Gene annotation
Transcriptome id Sobic.003G010800.3,Sobic.003G010800.2
Synonym SLAH3
Functional annotation C4-dicarboxylate transporter/malic acid transport protein, expressed
UniProt A0A1B6Q0Q9 , Q09EK7 , A0A1B6Q0R8
Pfam PF03595
Panther DB PTHR31269 PTHR31269:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0008308voltage-gated anion channel activity GO:0006873cellular ion homeostasis


Orthologs (automatic annotation)
TAIR AT5G24030 : SLAC1 homologue 3
RAP-DB (Rice) LOC_Os01g12680.4 : C4-dicarboxylate transporter/malic acid transport protein, expressed
MaizeGDB (Corn) Zm00025a043265 , Zm00025a044733 , Zm00025a022844 , Zm00025a037581 , Zm00025a036732 , Zm00025a038583 , Zm00025a025514 , Zm00025a010131 , Zm00025a028368
Brachypodium KQK07006 , KQK07007 , KQK04718 , KQK03387 , KQK07008 , KQK07009 , KQK08799 , PNT72420 , KQK08801 , KQK08800
Barley HORVU1Hr1G030060.8 , HORVU1Hr1G030060.9 , HORVU1Hr1G030060.2 , HORVU1Hr1G030060.6 , HORVU1Hr1G030060.4 , HORVU3Hr1G030850.1 , HORVU3Hr1G030850.3 , HORVU3Hr1G030850.2 , HORVU3Hr1G055740.4 , HORVU3Hr1G055740.5 , HORVU3Hr1G055740.6 , HORVU3Hr1G055740.7 , HORVU3Hr1G055740.3 , HORVU3Hr1G055740.8 , HORVU3Hr1G055740.9 , HORVU3Hr1G030840.2 , HORVU3Hr1G030840.3 , HORVU3Hr1G030840.1 , HORVU1Hr1G030060.10 , HORVU1Hr1G030060.11 , HORVU1Hr1G030060.12 , HORVU1Hr1G030060.13 , HORVU3Hr1G055740.1 , HORVU3Hr1G055740.2 , HORVU3Hr1G055740.14 , HORVU3Hr1G055740.15 , HORVU3Hr1G055740.12 , HORVU3Hr1G055740.13 , HORVU3Hr1G055740.10 , HORVU3Hr1G055740.11
Wheat TraesCS3B02G178600 , TraesCS1D02G126500 , TraesCS1A02G127500 , TraesCS3D02G159600 , TraesCS1B02G147400 , TraesCS3D02G228400 , TraesCS3A02G151400 , TraesCS3A02G225100 , TraesCS3B02G254700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
2 Sobic.006G270000 expressed protein -
3 Sobic.002G310900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTPase activating protein, putative, expressed -
4 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
5 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
6 Sobic.010G149800 - -
7 Sobic.010G105000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
8 Sobic.003G291800 hexokinase, putative, expressed K00844: hexokinase
9 Sobic.002G307800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K01931: protein neuralized
10 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
11 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
12 Sobic.006G193400 regulatory protein, putative, expressed -
13 Sobic.009G148600 DUF803 domain containing, putative, expressed -
14 Sobic.001G178100 inositol-1-monophosphatase, putative, expressed K10047: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase
15 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
16 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
17 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
18 Sobic.003G065201 - -
19 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
20 Sobic.002G069000 galactosyltransferase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G010800 Sobic003G010800 Sobic010G134000 Sobic010G134000 Sobic003G010800--Sobic010G134000 Sobic006G270000 Sobic006G270000 Sobic003G010800--Sobic006G270000 Sobic002G310900 Sobic002G310900 Sobic003G010800--Sobic002G310900 Sobic003G433400 Sobic003G433400 Sobic003G010800--Sobic003G433400 Sobic003G403300 Sobic003G403300 Sobic003G010800--Sobic003G403300 Sobic010G149800 Sobic010G149800 Sobic003G010800--Sobic010G149800 Sobic010G105000 Sobic010G105000 Sobic003G010800--Sobic010G105000 Sobic003G291800 Sobic003G291800 Sobic003G010800--Sobic003G291800 Sobic002G307800 Sobic002G307800 Sobic003G010800--Sobic002G307800 Sobic010G134000--Sobic003G010800 Sobic010G134000--Sobic003G433400 Sobic010G134000--Sobic003G403300 Sobic010G134000--Sobic002G310900 Sobic002G407000 Sobic002G407000 Sobic010G134000--Sobic002G407000 Sobic001G411200 Sobic001G411200 Sobic010G134000--Sobic001G411200 Sobic010G134000--Sobic003G291800 Sobic001G178100 Sobic001G178100 Sobic010G134000--Sobic001G178100 Sobic010G134000--Sobic006G270000 Sobic003G024400 Sobic003G024400 Sobic006G270000--Sobic003G024400 Sobic009G148600 Sobic009G148600 Sobic006G270000--Sobic009G148600 Sobic005G048500 Sobic005G048500 Sobic006G270000--Sobic005G048500 Sobic002G074800 Sobic002G074800 Sobic006G270000--Sobic002G074800 Sobic006G204400 Sobic006G204400 Sobic006G270000--Sobic006G204400 Sobic006G193400 Sobic006G193400 Sobic006G270000--Sobic006G193400 Sobic006G270000--Sobic010G149800 Sobic004G228300 Sobic004G228300 Sobic006G270000--Sobic004G228300 Sobic003G198900 Sobic003G198900 Sobic006G270000--Sobic003G198900 Sobic002G310900--Sobic003G010800 Sobic002G310900--Sobic003G403300 Sobic002G310900--Sobic002G307800 Sobic002G310900--Sobic010G134000 Sobic002G310900--Sobic006G270000 Sobic003G027500 Sobic003G027500 Sobic002G310900--Sobic003G027500 Sobic002G310900--Sobic002G407000 Sobic010G165000 Sobic010G165000 Sobic002G310900--Sobic010G165000 Sobic002G310900--Sobic003G433400 Sobic003G433400--Sobic006G270000 Sobic009G217400 Sobic009G217400 Sobic003G433400--Sobic009G217400 Sobic003G433400--Sobic003G010800 Sobic003G433400--Sobic003G291800 Sobic003G433400--Sobic005G048500 Sobic003G235100 Sobic003G235100 Sobic003G433400--Sobic003G235100 Sobic003G092800 Sobic003G092800 Sobic003G433400--Sobic003G092800 Sobic002G069000 Sobic002G069000 Sobic003G433400--Sobic002G069000 Sobic002G084800 Sobic002G084800 Sobic003G433400--Sobic002G084800 Sobic003G403300--Sobic002G310900 Sobic003G403300--Sobic003G010800 Sobic003G403300--Sobic002G307800 Sobic002G098900 Sobic002G098900 Sobic003G403300--Sobic002G098900 Sobic003G403300--Sobic002G407000 Sobic003G403300--Sobic010G134000 Sobic001G067700 Sobic001G067700 Sobic003G403300--Sobic001G067700 Sobic003G403300--Sobic002G069000 Sobic003G403300--Sobic003G198900 Sobic010G149800--Sobic006G270000 Sobic010G149800--Sobic003G024400 Sobic005G200300 Sobic005G200300 Sobic010G149800--Sobic005G200300 Sobic010G244300 Sobic010G244300 Sobic010G149800--Sobic010G244300 Sobic002G011900 Sobic002G011900 Sobic010G149800--Sobic002G011900 Sobic010G149800--Sobic003G010800 Sobic001G241401 Sobic001G241401 Sobic010G149800--Sobic001G241401 Sobic004G144800 Sobic004G144800 Sobic010G149800--Sobic004G144800 Sobic007G086900 Sobic007G086900 Sobic010G149800--Sobic007G086900 Sobic003G234500 Sobic003G234500 Sobic010G105000--Sobic003G234500 Sobic010G105000--Sobic007G086900 Sobic003G212000 Sobic003G212000 Sobic010G105000--Sobic003G212000 Sobic010G105000--Sobic003G024400 Sobic005G145201 Sobic005G145201 Sobic010G105000--Sobic005G145201 Sobic003G380300 Sobic003G380300 Sobic010G105000--Sobic003G380300 Sobic010G105000--Sobic006G270000 Sobic002G103800 Sobic002G103800 Sobic010G105000--Sobic002G103800 Sobic008G071300 Sobic008G071300 Sobic010G105000--Sobic008G071300 Sobic003G291800--Sobic003G433400 Sobic003G044300 Sobic003G044300 Sobic003G291800--Sobic003G044300 Sobic003G291800--Sobic003G010800 Sobic008G069300 Sobic008G069300 Sobic003G291800--Sobic008G069300 Sobic009G046900 Sobic009G046900 Sobic003G291800--Sobic009G046900 Sobic003G291800--Sobic003G092800 Sobic003G421000 Sobic003G421000 Sobic003G291800--Sobic003G421000 Sobic003G291800--Sobic006G270000 Sobic001G539400 Sobic001G539400 Sobic003G291800--Sobic001G539400 Sobic002G307800--Sobic009G217400 Sobic006G250800 Sobic006G250800 Sobic002G307800--Sobic006G250800 Sobic002G307800--Sobic002G310900 Sobic002G307800--Sobic003G403300 Sobic002G307800--Sobic003G010800 Sobic002G307800--Sobic003G198900 Sobic004G302800 Sobic004G302800 Sobic002G307800--Sobic004G302800 Sobic010G007300 Sobic010G007300 Sobic002G307800--Sobic010G007300 Sobic002G307800--Sobic003G433400
Octagon: transcription factors


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