Gene annotation
Transcriptome id Sobic.001G408400.1,Sobic.001G408400.2
Synonym Sb01g038580
Functional annotation phosphatase, putative, expressed
UniProt A0A1Z5SAD5 , A0A1Z5SAJ7
Pfam PF01569
Panther DB PTHR11247
NCBI CDD KOG3146; Dolichyl pyrophosphate phosphatase and related acid phosphatases
KEGG Orthology K07252; dolichyldiphosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03080 : Phosphatidic acid phosphatase (PAP2) family protein
RAP-DB (Rice) LOC_Os03g17940.1 : phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a001956
Brachypodium KQK22180
Barley HORVU4Hr1G056660.1 , HORVU4Hr1G056660.3 , HORVU4Hr1G056660.2
Wheat TraesCS2A02G403000 , TraesCS4A02G108400 , TraesCS4B02G196200 , TraesCS4D02G196500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
2 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
3 Sobic.003G380300 cytochrome c, putative, expressed K08738: cytochrome c
4 Sobic.010G253400 AIG2-like family domain containing protein, expressed -
5 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
6 Sobic.008G141600 expressed protein -
7 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
8 Sobic.005G145201 - K06630: 14-3-3 protein epsilon
9 Sobic.004G173700 SLL1 protein, putative, expressed -
10 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
11 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
12 Sobic.001G536100 lysM domain containing protein, putative, expressed -
13 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
14 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
15 Sobic.002G259700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
16 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
18 Sobic.007G138100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
19 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
20 Sobic.001G387200 expressed protein -


Gene co-expression network
sample Sobic001G408400 Sobic001G408400 Sobic006G120900 Sobic006G120900 Sobic001G408400--Sobic006G120900 Sobic002G420600 Sobic002G420600 Sobic001G408400--Sobic002G420600 Sobic003G380300 Sobic003G380300 Sobic001G408400--Sobic003G380300 Sobic010G253400 Sobic010G253400 Sobic001G408400--Sobic010G253400 Sobic003G137600 Sobic003G137600 Sobic001G408400--Sobic003G137600 Sobic008G141600 Sobic008G141600 Sobic001G408400--Sobic008G141600 Sobic003G234500 Sobic003G234500 Sobic001G408400--Sobic003G234500 Sobic005G145201 Sobic005G145201 Sobic001G408400--Sobic005G145201 Sobic004G173700 Sobic004G173700 Sobic001G408400--Sobic004G173700 Sobic006G120900--Sobic004G173700 Sobic006G120900--Sobic003G234500 Sobic003G089100 Sobic003G089100 Sobic006G120900--Sobic003G089100 Sobic003G129900 Sobic003G129900 Sobic006G120900--Sobic003G129900 Sobic006G120900--Sobic003G380300 Sobic003G212000 Sobic003G212000 Sobic006G120900--Sobic003G212000 Sobic001G387200 Sobic001G387200 Sobic006G120900--Sobic001G387200 Sobic006G120900--Sobic002G420600 Sobic006G120900--Sobic003G137600 Sobic002G420600--Sobic003G089100 Sobic002G420600--Sobic004G173700 Sobic002G420600--Sobic006G120900 Sobic003G201500 Sobic003G201500 Sobic002G420600--Sobic003G201500 Sobic002G352200 Sobic002G352200 Sobic002G420600--Sobic002G352200 Sobic002G255400 Sobic002G255400 Sobic002G420600--Sobic002G255400 Sobic001G303900 Sobic001G303900 Sobic002G420600--Sobic001G303900 Sobic003G260600 Sobic003G260600 Sobic002G420600--Sobic003G260600 Sobic003G372200 Sobic003G372200 Sobic002G420600--Sobic003G372200 Sobic003G380300--Sobic006G120900 Sobic003G380300--Sobic001G408400 Sobic003G380300--Sobic001G387200 Sobic010G105000 Sobic010G105000 Sobic003G380300--Sobic010G105000 Sobic003G380300--Sobic004G173700 Sobic003G380300--Sobic003G234500 Sobic003G380300--Sobic003G137600 Sobic003G380300--Sobic003G129900 Sobic002G259700 Sobic002G259700 Sobic003G380300--Sobic002G259700 Sobic010G253400--Sobic008G141600 Sobic010G253400--Sobic001G408400 Sobic004G074900 Sobic004G074900 Sobic010G253400--Sobic004G074900 Sobic002G368100 Sobic002G368100 Sobic010G253400--Sobic002G368100 Sobic010G253400--Sobic003G372200 Sobic010G253400--Sobic002G420600 Sobic003G040700 Sobic003G040700 Sobic010G253400--Sobic003G040700 Sobic010G253400--Sobic005G145201 Sobic001G490950 Sobic001G490950 Sobic010G253400--Sobic001G490950 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G137600--Sobic003G234500 Sobic003G137600--Sobic006G120900 Sobic002G113200 Sobic002G113200 Sobic003G137600--Sobic002G113200 Sobic001G365700 Sobic001G365700 Sobic003G137600--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic003G137600--Sobic007G212100 Sobic003G284100 Sobic003G284100 Sobic003G137600--Sobic003G284100 Sobic009G189700 Sobic009G189700 Sobic003G137600--Sobic009G189700 Sobic008G141600--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic008G141600--Sobic003G238250 Sobic008G141600--Sobic002G368100 Sobic007G101600 Sobic007G101600 Sobic008G141600--Sobic007G101600 Sobic010G006800 Sobic010G006800 Sobic008G141600--Sobic010G006800 Sobic008G141600--Sobic001G490950 Sobic002G102300 Sobic002G102300 Sobic008G141600--Sobic002G102300 Sobic006G267100 Sobic006G267100 Sobic008G141600--Sobic006G267100 Sobic007G138000 Sobic007G138000 Sobic008G141600--Sobic007G138000 Sobic003G234500--Sobic003G212000 Sobic008G071300 Sobic008G071300 Sobic003G234500--Sobic008G071300 Sobic003G234500--Sobic006G267100 Sobic005G144000 Sobic005G144000 Sobic003G234500--Sobic005G144000 Sobic002G170100 Sobic002G170100 Sobic003G234500--Sobic002G170100 Sobic003G234500--Sobic009G189700 Sobic004G180100 Sobic004G180100 Sobic003G234500--Sobic004G180100 Sobic008G122800 Sobic008G122800 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic005G145201--Sobic003G040700 Sobic004G107100 Sobic004G107100 Sobic005G145201--Sobic004G107100 Sobic005G145201--Sobic003G089100 Sobic005G145201--Sobic006G120900 Sobic005G145201--Sobic003G234500 Sobic003G235100 Sobic003G235100 Sobic005G145201--Sobic003G235100 Sobic005G145201--Sobic010G105000 Sobic005G145201--Sobic001G408400 Sobic010G173300 Sobic010G173300 Sobic005G145201--Sobic010G173300 Sobic004G173700--Sobic003G137600 Sobic004G173700--Sobic006G120900 Sobic004G173700--Sobic002G420600 Sobic004G173700--Sobic001G387200 Sobic004G173700--Sobic001G365700 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300
Octagon: transcription factors


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