Gene annotation
Transcriptome id Sobic.010G105000.1
Synonym Sb10g009170
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
caleosin related protein, putative, expressed
UniProt C5Z7Z7
Pfam PF05042
Panther DB PTHR31495 PTHR31495:SF1
NCBI CDD -
KEGG Orthology K17991; peroxygenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70670 : Caleosin-related family protein
RAP-DB (Rice) LOC_Os06g14370.2 : caleosin related protein, putative, expressed
MaizeGDB (Corn) Zm00025a049379 , Zm00025a042719
Brachypodium -
Barley HORVU7Hr1G041470.2 , HORVU7Hr1G041470.1 , HORVU7Hr1G041470.4
Wheat TraesCS7D02G206200 , TraesCS7D02G206200 , TraesCS7A02G203000 , TraesCS7B02G110100 , TraesCS7A02G202900 , TraesCS7A02G202900 , TraesCS7B02G110300 , TraesCS7D02G206300
Populus -


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cDNA sequences
Sobic.010G105000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
2 Sobic.007G086900 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
4 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
5 Sobic.005G145201 - K06630: 14-3-3 protein epsilon
6 Sobic.003G380300 cytochrome c, putative, expressed K08738: cytochrome c
7 Sobic.006G270000 expressed protein -
8 Sobic.002G103800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
9 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
10 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
11 Sobic.001G241401 - -
12 Sobic.006G193400 regulatory protein, putative, expressed -
13 Sobic.002G192800 - -
14 Sobic.004G144800 - -
15 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G150300 expressed protein -
17 Sobic.003G110932 - -
18 Sobic.001G261476 - -
19 Sobic.001G156800 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
20 Sobic.004G107100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CID11, putative, expressed -


Gene co-expression network
sample Sobic010G105000 Sobic010G105000 Sobic003G234500 Sobic003G234500 Sobic010G105000--Sobic003G234500 Sobic007G086900 Sobic007G086900 Sobic010G105000--Sobic007G086900 Sobic003G212000 Sobic003G212000 Sobic010G105000--Sobic003G212000 Sobic003G024400 Sobic003G024400 Sobic010G105000--Sobic003G024400 Sobic005G145201 Sobic005G145201 Sobic010G105000--Sobic005G145201 Sobic003G380300 Sobic003G380300 Sobic010G105000--Sobic003G380300 Sobic006G270000 Sobic006G270000 Sobic010G105000--Sobic006G270000 Sobic002G103800 Sobic002G103800 Sobic010G105000--Sobic002G103800 Sobic008G071300 Sobic008G071300 Sobic010G105000--Sobic008G071300 Sobic003G234500--Sobic003G212000 Sobic003G234500--Sobic008G071300 Sobic006G267100 Sobic006G267100 Sobic003G234500--Sobic006G267100 Sobic005G144000 Sobic005G144000 Sobic003G234500--Sobic005G144000 Sobic002G170100 Sobic002G170100 Sobic003G234500--Sobic002G170100 Sobic009G189700 Sobic009G189700 Sobic003G234500--Sobic009G189700 Sobic004G180100 Sobic004G180100 Sobic003G234500--Sobic004G180100 Sobic008G122800 Sobic008G122800 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic003G042800 Sobic003G042800 Sobic007G086900--Sobic003G042800 Sobic006G143900 Sobic006G143900 Sobic007G086900--Sobic006G143900 Sobic004G295050 Sobic004G295050 Sobic007G086900--Sobic004G295050 Sobic004G134000 Sobic004G134000 Sobic007G086900--Sobic004G134000 Sobic003G333100 Sobic003G333100 Sobic007G086900--Sobic003G333100 Sobic007G176900 Sobic007G176900 Sobic007G086900--Sobic007G176900 Sobic004G099200 Sobic004G099200 Sobic007G086900--Sobic004G099200 Sobic009G158400 Sobic009G158400 Sobic007G086900--Sobic009G158400 Sobic006G259100 Sobic006G259100 Sobic007G086900--Sobic006G259100 Sobic003G212000--Sobic003G234500 Sobic003G212000--Sobic008G071300 Sobic002G113200 Sobic002G113200 Sobic003G212000--Sobic002G113200 Sobic003G212000--Sobic006G267100 Sobic003G212000--Sobic009G189700 Sobic003G212000--Sobic005G144000 Sobic001G503600 Sobic001G503600 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic003G212000--Sobic002G170100 Sobic001G106800 Sobic001G106800 Sobic003G024400--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic003G024400--Sobic006G204400 Sobic003G024400--Sobic007G086900 Sobic003G024400--Sobic006G143900 Sobic001G241401 Sobic001G241401 Sobic003G024400--Sobic001G241401 Sobic002G030300 Sobic002G030300 Sobic003G024400--Sobic002G030300 Sobic003G014200 Sobic003G014200 Sobic003G024400--Sobic003G014200 Sobic005G055700 Sobic005G055700 Sobic003G024400--Sobic005G055700 Sobic002G111100 Sobic002G111100 Sobic003G024400--Sobic002G111100 Sobic003G040700 Sobic003G040700 Sobic005G145201--Sobic003G040700 Sobic004G107100 Sobic004G107100 Sobic005G145201--Sobic004G107100 Sobic003G089100 Sobic003G089100 Sobic005G145201--Sobic003G089100 Sobic006G120900 Sobic006G120900 Sobic005G145201--Sobic006G120900 Sobic005G145201--Sobic003G234500 Sobic003G235100 Sobic003G235100 Sobic005G145201--Sobic003G235100 Sobic005G145201--Sobic010G105000 Sobic001G408400 Sobic001G408400 Sobic005G145201--Sobic001G408400 Sobic010G173300 Sobic010G173300 Sobic005G145201--Sobic010G173300 Sobic003G380300--Sobic006G120900 Sobic003G380300--Sobic001G408400 Sobic001G387200 Sobic001G387200 Sobic003G380300--Sobic001G387200 Sobic003G380300--Sobic010G105000 Sobic004G173700 Sobic004G173700 Sobic003G380300--Sobic004G173700 Sobic003G380300--Sobic003G234500 Sobic003G137600 Sobic003G137600 Sobic003G380300--Sobic003G137600 Sobic003G129900 Sobic003G129900 Sobic003G380300--Sobic003G129900 Sobic002G259700 Sobic002G259700 Sobic003G380300--Sobic002G259700 Sobic006G270000--Sobic003G024400 Sobic009G148600 Sobic009G148600 Sobic006G270000--Sobic009G148600 Sobic005G048500 Sobic005G048500 Sobic006G270000--Sobic005G048500 Sobic002G074800 Sobic002G074800 Sobic006G270000--Sobic002G074800 Sobic006G270000--Sobic006G204400 Sobic006G193400 Sobic006G193400 Sobic006G270000--Sobic006G193400 Sobic010G149800 Sobic010G149800 Sobic006G270000--Sobic010G149800 Sobic004G228300 Sobic004G228300 Sobic006G270000--Sobic004G228300 Sobic003G198900 Sobic003G198900 Sobic006G270000--Sobic003G198900 Sobic010G114200 Sobic010G114200 Sobic002G103800--Sobic010G114200 Sobic006G150300 Sobic006G150300 Sobic002G103800--Sobic006G150300 Sobic002G103800--Sobic001G241401 Sobic007G112500 Sobic007G112500 Sobic002G103800--Sobic007G112500 Sobic005G135100 Sobic005G135100 Sobic002G103800--Sobic005G135100 Sobic004G064200 Sobic004G064200 Sobic002G103800--Sobic004G064200 Sobic002G103800--Sobic007G176900 Sobic004G042501 Sobic004G042501 Sobic002G103800--Sobic004G042501 Sobic006G097400 Sobic006G097400 Sobic002G103800--Sobic006G097400 Sobic008G071300--Sobic006G267100 Sobic008G071300--Sobic002G170100 Sobic003G114600 Sobic003G114600 Sobic008G071300--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic008G071300--Sobic002G283200 Sobic003G290500 Sobic003G290500 Sobic008G071300--Sobic003G290500 Sobic001G039100 Sobic001G039100 Sobic008G071300--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic008G071300--Sobic002G340600 Sobic006G105100 Sobic006G105100 Sobic008G071300--Sobic006G105100 Sobic008G071300--Sobic001G503600
Octagon: transcription factors


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