Gene annotation
Transcriptome id Sobic.002G407000.1
Synonym Sb02g042100, DPE2
Functional annotation 4-alpha-glucanotransferase, putative, expressed
UniProt A0A1W0W7T6
Pfam PF00686 PF02446
Panther DB PTHR32518 PTHR32518:SF3
NCBI CDD -
KEGG Orthology K00705; 4-alpha-glucanotransferase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:00041344-alpha-glucanotransferase activity


Orthologs (automatic annotation)
TAIR AT2G40840 : disproportionating enzyme 2
RAP-DB (Rice) LOC_Os07g46790.1 : 4-alpha-glucanotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a039153 , Zm00025a049063 , Zm00025a048074
Brachypodium KQK14795
Barley HORVU2Hr1G021700.10 , HORVU2Hr1G021700.11 , HORVU2Hr1G021700.12 , HORVU2Hr1G021700.13 , HORVU2Hr1G021700.14 , HORVU2Hr1G021700.15 , HORVU2Hr1G021700.16 , HORVU2Hr1G021700.17 , HORVU2Hr1G021700.18 , HORVU2Hr1G021700.19 , HORVU2Hr1G021700.25 , HORVU2Hr1G021700.24 , HORVU2Hr1G021700.27 , HORVU2Hr1G021700.26 , HORVU2Hr1G021700.21 , HORVU2Hr1G021700.20 , HORVU2Hr1G021700.23 , HORVU2Hr1G021700.22 , HORVU2Hr1G021700.29 , HORVU2Hr1G021700.28 , HORVU2Hr1G021700.38 , HORVU2Hr1G021700.39 , HORVU2Hr1G021700.32 , HORVU2Hr1G021700.33 , HORVU2Hr1G021700.30 , HORVU2Hr1G021700.31 , HORVU2Hr1G021700.36 , HORVU2Hr1G021700.37 , HORVU2Hr1G021700.34 , HORVU2Hr1G021700.35 , HORVU2Hr1G021700.2 , HORVU2Hr1G021700.3 , HORVU2Hr1G021700.6 , HORVU2Hr1G021700.7 , HORVU2Hr1G021700.4 , HORVU2Hr1G021700.5 , HORVU2Hr1G021700.8 , HORVU2Hr1G021700.9
Wheat TraesCS2D02G126600 , TraesCS2B02G145700 , TraesCS2A02G123800 , TraesCS2A02G123800
Populus -


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cDNA sequences
Sobic.002G407000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G201900 folylpolyglutamate synthetase, putative, expressed K01930: folylpolyglutamate synthase
2 Sobic.007G113600 adenylate kinase family protein(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase family protein, putative, expressed K00939: adk, adenylate kinase
3 Sobic.001G178100 inositol-1-monophosphatase, putative, expressed K10047: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase
4 Sobic.001G411200 cat eye syndrome critical region protein 5 precursor, putative, expressed -
5 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
6 Sobic.002G098900 phospholipase D, putative, expressed K01115: phospholipase D1/2
7 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
8 Sobic.001G067700 amine oxidase-related, putative, expressed -
9 Sobic.003G010800 C4-dicarboxylate transporter/malic acid transport protein, expressed -
10 Sobic.002G310900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTPase activating protein, putative, expressed -
11 Sobic.008G050400 5-formyltetrahydrofolate cyclo-ligase, putative, expressed -
12 Sobic.004G206100 transmembrane protein 17, putative, expressed K16833: PPP1R2, protein phosphatase inhibitor 2
13 Sobic.004G151800 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
14 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1
15 Sobic.004G069000 expressed protein -
16 Sobic.010G125866 - -
17 Sobic.003G402000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.002G181600 expressed protein -
19 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
20 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase


Gene co-expression network
sample Sobic002G407000 Sobic002G407000 Sobic001G201900 Sobic001G201900 Sobic002G407000--Sobic001G201900 Sobic007G113600 Sobic007G113600 Sobic002G407000--Sobic007G113600 Sobic001G178100 Sobic001G178100 Sobic002G407000--Sobic001G178100 Sobic001G411200 Sobic001G411200 Sobic002G407000--Sobic001G411200 Sobic003G403300 Sobic003G403300 Sobic002G407000--Sobic003G403300 Sobic002G098900 Sobic002G098900 Sobic002G407000--Sobic002G098900 Sobic010G134000 Sobic010G134000 Sobic002G407000--Sobic010G134000 Sobic001G067700 Sobic001G067700 Sobic002G407000--Sobic001G067700 Sobic003G010800 Sobic003G010800 Sobic002G407000--Sobic003G010800 Sobic001G201900--Sobic002G407000 Sobic008G119250 Sobic008G119250 Sobic001G201900--Sobic008G119250 Sobic001G201900--Sobic007G113600 Sobic001G201900--Sobic001G178100 Sobic005G111700 Sobic005G111700 Sobic001G201900--Sobic005G111700 Sobic001G513800 Sobic001G513800 Sobic001G201900--Sobic001G513800 Sobic004G064300 Sobic004G064300 Sobic001G201900--Sobic004G064300 Sobic001G116500 Sobic001G116500 Sobic001G201900--Sobic001G116500 Sobic001G201900--Sobic003G403300 Sobic001G167900 Sobic001G167900 Sobic007G113600--Sobic001G167900 Sobic004G124400 Sobic004G124400 Sobic007G113600--Sobic004G124400 Sobic002G351600 Sobic002G351600 Sobic007G113600--Sobic002G351600 Sobic007G113600--Sobic002G407000 Sobic002G061900 Sobic002G061900 Sobic007G113600--Sobic002G061900 Sobic001G436400 Sobic001G436400 Sobic007G113600--Sobic001G436400 Sobic008G050400 Sobic008G050400 Sobic007G113600--Sobic008G050400 Sobic004G359600 Sobic004G359600 Sobic007G113600--Sobic004G359600 Sobic007G130400 Sobic007G130400 Sobic007G113600--Sobic007G130400 Sobic001G178100--Sobic002G407000 Sobic009G127500 Sobic009G127500 Sobic001G178100--Sobic009G127500 Sobic001G178100--Sobic001G067700 Sobic001G178100--Sobic003G010800 Sobic001G178100--Sobic001G201900 Sobic003G291800 Sobic003G291800 Sobic001G178100--Sobic003G291800 Sobic001G178100--Sobic001G116500 Sobic001G178100--Sobic010G134000 Sobic007G069101 Sobic007G069101 Sobic001G178100--Sobic007G069101 Sobic001G411200--Sobic002G407000 Sobic004G151800 Sobic004G151800 Sobic001G411200--Sobic004G151800 Sobic004G151300 Sobic004G151300 Sobic001G411200--Sobic004G151300 Sobic001G345100 Sobic001G345100 Sobic001G411200--Sobic001G345100 Sobic003G150500 Sobic003G150500 Sobic001G411200--Sobic003G150500 Sobic002G252300 Sobic002G252300 Sobic001G411200--Sobic002G252300 Sobic010G150100 Sobic010G150100 Sobic001G411200--Sobic010G150100 Sobic001G411200--Sobic010G134000 Sobic004G143300 Sobic004G143300 Sobic001G411200--Sobic004G143300 Sobic002G310900 Sobic002G310900 Sobic003G403300--Sobic002G310900 Sobic003G403300--Sobic003G010800 Sobic002G307800 Sobic002G307800 Sobic003G403300--Sobic002G307800 Sobic003G403300--Sobic002G098900 Sobic003G403300--Sobic002G407000 Sobic003G403300--Sobic010G134000 Sobic003G403300--Sobic001G067700 Sobic002G069000 Sobic002G069000 Sobic003G403300--Sobic002G069000 Sobic003G198900 Sobic003G198900 Sobic003G403300--Sobic003G198900 Sobic002G098900--Sobic003G403300 Sobic002G098900--Sobic002G407000 Sobic002G098900--Sobic001G067700 Sobic001G198400 Sobic001G198400 Sobic002G098900--Sobic001G198400 Sobic002G376600 Sobic002G376600 Sobic002G098900--Sobic002G376600 Sobic003G092800 Sobic003G092800 Sobic002G098900--Sobic003G092800 Sobic008G069300 Sobic008G069300 Sobic002G098900--Sobic008G069300 Sobic002G098900--Sobic003G198900 Sobic003G134300 Sobic003G134300 Sobic002G098900--Sobic003G134300 Sobic010G134000--Sobic003G010800 Sobic003G433400 Sobic003G433400 Sobic010G134000--Sobic003G433400 Sobic010G134000--Sobic003G403300 Sobic010G134000--Sobic002G310900 Sobic010G134000--Sobic002G407000 Sobic010G134000--Sobic001G411200 Sobic010G134000--Sobic003G291800 Sobic010G134000--Sobic001G178100 Sobic006G270000 Sobic006G270000 Sobic010G134000--Sobic006G270000 Sobic001G067700--Sobic003G403300 Sobic001G067700--Sobic002G407000 Sobic001G067700--Sobic002G098900 Sobic001G067700--Sobic001G178100 Sobic008G018700 Sobic008G018700 Sobic001G067700--Sobic008G018700 Sobic001G067700--Sobic003G010800 Sobic002G181600 Sobic002G181600 Sobic001G067700--Sobic002G181600 Sobic001G067700--Sobic002G310900 Sobic001G067700--Sobic005G111700 Sobic003G010800--Sobic010G134000 Sobic003G010800--Sobic006G270000 Sobic003G010800--Sobic002G310900 Sobic003G010800--Sobic003G433400 Sobic003G010800--Sobic003G403300 Sobic010G149800 Sobic010G149800 Sobic003G010800--Sobic010G149800 Sobic010G105000 Sobic010G105000 Sobic003G010800--Sobic010G105000 Sobic003G010800--Sobic003G291800 Sobic003G010800--Sobic002G307800
Octagon: transcription factors


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