Gene annotation
Transcriptome id Sobic.006G181500.3,Sobic.006G181500.2,Sobic.006G181500.1
Synonym EIF3G1, Sb06g025590, ATEIF3G1
Functional annotation RNA recognition motif containing protein, putative, expressed
UniProt A0A1B6PMF2 , C5YE20 , A0A1B6PMN9
Pfam PF12353 PF00076 PF00076 PF12353
Panther DB PTHR10352
NCBI CDD KOG0122; Translation initiation factor 3, subunit g (eIF-3g)
KEGG Orthology K03248; translation initiation factor 3 subunit G
Gene Ontology GO:0003676; nucleic acid binding GO:0005852eukaryotic translation initiation factor 3 complex GO:0005737cytoplasm GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT3G11400 : eukaryotic translation initiation factor 3G1
RAP-DB (Rice) LOC_Os02g54700.2 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a010190
Brachypodium KQK01073
Barley HORVU6Hr1G083650.1 , HORVU6Hr1G083650.3 , HORVU4Hr1G010940.4 , HORVU4Hr1G010940.5 , HORVU4Hr1G010940.2 , HORVU4Hr1G010940.3 , HORVU4Hr1G010940.1
Wheat TraesCS6B02G381600 , TraesCS4A02G248900 , TraesCS5A02G406900 , TraesCS6D02G331000 , TraesCS4D02G064800 , TraesCS4B02G065700 , TraesCS6A02G348000
Populus -


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cDNA sequences
Sobic.006G181500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G106200 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.002G108100 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
4 Sobic.003G270100 dehydrin family protein, expressed -
5 Sobic.010G090700 expressed protein -
6 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
7 Sobic.007G048900 OsFBX381 - F-box domain containing protein, expressed -
8 Sobic.001G203800 expressed protein -
9 Sobic.001G500500 expressed protein -
10 Sobic.009G066600 expressed protein -
11 Sobic.001G305900 GTP binding protein, putative, expressed -
12 Sobic.003G342500 methyltransferase, putative, expressed -
13 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
14 Sobic.004G186300 protein phosphotase protein, putative, expressed -
15 Sobic.003G044000 lipase class 3 family protein, putative, expressed -
16 Sobic.010G037800 expressed protein -
17 Sobic.007G060100 expressed protein -
18 Sobic.007G118075 - -
19 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
20 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G181500 Sobic006G181500 Sobic002G106200 Sobic002G106200 Sobic006G181500--Sobic002G106200 Sobic002G108100 Sobic002G108100 Sobic006G181500--Sobic002G108100 Sobic006G215800 Sobic006G215800 Sobic006G181500--Sobic006G215800 Sobic003G270100 Sobic003G270100 Sobic006G181500--Sobic003G270100 Sobic010G090700 Sobic010G090700 Sobic006G181500--Sobic010G090700 Sobic008G098700 Sobic008G098700 Sobic006G181500--Sobic008G098700 Sobic007G048900 Sobic007G048900 Sobic006G181500--Sobic007G048900 Sobic001G203800 Sobic001G203800 Sobic006G181500--Sobic001G203800 Sobic001G500500 Sobic001G500500 Sobic006G181500--Sobic001G500500 Sobic002G106200--Sobic007G048900 Sobic002G106200--Sobic006G215800 Sobic003G342500 Sobic003G342500 Sobic002G106200--Sobic003G342500 Sobic007G060100 Sobic007G060100 Sobic002G106200--Sobic007G060100 Sobic001G152700 Sobic001G152700 Sobic002G106200--Sobic001G152700 Sobic002G106200--Sobic006G181500 Sobic002G106200--Sobic002G108100 Sobic010G160300 Sobic010G160300 Sobic002G106200--Sobic010G160300 Sobic002G057400 Sobic002G057400 Sobic002G106200--Sobic002G057400 Sobic002G108100--Sobic003G342500 Sobic008G155400 Sobic008G155400 Sobic002G108100--Sobic008G155400 Sobic005G045800 Sobic005G045800 Sobic002G108100--Sobic005G045800 Sobic009G066200 Sobic009G066200 Sobic002G108100--Sobic009G066200 Sobic003G200000 Sobic003G200000 Sobic002G108100--Sobic003G200000 Sobic003G352900 Sobic003G352900 Sobic002G108100--Sobic003G352900 Sobic007G189100 Sobic007G189100 Sobic002G108100--Sobic007G189100 Sobic007G118050 Sobic007G118050 Sobic002G108100--Sobic007G118050 Sobic001G131900 Sobic001G131900 Sobic002G108100--Sobic001G131900 Sobic003G090000 Sobic003G090000 Sobic006G215800--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic006G215800--Sobic003G027000 Sobic001G218600 Sobic001G218600 Sobic006G215800--Sobic001G218600 Sobic004G313400 Sobic004G313400 Sobic006G215800--Sobic004G313400 Sobic003G396500 Sobic003G396500 Sobic006G215800--Sobic003G396500 Sobic002G299200 Sobic002G299200 Sobic006G215800--Sobic002G299200 Sobic006G215800--Sobic008G098700 Sobic006G215800--Sobic007G060100 Sobic005G070301 Sobic005G070301 Sobic006G215800--Sobic005G070301 Sobic003G270100--Sobic001G203800 Sobic003G308300 Sobic003G308300 Sobic003G270100--Sobic003G308300 Sobic003G255700 Sobic003G255700 Sobic003G270100--Sobic003G255700 Sobic001G050500 Sobic001G050500 Sobic003G270100--Sobic001G050500 Sobic004G186300 Sobic004G186300 Sobic003G270100--Sobic004G186300 Sobic006G100266 Sobic006G100266 Sobic003G270100--Sobic006G100266 Sobic004G328100 Sobic004G328100 Sobic003G270100--Sobic004G328100 Sobic001G305900 Sobic001G305900 Sobic003G270100--Sobic001G305900 Sobic006G208200 Sobic006G208200 Sobic003G270100--Sobic006G208200 Sobic004G346750 Sobic004G346750 Sobic010G090700--Sobic004G346750 Sobic010G090700--Sobic008G098700 Sobic010G090700--Sobic006G181500 Sobic010G090700--Sobic006G215800 Sobic010G090700--Sobic007G048900 Sobic010G090700--Sobic002G299200 Sobic010G090700--Sobic003G270100 Sobic010G090700--Sobic002G106200 Sobic003G044000 Sobic003G044000 Sobic010G090700--Sobic003G044000 Sobic008G098700--Sobic006G215800 Sobic008G098700--Sobic002G299200 Sobic008G098700--Sobic003G090000 Sobic009G152120 Sobic009G152120 Sobic008G098700--Sobic009G152120 Sobic008G098700--Sobic003G027000 Sobic008G098700--Sobic001G500500 Sobic008G098700--Sobic010G090700 Sobic008G098700--Sobic002G106200 Sobic008G098700--Sobic003G396500 Sobic001G506400 Sobic001G506400 Sobic007G048900--Sobic001G506400 Sobic007G048900--Sobic007G060100 Sobic004G168900 Sobic004G168900 Sobic007G048900--Sobic004G168900 Sobic010G263700 Sobic010G263700 Sobic007G048900--Sobic010G263700 Sobic004G038400 Sobic004G038400 Sobic007G048900--Sobic004G038400 Sobic001G034200 Sobic001G034200 Sobic007G048900--Sobic001G034200 Sobic010G263400 Sobic010G263400 Sobic007G048900--Sobic010G263400 Sobic007G048900--Sobic003G342500 Sobic007G144100 Sobic007G144100 Sobic007G048900--Sobic007G144100 Sobic001G203800--Sobic003G270100 Sobic001G203800--Sobic004G328100 Sobic001G203800--Sobic006G208200 Sobic002G037600 Sobic002G037600 Sobic001G203800--Sobic002G037600 Sobic005G048600 Sobic005G048600 Sobic001G203800--Sobic005G048600 Sobic001G080800 Sobic001G080800 Sobic001G203800--Sobic001G080800 Sobic004G215200 Sobic004G215200 Sobic001G203800--Sobic004G215200 Sobic001G203800--Sobic003G308300 Sobic001G073700 Sobic001G073700 Sobic001G203800--Sobic001G073700 Sobic001G137400 Sobic001G137400 Sobic001G500500--Sobic001G137400 Sobic001G288000 Sobic001G288000 Sobic001G500500--Sobic001G288000 Sobic001G500500--Sobic008G098700 Sobic010G243100 Sobic010G243100 Sobic001G500500--Sobic010G243100 Sobic003G289700 Sobic003G289700 Sobic001G500500--Sobic003G289700 Sobic001G500500--Sobic006G215800 Sobic002G374200 Sobic002G374200 Sobic001G500500--Sobic002G374200 Sobic001G500500--Sobic002G299200 Sobic001G500500--Sobic004G313400
Octagon: transcription factors


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