G030000 Sobic010G009700 Sobic010G009700 Sobic010G243100--Sobic010G009700 Sobic010G243100--Sobic001G500500 Sobic010G243100--Sobic003G289700 Sobic008G180400 Sobic008G180400 Sobic010G243100--Sobic008G180400 Sobic009G136000 Sobic009G136000 Sobic010G243100--Sobic009G136000 Sobic010G243100--Sobic001G288000 Sobic010G222800 Sobic010G222800 Sobic010G243100--Sobic010G222800 Sobic005G172700 Sobic005G172700 Sobic003G289700--Sobic005G172700 Sobic003G343200 Sobic003G343200 Sobic003G289700--Sobic003G343200 Sobic003G289700--Sobic010G222800 Sobic010G237800 Sobic010G237800 Sobic003G289700--Sobic010G237800 Sobic003G320100 Sobic003G320100 Sobic003G289700--Sobic003G320100 Sobic006G106200 Sobic006G106200 Sobic003G289700--Sobic006G106200 Sobic003G289700--Sobic009G138300 Sobic003G289700--Sobic010G243100 Sobic005G160200 Sobic005G160200 Sobic003G289700--Sobic005G160200 Sobic006G215800--Sobic003G090000 Sobic006G215800--Sobic003G027000 Sobic001G218600 Sobic001G218600 Sobic006G215800--Sobic001G218600 Sobic006G215800--Sobic004G313400 Sobic006G215800--Sobic003G396500 Sobic006G215800--Sobic002G299200 Sobic006G215800--Sobic008G098700 Sobic007G060100 Sobic007G060100 Sobic006G215800--Sobic007G060100 Sobic005G070301 Sobic005G070301 Sobic006G215800--Sobic005G070301 Sobic010G212700 Sobic010G212700 Sobic002G374200--Sobic010G212700 Sobic002G374200--Sobic001G500500 Sobic002G374200--Sobic010G237800 Sobic003G007200 Sobic003G007200 Sobic002G374200--Sobic003G007200 Sobic007G153700 Sobic007G153700 Sobic002G374200--Sobic007G153700 Sobic002G374200--Sobic005G160200 Sobic009G232500 Sobic009G232500 Sobic002G374200--Sobic009G232500 Sobic003G410200 Sobic003G410200 Sobic002G374200--Sobic003G410200 Sobic002G196500 Sobic002G196500 Sobic002G374200--Sobic002G196500 Sobic002G299200--Sobic003G027000 Sobic002G299200--Sobic003G090000 Sobic002G299200--Sobic003G396500 Sobic002G299200--Sobic009G152120 Sobic002G299200--Sobic001G218600 Sobic002G299200--Sobic006G215800 Sobic002G259301 Sobic002G259301 Sobic002G299200--Sobic002G259301 Sobic002G299200--Sobic001G288000 Sobic002G299200--Sobic005G070301 Sobic004G313400--Sobic003G090000 Sobic004G313400--Sobic003G027000 Sobic004G313400--Sobic001G218600 Sobic004G313400--Sobic005G070301 Sobic004G313400--Sobic006G215800 Sobic002G151500 Sobic002G151500 Sobic004G313400--Sobic002G151500 Sobic004G313400--Sobic003G396500 Sobic009G066600 Sobic009G066600 Sobic004G313400--Sobic009G066600 Sobic003G044000 Sobic003G044000 Sobic004G313400--Sobic003G044000
Octagon: transcription factors


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