Gene annotation
Transcriptome id Sobic.004G186300.1
Synonym Sb04g023510
Functional annotation protein phosphotase protein, putative, expressed
UniProt C5XVK8
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF350
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G47380 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os02g35910.1 : protein phosphotase protein, putative, expressed
MaizeGDB (Corn) Zm00025a020758 , Zm00025a031679
Brachypodium KQJ99978 , KQJ82879 , PNT68866
Barley HORVU6Hr1G048180.11 , HORVU6Hr1G048180.10 , HORVU6Hr1G048180.5 , HORVU6Hr1G048180.4 , HORVU6Hr1G048180.7 , HORVU6Hr1G048180.6 , HORVU6Hr1G048180.1 , HORVU6Hr1G048180.3 , HORVU6Hr1G048180.2 , HORVU6Hr1G048180.9 , HORVU6Hr1G048180.8
Wheat TraesCS6D02G184300 , TraesCS6A02G199000 , TraesCS6B02G220000 , TraesCS2B02G335200 , TraesCS2B02G335200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G222500 expressed protein -
2 Sobic.003G270100 dehydrin family protein, expressed -
3 Sobic.006G219900 csAtPR5, putative, expressed -
4 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
5 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
6 Sobic.010G253400 AIG2-like family domain containing protein, expressed -
7 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
8 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
9 Sobic.003G346500 similar to Nuclear transcription factor Y subunit B-3(PubMedID : 29862293)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08065: NFYB, nuclear transcription Y subunit beta
10 Sobic.003G404100 CBS domain-containing protein, putative, expressed -
11 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
12 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
13 Sobic.009G186700 TraB family protein, putative, expressed -
14 Sobic.001G305900 GTP binding protein, putative, expressed -
15 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
16 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
17 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
18 Sobic.001G490950 - -
19 Sobic.004G032600 - -
20 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46


Gene co-expression network
sample Sobic004G186300 Sobic004G186300 Sobic006G222500 Sobic006G222500 Sobic004G186300--Sobic006G222500 Sobic003G270100 Sobic003G270100 Sobic004G186300--Sobic003G270100 Sobic006G219900 Sobic006G219900 Sobic004G186300--Sobic006G219900 Sobic003G308300 Sobic003G308300 Sobic004G186300--Sobic003G308300 Sobic007G148400 Sobic007G148400 Sobic004G186300--Sobic007G148400 Sobic010G253400 Sobic010G253400 Sobic004G186300--Sobic010G253400 Sobic007G218600 Sobic007G218600 Sobic004G186300--Sobic007G218600 Sobic001G408400 Sobic001G408400 Sobic004G186300--Sobic001G408400 Sobic003G346500 Sobic003G346500 Sobic004G186300--Sobic003G346500 Sobic006G222500--Sobic007G148400 Sobic006G222500--Sobic004G186300 Sobic007G146600 Sobic007G146600 Sobic006G222500--Sobic007G146600 Sobic003G404100 Sobic003G404100 Sobic006G222500--Sobic003G404100 Sobic006G222500--Sobic003G270100 Sobic006G222500--Sobic007G218600 Sobic001G193100 Sobic001G193100 Sobic006G222500--Sobic001G193100 Sobic002G419000 Sobic002G419000 Sobic006G222500--Sobic002G419000 Sobic006G222500--Sobic003G308300 Sobic001G203800 Sobic001G203800 Sobic003G270100--Sobic001G203800 Sobic003G270100--Sobic003G308300 Sobic003G255700 Sobic003G255700 Sobic003G270100--Sobic003G255700 Sobic001G050500 Sobic001G050500 Sobic003G270100--Sobic001G050500 Sobic003G270100--Sobic004G186300 Sobic006G100266 Sobic006G100266 Sobic003G270100--Sobic006G100266 Sobic004G328100 Sobic004G328100 Sobic003G270100--Sobic004G328100 Sobic001G305900 Sobic001G305900 Sobic003G270100--Sobic001G305900 Sobic006G208200 Sobic006G208200 Sobic003G270100--Sobic006G208200 Sobic006G219900--Sobic004G186300 Sobic001G490950 Sobic001G490950 Sobic006G219900--Sobic001G490950 Sobic004G032600 Sobic004G032600 Sobic006G219900--Sobic004G032600 Sobic001G414100 Sobic001G414100 Sobic006G219900--Sobic001G414100 Sobic002G160100 Sobic002G160100 Sobic006G219900--Sobic002G160100 Sobic003G117800 Sobic003G117800 Sobic006G219900--Sobic003G117800 Sobic003G392275 Sobic003G392275 Sobic006G219900--Sobic003G392275 Sobic004G098800 Sobic004G098800 Sobic006G219900--Sobic004G098800 Sobic002G102300 Sobic002G102300 Sobic006G219900--Sobic002G102300 Sobic003G308300--Sobic003G255700 Sobic008G013200 Sobic008G013200 Sobic003G308300--Sobic008G013200 Sobic009G186700 Sobic009G186700 Sobic003G308300--Sobic009G186700 Sobic003G308300--Sobic007G148400 Sobic003G308300--Sobic007G218600 Sobic003G308300--Sobic001G305900 Sobic003G308300--Sobic004G328100 Sobic003G308300--Sobic006G100266 Sobic003G308300--Sobic003G270100 Sobic007G148400--Sobic007G218600 Sobic007G148400--Sobic003G308300 Sobic007G148400--Sobic006G222500 Sobic007G148400--Sobic009G186700 Sobic007G148400--Sobic001G050500 Sobic007G148400--Sobic007G146600 Sobic007G148400--Sobic003G255700 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic008G141600 Sobic008G141600 Sobic010G253400--Sobic008G141600 Sobic010G253400--Sobic001G408400 Sobic004G074900 Sobic004G074900 Sobic010G253400--Sobic004G074900 Sobic002G368100 Sobic002G368100 Sobic010G253400--Sobic002G368100 Sobic003G372200 Sobic003G372200 Sobic010G253400--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic010G253400--Sobic002G420600 Sobic003G040700 Sobic003G040700 Sobic010G253400--Sobic003G040700 Sobic005G145201 Sobic005G145201 Sobic010G253400--Sobic005G145201 Sobic010G253400--Sobic001G490950 Sobic007G218600--Sobic009G186700 Sobic007G218600--Sobic001G305900 Sobic007G218600--Sobic007G148400 Sobic007G218600--Sobic003G255700 Sobic001G280500 Sobic001G280500 Sobic007G218600--Sobic001G280500 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic006G120900 Sobic006G120900 Sobic001G408400--Sobic006G120900 Sobic001G408400--Sobic002G420600 Sobic003G380300 Sobic003G380300 Sobic001G408400--Sobic003G380300 Sobic001G408400--Sobic010G253400 Sobic003G137600 Sobic003G137600 Sobic001G408400--Sobic003G137600 Sobic001G408400--Sobic008G141600 Sobic003G234500 Sobic003G234500 Sobic001G408400--Sobic003G234500 Sobic001G408400--Sobic005G145201 Sobic004G173700 Sobic004G173700 Sobic001G408400--Sobic004G173700 Sobic004G101500 Sobic004G101500 Sobic003G346500--Sobic004G101500 Sobic003G346500--Sobic004G186300 Sobic003G346500--Sobic010G253400 Sobic003G346500--Sobic006G222500 Sobic008G140400 Sobic008G140400 Sobic003G346500--Sobic008G140400 Sobic003G346500--Sobic007G148400 Sobic003G346500--Sobic003G270100 Sobic007G140600 Sobic007G140600 Sobic003G346500--Sobic007G140600 Sobic003G346500--Sobic001G408400
Octagon: transcription factors


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