Gene annotation
Transcriptome id Sobic.005G145201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIM0
Pfam PF00244
Panther DB PTHR18860 PTHR18860:SF34
NCBI CDD KOG0841; Multifunctional chaperone (14-3-3 family)
KEGG Orthology K06630; 14-3-3 protein epsilon
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78300 : general regulatory factor 2
RAP-DB (Rice) LOC_Os11g34450.1 : 14-3-3 protein, putative, expressed
MaizeGDB (Corn) Zm00025a033709 , Zm00025a015727 , Zm00025a011106 , Zm00025a045692 , Zm00025a010318 , Zm00025a056225 , Zm00025a034072
Brachypodium KQJ98723 , PNT61235 , KQJ98364 , KQJ98365 , KQJ82997 , KQJ88264
Barley HORVU4Hr1G043300.1 , HORVU4Hr1G043300.3 , HORVU4Hr1G043300.4 , HORVU4Hr1G031770.1 , HORVU4Hr1G007370.1 , HORVU4Hr1G007370.3 , HORVU4Hr1G007370.2 , HORVU4Hr1G007370.5 , HORVU4Hr1G007370.4
Wheat TraesCS7A02G295500 , TraesCS4D02G155900 , TraesCS4D02G155900 , TraesCS4D02G046400 , TraesCS4B02G159900 , TraesCS4B02G159900 , TraesCS4B02G159900 , TraesCS7B02G183800 , TraesCS3A02G055600 , TraesCS7D02G292400 , TraesCS4B02G045500 , TraesCS4A02G268700 , TraesCS4A02G268700 , TraesCS4A02G151000 , TraesCS4A02G151000 , TraesCS4A02G151000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
2 Sobic.004G107100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CID11, putative, expressed -
3 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
5 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
6 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
7 Sobic.010G105000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
8 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
9 Sobic.010G173300 - -
10 Sobic.007G004300 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed -
11 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.004G176200 SacI homology domain containing protein, expressed -
13 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
14 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
15 Sobic.001G387300 exostosin family domain containing protein, expressed -
16 Sobic.002G259700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
17 Sobic.003G380300 cytochrome c, putative, expressed K08738: cytochrome c
18 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
19 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
20 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma


Gene co-expression network
sample Sobic005G145201 Sobic005G145201 Sobic003G040700 Sobic003G040700 Sobic005G145201--Sobic003G040700 Sobic004G107100 Sobic004G107100 Sobic005G145201--Sobic004G107100 Sobic003G089100 Sobic003G089100 Sobic005G145201--Sobic003G089100 Sobic006G120900 Sobic006G120900 Sobic005G145201--Sobic006G120900 Sobic003G234500 Sobic003G234500 Sobic005G145201--Sobic003G234500 Sobic003G235100 Sobic003G235100 Sobic005G145201--Sobic003G235100 Sobic010G105000 Sobic010G105000 Sobic005G145201--Sobic010G105000 Sobic001G408400 Sobic001G408400 Sobic005G145201--Sobic001G408400 Sobic010G173300 Sobic010G173300 Sobic005G145201--Sobic010G173300 Sobic002G362500 Sobic002G362500 Sobic003G040700--Sobic002G362500 Sobic004G074900 Sobic004G074900 Sobic003G040700--Sobic004G074900 Sobic007G138000 Sobic007G138000 Sobic003G040700--Sobic007G138000 Sobic007G101600 Sobic007G101600 Sobic003G040700--Sobic007G101600 Sobic004G062200 Sobic004G062200 Sobic003G040700--Sobic004G062200 Sobic007G039200 Sobic007G039200 Sobic003G040700--Sobic007G039200 Sobic006G267100 Sobic006G267100 Sobic003G040700--Sobic006G267100 Sobic001G073700 Sobic001G073700 Sobic003G040700--Sobic001G073700 Sobic002G389600 Sobic002G389600 Sobic003G040700--Sobic002G389600 Sobic004G107100--Sobic010G173300 Sobic004G113600 Sobic004G113600 Sobic004G107100--Sobic004G113600 Sobic003G244400 Sobic003G244400 Sobic004G107100--Sobic003G244400 Sobic001G384200 Sobic001G384200 Sobic004G107100--Sobic001G384200 Sobic004G107100--Sobic006G267100 Sobic001G414650 Sobic001G414650 Sobic004G107100--Sobic001G414650 Sobic001G400000 Sobic001G400000 Sobic004G107100--Sobic001G400000 Sobic001G112600 Sobic001G112600 Sobic004G107100--Sobic001G112600 Sobic001G387300 Sobic001G387300 Sobic004G107100--Sobic001G387300 Sobic003G201500 Sobic003G201500 Sobic003G089100--Sobic003G201500 Sobic003G013700 Sobic003G013700 Sobic003G089100--Sobic003G013700 Sobic003G260600 Sobic003G260600 Sobic003G089100--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic003G089100--Sobic002G255400 Sobic003G089100--Sobic004G113600 Sobic003G089100--Sobic001G400000 Sobic002G420600 Sobic002G420600 Sobic003G089100--Sobic002G420600 Sobic005G050400 Sobic005G050400 Sobic003G089100--Sobic005G050400 Sobic001G356200 Sobic001G356200 Sobic003G089100--Sobic001G356200 Sobic004G173700 Sobic004G173700 Sobic006G120900--Sobic004G173700 Sobic006G120900--Sobic003G234500 Sobic006G120900--Sobic003G089100 Sobic003G129900 Sobic003G129900 Sobic006G120900--Sobic003G129900 Sobic003G380300 Sobic003G380300 Sobic006G120900--Sobic003G380300 Sobic003G212000 Sobic003G212000 Sobic006G120900--Sobic003G212000 Sobic001G387200 Sobic001G387200 Sobic006G120900--Sobic001G387200 Sobic006G120900--Sobic002G420600 Sobic003G137600 Sobic003G137600 Sobic006G120900--Sobic003G137600 Sobic003G234500--Sobic003G212000 Sobic008G071300 Sobic008G071300 Sobic003G234500--Sobic008G071300 Sobic003G234500--Sobic006G267100 Sobic005G144000 Sobic005G144000 Sobic003G234500--Sobic005G144000 Sobic002G170100 Sobic002G170100 Sobic003G234500--Sobic002G170100 Sobic009G189700 Sobic009G189700 Sobic003G234500--Sobic009G189700 Sobic004G180100 Sobic004G180100 Sobic003G234500--Sobic004G180100 Sobic008G122800 Sobic008G122800 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic009G046900 Sobic009G046900 Sobic003G235100--Sobic009G046900 Sobic007G004300 Sobic007G004300 Sobic003G235100--Sobic007G004300 Sobic009G116900 Sobic009G116900 Sobic003G235100--Sobic009G116900 Sobic002G084800 Sobic002G084800 Sobic003G235100--Sobic002G084800 Sobic003G235100--Sobic005G145201 Sobic008G152700 Sobic008G152700 Sobic003G235100--Sobic008G152700 Sobic003G402800 Sobic003G402800 Sobic003G235100--Sobic003G402800 Sobic004G350700 Sobic004G350700 Sobic003G235100--Sobic004G350700 Sobic003G235100--Sobic004G107100 Sobic010G105000--Sobic003G234500 Sobic007G086900 Sobic007G086900 Sobic010G105000--Sobic007G086900 Sobic010G105000--Sobic003G212000 Sobic003G024400 Sobic003G024400 Sobic010G105000--Sobic003G024400 Sobic010G105000--Sobic005G145201 Sobic010G105000--Sobic003G380300 Sobic006G270000 Sobic006G270000 Sobic010G105000--Sobic006G270000 Sobic002G103800 Sobic002G103800 Sobic010G105000--Sobic002G103800 Sobic010G105000--Sobic008G071300 Sobic001G408400--Sobic006G120900 Sobic001G408400--Sobic002G420600 Sobic001G408400--Sobic003G380300 Sobic010G253400 Sobic010G253400 Sobic001G408400--Sobic010G253400 Sobic001G408400--Sobic003G137600 Sobic008G141600 Sobic008G141600 Sobic001G408400--Sobic008G141600 Sobic001G408400--Sobic003G234500 Sobic001G408400--Sobic005G145201 Sobic001G408400--Sobic004G173700 Sobic010G173300--Sobic004G107100 Sobic006G150300 Sobic006G150300 Sobic010G173300--Sobic006G150300 Sobic010G173300--Sobic006G267100 Sobic010G173300--Sobic003G244400 Sobic010G173300--Sobic007G039200 Sobic009G202000 Sobic009G202000 Sobic010G173300--Sobic009G202000 Sobic010G173300--Sobic004G113600 Sobic010G173300--Sobic004G180100 Sobic010G173300--Sobic002G170100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.