Gene annotation
Transcriptome id Sobic.010G173300.3
Synonym
Functional annotation -
UniProt A0A194YJS3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G107100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CID11, putative, expressed -
2 Sobic.006G150300 expressed protein -
3 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.007G039200 MYB family transcription factor, putative, expressed -
6 Sobic.009G202000 GATA zinc finger domain containing protein, expressed -
7 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
8 Sobic.004G180100 - -
9 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
10 Sobic.002G088600 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
11 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
12 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
13 Sobic.003G093100 cyclin-related protein, putative, expressed -
14 Sobic.002G257001 - K13947: auxin efflux carrier family protein
15 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
16 Sobic.007G048101 - -
17 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
18 Sobic.004G303000 DTA2, putative, expressed -
19 Sobic.006G193400 regulatory protein, putative, expressed -
20 Sobic.001G241401 - -


Gene co-expression network
sample Sobic010G173300 Sobic010G173300 Sobic004G107100 Sobic004G107100 Sobic010G173300--Sobic004G107100 Sobic006G150300 Sobic006G150300 Sobic010G173300--Sobic006G150300 Sobic006G267100 Sobic006G267100 Sobic010G173300--Sobic006G267100 Sobic003G244400 Sobic003G244400 Sobic010G173300--Sobic003G244400 Sobic007G039200 Sobic007G039200 Sobic010G173300--Sobic007G039200 Sobic009G202000 Sobic009G202000 Sobic010G173300--Sobic009G202000 Sobic004G113600 Sobic004G113600 Sobic010G173300--Sobic004G113600 Sobic004G180100 Sobic004G180100 Sobic010G173300--Sobic004G180100 Sobic002G170100 Sobic002G170100 Sobic010G173300--Sobic002G170100 Sobic004G107100--Sobic010G173300 Sobic004G107100--Sobic004G113600 Sobic004G107100--Sobic003G244400 Sobic001G384200 Sobic001G384200 Sobic004G107100--Sobic001G384200 Sobic004G107100--Sobic006G267100 Sobic001G414650 Sobic001G414650 Sobic004G107100--Sobic001G414650 Sobic001G400000 Sobic001G400000 Sobic004G107100--Sobic001G400000 Sobic001G112600 Sobic001G112600 Sobic004G107100--Sobic001G112600 Sobic001G387300 Sobic001G387300 Sobic004G107100--Sobic001G387300 Sobic003G333100 Sobic003G333100 Sobic006G150300--Sobic003G333100 Sobic001G333700 Sobic001G333700 Sobic006G150300--Sobic001G333700 Sobic002G106600 Sobic002G106600 Sobic006G150300--Sobic002G106600 Sobic004G290600 Sobic004G290600 Sobic006G150300--Sobic004G290600 Sobic007G176900 Sobic007G176900 Sobic006G150300--Sobic007G176900 Sobic001G241401 Sobic001G241401 Sobic006G150300--Sobic001G241401 Sobic006G205400 Sobic006G205400 Sobic006G150300--Sobic006G205400 Sobic008G176500 Sobic008G176500 Sobic006G150300--Sobic008G176500 Sobic005G114201 Sobic005G114201 Sobic006G150300--Sobic005G114201 Sobic008G071300 Sobic008G071300 Sobic006G267100--Sobic008G071300 Sobic006G267100--Sobic001G414650 Sobic002G340600 Sobic002G340600 Sobic006G267100--Sobic002G340600 Sobic003G114600 Sobic003G114600 Sobic006G267100--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic006G267100--Sobic002G283200 Sobic006G105100 Sobic006G105100 Sobic006G267100--Sobic006G105100 Sobic004G042501 Sobic004G042501 Sobic006G267100--Sobic004G042501 Sobic002G380300 Sobic002G380300 Sobic006G267100--Sobic002G380300 Sobic003G290500 Sobic003G290500 Sobic006G267100--Sobic003G290500 Sobic001G370400 Sobic001G370400 Sobic003G244400--Sobic001G370400 Sobic001G103100 Sobic001G103100 Sobic003G244400--Sobic001G103100 Sobic008G055200 Sobic008G055200 Sobic003G244400--Sobic008G055200 Sobic001G432200 Sobic001G432200 Sobic003G244400--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic003G244400--Sobic006G204500 Sobic001G340800 Sobic001G340800 Sobic003G244400--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G244400--Sobic010G003200 Sobic007G039200--Sobic001G340800 Sobic002G389600 Sobic002G389600 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic007G039200--Sobic004G290600 Sobic008G166100 Sobic008G166100 Sobic007G039200--Sobic008G166100 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic009G202000--Sobic001G432200 Sobic009G202000--Sobic004G290600 Sobic010G142650 Sobic010G142650 Sobic009G202000--Sobic010G142650 Sobic002G088600 Sobic002G088600 Sobic009G202000--Sobic002G088600 Sobic003G093100 Sobic003G093100 Sobic009G202000--Sobic003G093100 Sobic009G202000--Sobic010G003200 Sobic009G202000--Sobic001G370400 Sobic006G171600 Sobic006G171600 Sobic009G202000--Sobic006G171600 Sobic004G177900 Sobic004G177900 Sobic009G202000--Sobic004G177900 Sobic004G113600--Sobic001G112600 Sobic004G113600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic004G113600--Sobic004G358000 Sobic009G242200 Sobic009G242200 Sobic004G113600--Sobic009G242200 Sobic004G113600--Sobic002G170100 Sobic005G050400 Sobic005G050400 Sobic004G113600--Sobic005G050400 Sobic004G113600--Sobic001G384200 Sobic004G113600--Sobic001G400000 Sobic005G054150 Sobic005G054150 Sobic004G113600--Sobic005G054150 Sobic001G234500 Sobic001G234500 Sobic004G180100--Sobic001G234500 Sobic009G086600 Sobic009G086600 Sobic004G180100--Sobic009G086600 Sobic004G180100--Sobic004G042501 Sobic010G145000 Sobic010G145000 Sobic004G180100--Sobic010G145000 Sobic005G170400 Sobic005G170400 Sobic004G180100--Sobic005G170400 Sobic001G183633 Sobic001G183633 Sobic004G180100--Sobic001G183633 Sobic008G122800 Sobic008G122800 Sobic004G180100--Sobic008G122800 Sobic004G180100--Sobic008G176500 Sobic010G034400 Sobic010G034400 Sobic004G180100--Sobic010G034400 Sobic002G170100--Sobic009G242200 Sobic002G170100--Sobic002G380300 Sobic002G170100--Sobic005G170400 Sobic002G170100--Sobic004G358000 Sobic003G218100 Sobic003G218100 Sobic002G170100--Sobic003G218100 Sobic002G170100--Sobic003G290500 Sobic003G304600 Sobic003G304600 Sobic002G170100--Sobic003G304600 Sobic005G144000 Sobic005G144000 Sobic002G170100--Sobic005G144000 Sobic002G170100--Sobic002G283200
Octagon: transcription factors


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