Gene annotation
Transcriptome id Sobic.006G270000.1
Synonym Sb06g033150
Functional annotation expressed protein
UniProt C5YAL5
Pfam -
Panther DB PTHR36053
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21720 : -
RAP-DB (Rice) LOC_Os04g58380.1 : expressed protein
MaizeGDB (Corn) Zm00025a009268
Brachypodium KQK13962 , PNT74382 , PNT74383 , PNT74384 , PNT74385
Barley HORVU2Hr1G118700.8 , HORVU2Hr1G118700.1 , HORVU2Hr1G118700.3 , HORVU2Hr1G118700.2 , HORVU2Hr1G118700.5 , HORVU2Hr1G118700.4 , HORVU2Hr1G118700.7 , HORVU2Hr1G118700.6
Wheat TraesCS2B02G595400 , TraesCS2A02G587800 , TraesCS2A02G587800 , TraesCS2D02G565400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.009G148600 DUF803 domain containing, putative, expressed -
3 Sobic.005G048500 serine esterase family protein, putative, expressed -
4 Sobic.002G074800 - -
5 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
6 Sobic.006G193400 regulatory protein, putative, expressed -
7 Sobic.010G149800 - -
8 Sobic.004G228300 C2 domain containing protein, putative, expressed -
9 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
10 Sobic.010G114200 katanin p60 ATPase-containing subunit, putative, expressed -
11 Sobic.007G086900 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.003G278600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
13 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
14 Sobic.001G241401 - -
15 Sobic.006G050050 - -
16 Sobic.001G308000 viral A-type inclusion protein repeat containing protein, expressed -
17 Sobic.004G261700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
18 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
19 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
20 Sobic.003G010800 C4-dicarboxylate transporter/malic acid transport protein, expressed -


Gene co-expression network
sample Sobic006G270000 Sobic006G270000 Sobic003G024400 Sobic003G024400 Sobic006G270000--Sobic003G024400 Sobic009G148600 Sobic009G148600 Sobic006G270000--Sobic009G148600 Sobic005G048500 Sobic005G048500 Sobic006G270000--Sobic005G048500 Sobic002G074800 Sobic002G074800 Sobic006G270000--Sobic002G074800 Sobic006G204400 Sobic006G204400 Sobic006G270000--Sobic006G204400 Sobic006G193400 Sobic006G193400 Sobic006G270000--Sobic006G193400 Sobic010G149800 Sobic010G149800 Sobic006G270000--Sobic010G149800 Sobic004G228300 Sobic004G228300 Sobic006G270000--Sobic004G228300 Sobic003G198900 Sobic003G198900 Sobic006G270000--Sobic003G198900 Sobic001G106800 Sobic001G106800 Sobic003G024400--Sobic001G106800 Sobic003G024400--Sobic006G204400 Sobic007G086900 Sobic007G086900 Sobic003G024400--Sobic007G086900 Sobic006G143900 Sobic006G143900 Sobic003G024400--Sobic006G143900 Sobic001G241401 Sobic001G241401 Sobic003G024400--Sobic001G241401 Sobic002G030300 Sobic002G030300 Sobic003G024400--Sobic002G030300 Sobic003G014200 Sobic003G014200 Sobic003G024400--Sobic003G014200 Sobic005G055700 Sobic005G055700 Sobic003G024400--Sobic005G055700 Sobic002G111100 Sobic002G111100 Sobic003G024400--Sobic002G111100 Sobic009G148600--Sobic006G193400 Sobic004G298200 Sobic004G298200 Sobic009G148600--Sobic004G298200 Sobic007G212500 Sobic007G212500 Sobic009G148600--Sobic007G212500 Sobic009G148600--Sobic003G024400 Sobic003G244400 Sobic003G244400 Sobic009G148600--Sobic003G244400 Sobic002G192800 Sobic002G192800 Sobic009G148600--Sobic002G192800 Sobic009G148600--Sobic006G204400 Sobic009G178400 Sobic009G178400 Sobic009G148600--Sobic009G178400 Sobic009G148600--Sobic006G143900 Sobic009G206100 Sobic009G206100 Sobic005G048500--Sobic009G206100 Sobic006G150300 Sobic006G150300 Sobic005G048500--Sobic006G150300 Sobic006G001100 Sobic006G001100 Sobic005G048500--Sobic006G001100 Sobic009G229400 Sobic009G229400 Sobic005G048500--Sobic009G229400 Sobic005G048500--Sobic006G193400 Sobic005G048500--Sobic002G074800 Sobic005G048500--Sobic006G143900 Sobic005G048500--Sobic006G204400 Sobic010G114200 Sobic010G114200 Sobic005G048500--Sobic010G114200 Sobic004G064200 Sobic004G064200 Sobic002G074800--Sobic004G064200 Sobic002G074800--Sobic006G001100 Sobic002G074800--Sobic006G204400 Sobic008G136601 Sobic008G136601 Sobic002G074800--Sobic008G136601 Sobic002G074800--Sobic010G114200 Sobic002G074800--Sobic006G143900 Sobic002G074800--Sobic004G228300 Sobic002G074800--Sobic005G048500 Sobic008G136700 Sobic008G136700 Sobic002G074800--Sobic008G136700 Sobic006G204400--Sobic001G106800 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic006G204400--Sobic001G241401 Sobic006G193400--Sobic006G204400 Sobic006G193400--Sobic007G212500 Sobic003G358600 Sobic003G358600 Sobic006G193400--Sobic003G358600 Sobic006G193400--Sobic003G244400 Sobic001G340800 Sobic001G340800 Sobic006G193400--Sobic001G340800 Sobic001G370400 Sobic001G370400 Sobic006G193400--Sobic001G370400 Sobic006G193400--Sobic009G148600 Sobic006G204500 Sobic006G204500 Sobic006G193400--Sobic006G204500 Sobic001G432200 Sobic001G432200 Sobic006G193400--Sobic001G432200 Sobic010G149800--Sobic006G270000 Sobic010G149800--Sobic003G024400 Sobic005G200300 Sobic005G200300 Sobic010G149800--Sobic005G200300 Sobic010G244300 Sobic010G244300 Sobic010G149800--Sobic010G244300 Sobic002G011900 Sobic002G011900 Sobic010G149800--Sobic002G011900 Sobic003G010800 Sobic003G010800 Sobic010G149800--Sobic003G010800 Sobic010G149800--Sobic001G241401 Sobic004G144800 Sobic004G144800 Sobic010G149800--Sobic004G144800 Sobic010G149800--Sobic007G086900 Sobic004G228300--Sobic006G143900 Sobic005G214700 Sobic005G214700 Sobic004G228300--Sobic005G214700 Sobic002G104801 Sobic002G104801 Sobic004G228300--Sobic002G104801 Sobic010G190500 Sobic010G190500 Sobic004G228300--Sobic010G190500 Sobic002G157900 Sobic002G157900 Sobic004G228300--Sobic002G157900 Sobic003G145300 Sobic003G145300 Sobic004G228300--Sobic003G145300 Sobic009G090400 Sobic009G090400 Sobic004G228300--Sobic009G090400 Sobic001G332200 Sobic001G332200 Sobic004G228300--Sobic001G332200 Sobic007G222200 Sobic007G222200 Sobic004G228300--Sobic007G222200 Sobic003G250400 Sobic003G250400 Sobic003G198900--Sobic003G250400 Sobic004G302800 Sobic004G302800 Sobic003G198900--Sobic004G302800 Sobic003G198900--Sobic006G270000 Sobic001G257800 Sobic001G257800 Sobic003G198900--Sobic001G257800 Sobic003G198900--Sobic003G024400 Sobic003G198900--Sobic002G074800 Sobic001G257200 Sobic001G257200 Sobic003G198900--Sobic001G257200 Sobic008G069300 Sobic008G069300 Sobic003G198900--Sobic008G069300 Sobic004G213300 Sobic004G213300 Sobic003G198900--Sobic004G213300
Octagon: transcription factors


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