Gene annotation
Transcriptome id Sobic.001G203800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QJY2
Pfam PF12274
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g22720.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G203800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G270100 dehydrin family protein, expressed -
2 Sobic.004G328100 expressed protein -
3 Sobic.006G208200 GHMP kinases ATP-binding protein, putative, expressed K18677: galacturonokinase
4 Sobic.002G037600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.005G048600 expressed protein -
6 Sobic.001G080800 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
7 Sobic.004G215200 expressed protein -
8 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
9 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
10 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
11 Sobic.005G185200 - -
12 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
13 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
14 Sobic.008G013200 expressed protein -
15 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
16 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
17 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
18 Sobic.003G044000 lipase class 3 family protein, putative, expressed -
19 Sobic.006G100266 - -
20 Sobic.010G009600 OsFBX182 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G203800 Sobic001G203800 Sobic003G270100 Sobic003G270100 Sobic001G203800--Sobic003G270100 Sobic004G328100 Sobic004G328100 Sobic001G203800--Sobic004G328100 Sobic006G208200 Sobic006G208200 Sobic001G203800--Sobic006G208200 Sobic002G037600 Sobic002G037600 Sobic001G203800--Sobic002G037600 Sobic005G048600 Sobic005G048600 Sobic001G203800--Sobic005G048600 Sobic001G080800 Sobic001G080800 Sobic001G203800--Sobic001G080800 Sobic004G215200 Sobic004G215200 Sobic001G203800--Sobic004G215200 Sobic003G308300 Sobic003G308300 Sobic001G203800--Sobic003G308300 Sobic001G073700 Sobic001G073700 Sobic001G203800--Sobic001G073700 Sobic003G270100--Sobic001G203800 Sobic003G270100--Sobic003G308300 Sobic003G255700 Sobic003G255700 Sobic003G270100--Sobic003G255700 Sobic001G050500 Sobic001G050500 Sobic003G270100--Sobic001G050500 Sobic004G186300 Sobic004G186300 Sobic003G270100--Sobic004G186300 Sobic006G100266 Sobic006G100266 Sobic003G270100--Sobic006G100266 Sobic003G270100--Sobic004G328100 Sobic001G305900 Sobic001G305900 Sobic003G270100--Sobic001G305900 Sobic003G270100--Sobic006G208200 Sobic002G304500 Sobic002G304500 Sobic004G328100--Sobic002G304500 Sobic002G382100 Sobic002G382100 Sobic004G328100--Sobic002G382100 Sobic008G007800 Sobic008G007800 Sobic004G328100--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic004G328100--Sobic002G361500 Sobic005G201200 Sobic005G201200 Sobic004G328100--Sobic005G201200 Sobic002G377900 Sobic002G377900 Sobic004G328100--Sobic002G377900 Sobic002G016000 Sobic002G016000 Sobic004G328100--Sobic002G016000 Sobic004G328100--Sobic001G080800 Sobic010G198400 Sobic010G198400 Sobic004G328100--Sobic010G198400 Sobic006G208200--Sobic004G215200 Sobic006G208200--Sobic001G203800 Sobic001G499500 Sobic001G499500 Sobic006G208200--Sobic001G499500 Sobic003G418400 Sobic003G418400 Sobic006G208200--Sobic003G418400 Sobic006G208200--Sobic003G270100 Sobic006G208200--Sobic002G037600 Sobic006G208200--Sobic004G328100 Sobic010G062900 Sobic010G062900 Sobic006G208200--Sobic010G062900 Sobic010G009600 Sobic010G009600 Sobic006G208200--Sobic010G009600 Sobic001G196800 Sobic001G196800 Sobic002G037600--Sobic001G196800 Sobic003G294900 Sobic003G294900 Sobic002G037600--Sobic003G294900 Sobic002G037600--Sobic001G203800 Sobic002G037600--Sobic006G208200 Sobic002G037600--Sobic004G328100 Sobic006G272300 Sobic006G272300 Sobic002G037600--Sobic006G272300 Sobic001G309200 Sobic001G309200 Sobic002G037600--Sobic001G309200 Sobic005G185200 Sobic005G185200 Sobic002G037600--Sobic005G185200 Sobic002G037600--Sobic003G270100 Sobic007G086600 Sobic007G086600 Sobic005G048600--Sobic007G086600 Sobic003G352900 Sobic003G352900 Sobic005G048600--Sobic003G352900 Sobic005G048600--Sobic001G073700 Sobic003G293400 Sobic003G293400 Sobic005G048600--Sobic003G293400 Sobic001G076600 Sobic001G076600 Sobic005G048600--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic005G048600--Sobic003G217800 Sobic007G144100 Sobic007G144100 Sobic005G048600--Sobic007G144100 Sobic005G060100 Sobic005G060100 Sobic005G048600--Sobic005G060100 Sobic005G045800 Sobic005G045800 Sobic005G048600--Sobic005G045800 Sobic001G485000 Sobic001G485000 Sobic001G080800--Sobic001G485000 Sobic001G080800--Sobic003G217800 Sobic009G017600 Sobic009G017600 Sobic001G080800--Sobic009G017600 Sobic001G080800--Sobic007G144100 Sobic001G080800--Sobic004G328100 Sobic001G080800--Sobic003G352900 Sobic001G080800--Sobic005G045800 Sobic003G349900 Sobic003G349900 Sobic001G080800--Sobic003G349900 Sobic002G414800 Sobic002G414800 Sobic001G080800--Sobic002G414800 Sobic001G053350 Sobic001G053350 Sobic004G215200--Sobic001G053350 Sobic004G215200--Sobic010G062900 Sobic004G215200--Sobic006G208200 Sobic001G485500 Sobic001G485500 Sobic004G215200--Sobic001G485500 Sobic004G215200--Sobic001G499500 Sobic009G163400 Sobic009G163400 Sobic004G215200--Sobic009G163400 Sobic002G309100 Sobic002G309100 Sobic004G215200--Sobic002G309100 Sobic004G215200--Sobic007G086600 Sobic010G252100 Sobic010G252100 Sobic004G215200--Sobic010G252100 Sobic003G308300--Sobic003G255700 Sobic008G013200 Sobic008G013200 Sobic003G308300--Sobic008G013200 Sobic009G186700 Sobic009G186700 Sobic003G308300--Sobic009G186700 Sobic007G148400 Sobic007G148400 Sobic003G308300--Sobic007G148400 Sobic007G218600 Sobic007G218600 Sobic003G308300--Sobic007G218600 Sobic003G308300--Sobic001G305900 Sobic003G308300--Sobic004G328100 Sobic003G308300--Sobic006G100266 Sobic003G308300--Sobic003G270100 Sobic009G201000 Sobic009G201000 Sobic001G073700--Sobic009G201000 Sobic002G362500 Sobic002G362500 Sobic001G073700--Sobic002G362500 Sobic006G156400 Sobic006G156400 Sobic001G073700--Sobic006G156400 Sobic001G322400 Sobic001G322400 Sobic001G073700--Sobic001G322400 Sobic006G050100 Sobic006G050100 Sobic001G073700--Sobic006G050100 Sobic001G073700--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic001G073700--Sobic008G166100 Sobic001G072000 Sobic001G072000 Sobic001G073700--Sobic001G072000 Sobic008G141100 Sobic008G141100 Sobic001G073700--Sobic008G141100
Octagon: transcription factors


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