Gene annotation
Transcriptome id Sobic.002G310900.1
Synonym Sb02g034060
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
GTPase activating protein, putative, expressed
UniProt C5X9B1
Pfam PF00168
Panther DB PTHR23180 PTHR23180:SF253
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G48590 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os07g31830.1 : GTPase activating protein, putative, expressed
MaizeGDB (Corn) Zm00025a048138 , Zm00025a014735
Brachypodium KQK16113
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G310900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G010800 C4-dicarboxylate transporter/malic acid transport protein, expressed -
2 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
3 Sobic.002G307800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K01931: protein neuralized
4 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
5 Sobic.006G270000 expressed protein -
6 Sobic.003G027500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
7 Sobic.002G407000 4-alpha-glucanotransferase, putative, expressed K00705: 4-alpha-glucanotransferase
8 Sobic.010G165000 expressed protein -
9 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
10 Sobic.010G007300 hydrolase activity(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase activity(PubMedID : 24655390)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
11 Sobic.001G411200 cat eye syndrome critical region protein 5 precursor, putative, expressed -
12 Sobic.002G069000 galactosyltransferase family protein, putative, expressed -
13 Sobic.010G149800 - -
14 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
15 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
16 Sobic.004G151800 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
17 Sobic.002G098900 phospholipase D, putative, expressed K01115: phospholipase D1/2
18 Sobic.001G067700 amine oxidase-related, putative, expressed -
19 Sobic.004G069000 expressed protein -
20 Sobic.003G391600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic002G310900 Sobic002G310900 Sobic003G010800 Sobic003G010800 Sobic002G310900--Sobic003G010800 Sobic003G403300 Sobic003G403300 Sobic002G310900--Sobic003G403300 Sobic002G307800 Sobic002G307800 Sobic002G310900--Sobic002G307800 Sobic010G134000 Sobic010G134000 Sobic002G310900--Sobic010G134000 Sobic006G270000 Sobic006G270000 Sobic002G310900--Sobic006G270000 Sobic003G027500 Sobic003G027500 Sobic002G310900--Sobic003G027500 Sobic002G407000 Sobic002G407000 Sobic002G310900--Sobic002G407000 Sobic010G165000 Sobic010G165000 Sobic002G310900--Sobic010G165000 Sobic003G433400 Sobic003G433400 Sobic002G310900--Sobic003G433400 Sobic003G010800--Sobic010G134000 Sobic003G010800--Sobic006G270000 Sobic003G010800--Sobic002G310900 Sobic003G010800--Sobic003G433400 Sobic003G010800--Sobic003G403300 Sobic010G149800 Sobic010G149800 Sobic003G010800--Sobic010G149800 Sobic010G105000 Sobic010G105000 Sobic003G010800--Sobic010G105000 Sobic003G291800 Sobic003G291800 Sobic003G010800--Sobic003G291800 Sobic003G010800--Sobic002G307800 Sobic003G403300--Sobic002G310900 Sobic003G403300--Sobic003G010800 Sobic003G403300--Sobic002G307800 Sobic002G098900 Sobic002G098900 Sobic003G403300--Sobic002G098900 Sobic003G403300--Sobic002G407000 Sobic003G403300--Sobic010G134000 Sobic001G067700 Sobic001G067700 Sobic003G403300--Sobic001G067700 Sobic002G069000 Sobic002G069000 Sobic003G403300--Sobic002G069000 Sobic003G198900 Sobic003G198900 Sobic003G403300--Sobic003G198900 Sobic009G217400 Sobic009G217400 Sobic002G307800--Sobic009G217400 Sobic006G250800 Sobic006G250800 Sobic002G307800--Sobic006G250800 Sobic002G307800--Sobic002G310900 Sobic002G307800--Sobic003G403300 Sobic002G307800--Sobic003G010800 Sobic002G307800--Sobic003G198900 Sobic004G302800 Sobic004G302800 Sobic002G307800--Sobic004G302800 Sobic010G007300 Sobic010G007300 Sobic002G307800--Sobic010G007300 Sobic002G307800--Sobic003G433400 Sobic010G134000--Sobic003G010800 Sobic010G134000--Sobic003G433400 Sobic010G134000--Sobic003G403300 Sobic010G134000--Sobic002G310900 Sobic010G134000--Sobic002G407000 Sobic001G411200 Sobic001G411200 Sobic010G134000--Sobic001G411200 Sobic010G134000--Sobic003G291800 Sobic001G178100 Sobic001G178100 Sobic010G134000--Sobic001G178100 Sobic010G134000--Sobic006G270000 Sobic003G024400 Sobic003G024400 Sobic006G270000--Sobic003G024400 Sobic009G148600 Sobic009G148600 Sobic006G270000--Sobic009G148600 Sobic005G048500 Sobic005G048500 Sobic006G270000--Sobic005G048500 Sobic002G074800 Sobic002G074800 Sobic006G270000--Sobic002G074800 Sobic006G204400 Sobic006G204400 Sobic006G270000--Sobic006G204400 Sobic006G193400 Sobic006G193400 Sobic006G270000--Sobic006G193400 Sobic006G270000--Sobic010G149800 Sobic004G228300 Sobic004G228300 Sobic006G270000--Sobic004G228300 Sobic006G270000--Sobic003G198900 Sobic003G027500--Sobic002G310900 Sobic003G391600 Sobic003G391600 Sobic003G027500--Sobic003G391600 Sobic001G536600 Sobic001G536600 Sobic003G027500--Sobic001G536600 Sobic003G027500--Sobic002G307800 Sobic004G151800 Sobic004G151800 Sobic003G027500--Sobic004G151800 Sobic002G181700 Sobic002G181700 Sobic003G027500--Sobic002G181700 Sobic003G027500--Sobic010G007300 Sobic008G173800 Sobic008G173800 Sobic003G027500--Sobic008G173800 Sobic003G134300 Sobic003G134300 Sobic003G027500--Sobic003G134300 Sobic001G201900 Sobic001G201900 Sobic002G407000--Sobic001G201900 Sobic007G113600 Sobic007G113600 Sobic002G407000--Sobic007G113600 Sobic002G407000--Sobic001G178100 Sobic002G407000--Sobic001G411200 Sobic002G407000--Sobic003G403300 Sobic002G407000--Sobic002G098900 Sobic002G407000--Sobic010G134000 Sobic002G407000--Sobic001G067700 Sobic002G407000--Sobic003G010800 Sobic010G165000--Sobic002G310900 Sobic010G165000--Sobic006G270000 Sobic010G165000--Sobic003G010800 Sobic010G165000--Sobic010G149800 Sobic010G165000--Sobic003G024400 Sobic007G226500 Sobic007G226500 Sobic010G165000--Sobic007G226500 Sobic009G044700 Sobic009G044700 Sobic010G165000--Sobic009G044700 Sobic010G165000--Sobic002G069000 Sobic010G165000--Sobic003G198900 Sobic003G433400--Sobic006G270000 Sobic003G433400--Sobic009G217400 Sobic003G433400--Sobic003G010800 Sobic003G433400--Sobic003G291800 Sobic003G433400--Sobic005G048500 Sobic003G235100 Sobic003G235100 Sobic003G433400--Sobic003G235100 Sobic003G092800 Sobic003G092800 Sobic003G433400--Sobic003G092800 Sobic003G433400--Sobic002G069000 Sobic002G084800 Sobic002G084800 Sobic003G433400--Sobic002G084800
Octagon: transcription factors


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