Gene annotation
Transcriptome id Sobic.003G346500.1
Synonym NF-YB10, Sb03g039000,Nuclear Factor Y, SbNF-YB5
Functional annotation similar to Nuclear transcription factor Y subunit B-3 (PubMedID : 29862293)
tentative name (PubMedID : 31536532)
histone-like transcription factor and archaeal histone, putative, expressed
UniProt A0A1W0W093
Pfam PF00808
Panther DB PTHR11064 PTHR11064:SF27
NCBI CDD KOG0869; CCAAT-binding factor, subunit A (HAP3)
KEGG Orthology K08065; NFYB, nuclear transcription Y subunit beta
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37060 : nuclear factor Y, subunit B8
RAP-DB (Rice) LOC_Os01g61810.1 : histone-like transcription factor and archaeal histone, putative, expressed
MaizeGDB (Corn) Zm00025a026972 , Zm00025a039711 , Zm00025a002857
Brachypodium KQK10455 , PNT71091 , KQK05856 , KQK10456
Barley HORVU1Hr1G071620.7 , HORVU1Hr1G071620.6 , HORVU1Hr1G071620.5 , HORVU1Hr1G071620.4 , HORVU1Hr1G071620.3 , HORVU1Hr1G071620.2 , HORVU1Hr1G071620.1 , HORVU1Hr1G071620.8 , HORVU1Hr1G071620.22 , HORVU1Hr1G071620.23 , HORVU1Hr1G071620.20 , HORVU1Hr1G071620.21 , HORVU1Hr1G071620.9 , HORVU1Hr1G071620.19 , HORVU1Hr1G071620.18 , HORVU1Hr1G071620.16 , HORVU1Hr1G071620.14 , HORVU1Hr1G071620.13 , HORVU1Hr1G071620.12 , HORVU1Hr1G071620.11
Wheat TraesCS1A02G288500 , TraesCS1A02G288500 , TraesCS1A02G288500 , TraesCS1A02G288500 , TraesCS1D02G287500 , TraesCS1D02G287500 , TraesCS1B02G297900 , TraesCS1B02G297900 , TraesCS1B02G297900 , TraesCS3B02G385600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G101500 DNA binding protein, putative, expressed K10639: CCNB1IP1, E3 ubiquitin-protein ligase CCNP1IP1
2 Sobic.004G186300 protein phosphotase protein, putative, expressed -
3 Sobic.010G253400 AIG2-like family domain containing protein, expressed -
4 Sobic.006G222500 expressed protein -
5 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
6 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
7 Sobic.003G270100 dehydrin family protein, expressed -
8 Sobic.007G140600 stromal cell-derived factor 2-like protein precursor, putative, expressed -
9 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
10 Sobic.003G199500 integral membrane protein, putative, expressed -
11 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
12 Sobic.001G511300 expressed protein -
13 Sobic.009G050500 nifU, putative, expressed -
14 Sobic.003G404100 CBS domain-containing protein, putative, expressed -
15 Sobic.003G302200 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
16 Sobic.002G139600 2-phosphoglycerate kinase-related, putative, expressed -
17 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
18 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
19 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
20 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3


Gene co-expression network
sample Sobic003G346500 Sobic003G346500 Sobic004G101500 Sobic004G101500 Sobic003G346500--Sobic004G101500 Sobic004G186300 Sobic004G186300 Sobic003G346500--Sobic004G186300 Sobic010G253400 Sobic010G253400 Sobic003G346500--Sobic010G253400 Sobic006G222500 Sobic006G222500 Sobic003G346500--Sobic006G222500 Sobic008G140400 Sobic008G140400 Sobic003G346500--Sobic008G140400 Sobic007G148400 Sobic007G148400 Sobic003G346500--Sobic007G148400 Sobic003G270100 Sobic003G270100 Sobic003G346500--Sobic003G270100 Sobic007G140600 Sobic007G140600 Sobic003G346500--Sobic007G140600 Sobic001G408400 Sobic001G408400 Sobic003G346500--Sobic001G408400 Sobic004G101500--Sobic003G346500 Sobic004G101500--Sobic003G270100 Sobic004G101500--Sobic006G222500 Sobic008G013200 Sobic008G013200 Sobic004G101500--Sobic008G013200 Sobic003G033000 Sobic003G033000 Sobic004G101500--Sobic003G033000 Sobic004G101500--Sobic007G148400 Sobic003G255700 Sobic003G255700 Sobic004G101500--Sobic003G255700 Sobic008G010900 Sobic008G010900 Sobic004G101500--Sobic008G010900 Sobic003G308300 Sobic003G308300 Sobic004G101500--Sobic003G308300 Sobic004G186300--Sobic006G222500 Sobic004G186300--Sobic003G270100 Sobic006G219900 Sobic006G219900 Sobic004G186300--Sobic006G219900 Sobic004G186300--Sobic003G308300 Sobic004G186300--Sobic007G148400 Sobic004G186300--Sobic010G253400 Sobic007G218600 Sobic007G218600 Sobic004G186300--Sobic007G218600 Sobic004G186300--Sobic001G408400 Sobic004G186300--Sobic003G346500 Sobic008G141600 Sobic008G141600 Sobic010G253400--Sobic008G141600 Sobic010G253400--Sobic001G408400 Sobic004G074900 Sobic004G074900 Sobic010G253400--Sobic004G074900 Sobic002G368100 Sobic002G368100 Sobic010G253400--Sobic002G368100 Sobic003G372200 Sobic003G372200 Sobic010G253400--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic010G253400--Sobic002G420600 Sobic003G040700 Sobic003G040700 Sobic010G253400--Sobic003G040700 Sobic005G145201 Sobic005G145201 Sobic010G253400--Sobic005G145201 Sobic001G490950 Sobic001G490950 Sobic010G253400--Sobic001G490950 Sobic006G222500--Sobic007G148400 Sobic006G222500--Sobic004G186300 Sobic007G146600 Sobic007G146600 Sobic006G222500--Sobic007G146600 Sobic003G404100 Sobic003G404100 Sobic006G222500--Sobic003G404100 Sobic006G222500--Sobic003G270100 Sobic006G222500--Sobic007G218600 Sobic001G193100 Sobic001G193100 Sobic006G222500--Sobic001G193100 Sobic002G419000 Sobic002G419000 Sobic006G222500--Sobic002G419000 Sobic006G222500--Sobic003G308300 Sobic001G005600 Sobic001G005600 Sobic008G140400--Sobic001G005600 Sobic007G173700 Sobic007G173700 Sobic008G140400--Sobic007G173700 Sobic008G140400--Sobic006G222500 Sobic001G122000 Sobic001G122000 Sobic008G140400--Sobic001G122000 Sobic001G023100 Sobic001G023100 Sobic008G140400--Sobic001G023100 Sobic008G140400--Sobic002G419000 Sobic002G357900 Sobic002G357900 Sobic008G140400--Sobic002G357900 Sobic008G140400--Sobic001G193100 Sobic003G199500 Sobic003G199500 Sobic008G140400--Sobic003G199500 Sobic007G148400--Sobic007G218600 Sobic007G148400--Sobic003G308300 Sobic007G148400--Sobic006G222500 Sobic009G186700 Sobic009G186700 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G148400--Sobic007G146600 Sobic007G148400--Sobic003G255700 Sobic001G305900 Sobic001G305900 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic001G203800 Sobic001G203800 Sobic003G270100--Sobic001G203800 Sobic003G270100--Sobic003G308300 Sobic003G270100--Sobic003G255700 Sobic003G270100--Sobic001G050500 Sobic003G270100--Sobic004G186300 Sobic006G100266 Sobic006G100266 Sobic003G270100--Sobic006G100266 Sobic004G328100 Sobic004G328100 Sobic003G270100--Sobic004G328100 Sobic003G270100--Sobic001G305900 Sobic006G208200 Sobic006G208200 Sobic003G270100--Sobic006G208200 Sobic008G050700 Sobic008G050700 Sobic007G140600--Sobic008G050700 Sobic007G140600--Sobic003G308300 Sobic001G347700 Sobic001G347700 Sobic007G140600--Sobic001G347700 Sobic001G457000 Sobic001G457000 Sobic007G140600--Sobic001G457000 Sobic007G140600--Sobic003G346500 Sobic010G028400 Sobic010G028400 Sobic007G140600--Sobic010G028400 Sobic001G485300 Sobic001G485300 Sobic007G140600--Sobic001G485300 Sobic010G069500 Sobic010G069500 Sobic007G140600--Sobic010G069500 Sobic004G011700 Sobic004G011700 Sobic007G140600--Sobic004G011700 Sobic006G120900 Sobic006G120900 Sobic001G408400--Sobic006G120900 Sobic001G408400--Sobic002G420600 Sobic003G380300 Sobic003G380300 Sobic001G408400--Sobic003G380300 Sobic001G408400--Sobic010G253400 Sobic003G137600 Sobic003G137600 Sobic001G408400--Sobic003G137600 Sobic001G408400--Sobic008G141600 Sobic003G234500 Sobic003G234500 Sobic001G408400--Sobic003G234500 Sobic001G408400--Sobic005G145201 Sobic004G173700 Sobic004G173700 Sobic001G408400--Sobic004G173700
Octagon: transcription factors


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