Gene annotation
Transcriptome id Sobic.001G067700.1
Synonym
Functional annotation amine oxidase-related, putative, expressed
UniProt A0A1B6QHN9
Pfam PF13450
Panther DB PTHR16128 PTHR16128:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56000 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os03g57070.2 : amine oxidase-related, putative, expressed
MaizeGDB (Corn) Zm00025a008439
Brachypodium PNT74022 , PNT74021 , PNT74027 , PNT74026 , PNT74025 , PNT74029 , PNT74028 , KQK12884 , PNT74030 , PNT74031
Barley -
Wheat TraesCS5A02G421900 , TraesCS5A02G421900 , TraesCS5A02G421900 , TraesCS5B02G423800 , TraesCS5B02G423800
Populus -


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cDNA sequences
Sobic.001G067700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
2 Sobic.002G407000 4-alpha-glucanotransferase, putative, expressed K00705: 4-alpha-glucanotransferase
3 Sobic.002G098900 phospholipase D, putative, expressed K01115: phospholipase D1/2
4 Sobic.001G178100 inositol-1-monophosphatase, putative, expressed K10047: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase
5 Sobic.008G018700 expressed protein -
6 Sobic.003G010800 C4-dicarboxylate transporter/malic acid transport protein, expressed -
7 Sobic.002G181600 expressed protein -
8 Sobic.002G310900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTPase activating protein, putative, expressed -
9 Sobic.005G111700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
10 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
11 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
12 Sobic.002G376600 paramyosin, putative, expressed -
13 Sobic.003G402000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
14 Sobic.003G421000 - -
15 Sobic.002G252300 expressed protein -
16 Sobic.002G047500 galactose-1-phosphate uridyl transferase, putative, expressed K00965: galT, UDPglucose--hexose-1-phosphate uridylyltransferase
17 Sobic.009G127500 Alpha amylase, catalytic domain containing protein, expressed -
18 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
19 Sobic.006G008700 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed K13811: 3'-phosphoadenosine 5'-phosphosulfate synthase
20 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -


Gene co-expression network
sample Sobic001G067700 Sobic001G067700 Sobic003G403300 Sobic003G403300 Sobic001G067700--Sobic003G403300 Sobic002G407000 Sobic002G407000 Sobic001G067700--Sobic002G407000 Sobic002G098900 Sobic002G098900 Sobic001G067700--Sobic002G098900 Sobic001G178100 Sobic001G178100 Sobic001G067700--Sobic001G178100 Sobic008G018700 Sobic008G018700 Sobic001G067700--Sobic008G018700 Sobic003G010800 Sobic003G010800 Sobic001G067700--Sobic003G010800 Sobic002G181600 Sobic002G181600 Sobic001G067700--Sobic002G181600 Sobic002G310900 Sobic002G310900 Sobic001G067700--Sobic002G310900 Sobic005G111700 Sobic005G111700 Sobic001G067700--Sobic005G111700 Sobic003G403300--Sobic002G310900 Sobic003G403300--Sobic003G010800 Sobic002G307800 Sobic002G307800 Sobic003G403300--Sobic002G307800 Sobic003G403300--Sobic002G098900 Sobic003G403300--Sobic002G407000 Sobic010G134000 Sobic010G134000 Sobic003G403300--Sobic010G134000 Sobic003G403300--Sobic001G067700 Sobic002G069000 Sobic002G069000 Sobic003G403300--Sobic002G069000 Sobic003G198900 Sobic003G198900 Sobic003G403300--Sobic003G198900 Sobic001G201900 Sobic001G201900 Sobic002G407000--Sobic001G201900 Sobic007G113600 Sobic007G113600 Sobic002G407000--Sobic007G113600 Sobic002G407000--Sobic001G178100 Sobic001G411200 Sobic001G411200 Sobic002G407000--Sobic001G411200 Sobic002G407000--Sobic003G403300 Sobic002G407000--Sobic002G098900 Sobic002G407000--Sobic010G134000 Sobic002G407000--Sobic001G067700 Sobic002G407000--Sobic003G010800 Sobic002G098900--Sobic003G403300 Sobic002G098900--Sobic002G407000 Sobic002G098900--Sobic001G067700 Sobic001G198400 Sobic001G198400 Sobic002G098900--Sobic001G198400 Sobic002G376600 Sobic002G376600 Sobic002G098900--Sobic002G376600 Sobic003G092800 Sobic003G092800 Sobic002G098900--Sobic003G092800 Sobic008G069300 Sobic008G069300 Sobic002G098900--Sobic008G069300 Sobic002G098900--Sobic003G198900 Sobic003G134300 Sobic003G134300 Sobic002G098900--Sobic003G134300 Sobic001G178100--Sobic002G407000 Sobic009G127500 Sobic009G127500 Sobic001G178100--Sobic009G127500 Sobic001G178100--Sobic001G067700 Sobic001G178100--Sobic003G010800 Sobic001G178100--Sobic001G201900 Sobic003G291800 Sobic003G291800 Sobic001G178100--Sobic003G291800 Sobic001G116500 Sobic001G116500 Sobic001G178100--Sobic001G116500 Sobic001G178100--Sobic010G134000 Sobic007G069101 Sobic007G069101 Sobic001G178100--Sobic007G069101 Sobic004G056800 Sobic004G056800 Sobic008G018700--Sobic004G056800 Sobic010G109800 Sobic010G109800 Sobic008G018700--Sobic010G109800 Sobic003G421000 Sobic003G421000 Sobic008G018700--Sobic003G421000 Sobic002G095600 Sobic002G095600 Sobic008G018700--Sobic002G095600 Sobic007G226500 Sobic007G226500 Sobic008G018700--Sobic007G226500 Sobic006G079800 Sobic006G079800 Sobic008G018700--Sobic006G079800 Sobic008G018700--Sobic001G067700 Sobic001G257200 Sobic001G257200 Sobic008G018700--Sobic001G257200 Sobic001G307500 Sobic001G307500 Sobic008G018700--Sobic001G307500 Sobic003G010800--Sobic010G134000 Sobic006G270000 Sobic006G270000 Sobic003G010800--Sobic006G270000 Sobic003G010800--Sobic002G310900 Sobic003G433400 Sobic003G433400 Sobic003G010800--Sobic003G433400 Sobic003G010800--Sobic003G403300 Sobic010G149800 Sobic010G149800 Sobic003G010800--Sobic010G149800 Sobic010G105000 Sobic010G105000 Sobic003G010800--Sobic010G105000 Sobic003G010800--Sobic003G291800 Sobic003G010800--Sobic002G307800 Sobic006G274800 Sobic006G274800 Sobic002G181600--Sobic006G274800 Sobic003G354600 Sobic003G354600 Sobic002G181600--Sobic003G354600 Sobic001G532600 Sobic001G532600 Sobic002G181600--Sobic001G532600 Sobic002G181600--Sobic002G376600 Sobic008G087900 Sobic008G087900 Sobic002G181600--Sobic008G087900 Sobic001G136800 Sobic001G136800 Sobic002G181600--Sobic001G136800 Sobic006G039400 Sobic006G039400 Sobic002G181600--Sobic006G039400 Sobic004G033700 Sobic004G033700 Sobic002G181600--Sobic004G033700 Sobic002G335000 Sobic002G335000 Sobic002G181600--Sobic002G335000 Sobic002G310900--Sobic003G010800 Sobic002G310900--Sobic003G403300 Sobic002G310900--Sobic002G307800 Sobic002G310900--Sobic010G134000 Sobic002G310900--Sobic006G270000 Sobic003G027500 Sobic003G027500 Sobic002G310900--Sobic003G027500 Sobic002G310900--Sobic002G407000 Sobic010G165000 Sobic010G165000 Sobic002G310900--Sobic010G165000 Sobic002G310900--Sobic003G433400 Sobic005G111700--Sobic001G116500 Sobic001G095000 Sobic001G095000 Sobic005G111700--Sobic001G095000 Sobic005G150600 Sobic005G150600 Sobic005G111700--Sobic005G150600 Sobic002G388000 Sobic002G388000 Sobic005G111700--Sobic002G388000 Sobic005G111700--Sobic001G201900 Sobic003G402000 Sobic003G402000 Sobic005G111700--Sobic003G402000 Sobic005G111700--Sobic002G335000 Sobic005G111700--Sobic003G403300 Sobic004G320700 Sobic004G320700 Sobic005G111700--Sobic004G320700
Octagon: transcription factors


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