Gene annotation
Transcriptome id Sobic.003G421000.1
Synonym
Functional annotation -
UniProt A0A1B6Q854
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium KQK11477
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G018700 expressed protein -
2 Sobic.003G291800 hexokinase, putative, expressed K00844: hexokinase
3 Sobic.010G109800 - -
4 Sobic.006G079800 OsFBX199 - F-box domain containing protein, expressed -
5 Sobic.008G069300 - -
6 Sobic.003G044300 D-tyrosyl-tRNA, putative, expressed K07560: dtd, D-aminoacyl-tRNA deacylase
7 Sobic.010G034600 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.001G257200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
9 Sobic.003G163301 - -
10 Sobic.004G056800 DEFL1 - Defensin and Defensin-like DEFL family, expressed -
11 Sobic.007G226500 spotted leaf 11, putative, expressed -
12 Sobic.009G044700 DTA2, putative, expressed -
13 Sobic.005G003600 - -
14 Sobic.005G076800 OsFBX412 - F-box domain containing protein, expressed -
15 Sobic.009G085300 - -
16 Sobic.010G149800 - -
17 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
18 Sobic.010G109400 acylphosphatase, putative, expressed K01512: acylphosphatase
19 Sobic.002G095600 metal transporter Nramp6, putative, expressed -
20 Sobic.003G010800 C4-dicarboxylate transporter/malic acid transport protein, expressed -


Gene co-expression network
sample Sobic003G421000 Sobic003G421000 Sobic008G018700 Sobic008G018700 Sobic003G421000--Sobic008G018700 Sobic003G291800 Sobic003G291800 Sobic003G421000--Sobic003G291800 Sobic010G109800 Sobic010G109800 Sobic003G421000--Sobic010G109800 Sobic006G079800 Sobic006G079800 Sobic003G421000--Sobic006G079800 Sobic008G069300 Sobic008G069300 Sobic003G421000--Sobic008G069300 Sobic003G044300 Sobic003G044300 Sobic003G421000--Sobic003G044300 Sobic010G034600 Sobic010G034600 Sobic003G421000--Sobic010G034600 Sobic001G257200 Sobic001G257200 Sobic003G421000--Sobic001G257200 Sobic003G163301 Sobic003G163301 Sobic003G421000--Sobic003G163301 Sobic004G056800 Sobic004G056800 Sobic008G018700--Sobic004G056800 Sobic008G018700--Sobic010G109800 Sobic008G018700--Sobic003G421000 Sobic002G095600 Sobic002G095600 Sobic008G018700--Sobic002G095600 Sobic007G226500 Sobic007G226500 Sobic008G018700--Sobic007G226500 Sobic008G018700--Sobic006G079800 Sobic001G067700 Sobic001G067700 Sobic008G018700--Sobic001G067700 Sobic008G018700--Sobic001G257200 Sobic001G307500 Sobic001G307500 Sobic008G018700--Sobic001G307500 Sobic003G433400 Sobic003G433400 Sobic003G291800--Sobic003G433400 Sobic003G291800--Sobic003G044300 Sobic003G010800 Sobic003G010800 Sobic003G291800--Sobic003G010800 Sobic003G291800--Sobic008G069300 Sobic009G046900 Sobic009G046900 Sobic003G291800--Sobic009G046900 Sobic003G092800 Sobic003G092800 Sobic003G291800--Sobic003G092800 Sobic003G291800--Sobic003G421000 Sobic006G270000 Sobic006G270000 Sobic003G291800--Sobic006G270000 Sobic001G539400 Sobic001G539400 Sobic003G291800--Sobic001G539400 Sobic010G109800--Sobic001G307500 Sobic010G109800--Sobic001G257200 Sobic010G109800--Sobic006G079800 Sobic005G076800 Sobic005G076800 Sobic010G109800--Sobic005G076800 Sobic003G024400 Sobic003G024400 Sobic010G109800--Sobic003G024400 Sobic001G106800 Sobic001G106800 Sobic010G109800--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic010G109800--Sobic006G204400 Sobic010G109800--Sobic002G095600 Sobic002G192800 Sobic002G192800 Sobic010G109800--Sobic002G192800 Sobic006G079800--Sobic010G109800 Sobic006G079800--Sobic001G257200 Sobic006G079800--Sobic001G307500 Sobic006G079800--Sobic005G076800 Sobic001G398200 Sobic001G398200 Sobic006G079800--Sobic001G398200 Sobic006G079800--Sobic001G106800 Sobic006G079800--Sobic003G024400 Sobic009G044700 Sobic009G044700 Sobic006G079800--Sobic009G044700 Sobic002G180800 Sobic002G180800 Sobic006G079800--Sobic002G180800 Sobic008G069300--Sobic009G046900 Sobic002G074800 Sobic002G074800 Sobic008G069300--Sobic002G074800 Sobic003G428000 Sobic003G428000 Sobic008G069300--Sobic003G428000 Sobic009G148600 Sobic009G148600 Sobic008G069300--Sobic009G148600 Sobic008G069300--Sobic010G109800 Sobic009G229400 Sobic009G229400 Sobic008G069300--Sobic009G229400 Sobic003G198900 Sobic003G198900 Sobic008G069300--Sobic003G198900 Sobic009G156800 Sobic009G156800 Sobic008G069300--Sobic009G156800 Sobic008G069300--Sobic006G270000 Sobic003G044300--Sobic003G291800 Sobic006G162400 Sobic006G162400 Sobic003G044300--Sobic006G162400 Sobic010G274800 Sobic010G274800 Sobic003G044300--Sobic010G274800 Sobic003G044300--Sobic009G046900 Sobic003G044300--Sobic008G069300 Sobic002G135000 Sobic002G135000 Sobic003G044300--Sobic002G135000 Sobic010G277700 Sobic010G277700 Sobic003G044300--Sobic010G277700 Sobic006G134500 Sobic006G134500 Sobic003G044300--Sobic006G134500 Sobic003G044300--Sobic001G539400 Sobic010G034600--Sobic004G056800 Sobic010G034600--Sobic003G421000 Sobic010G034600--Sobic008G018700 Sobic001G323701 Sobic001G323701 Sobic010G034600--Sobic001G323701 Sobic010G034600--Sobic007G226500 Sobic002G098900 Sobic002G098900 Sobic010G034600--Sobic002G098900 Sobic010G034600--Sobic010G109800 Sobic010G034600--Sobic006G079800 Sobic010G034600--Sobic001G067700 Sobic005G135100 Sobic005G135100 Sobic001G257200--Sobic005G135100 Sobic001G257200--Sobic001G106800 Sobic001G257200--Sobic002G192800 Sobic001G257200--Sobic006G204400 Sobic008G136601 Sobic008G136601 Sobic001G257200--Sobic008G136601 Sobic001G257200--Sobic003G024400 Sobic001G257200--Sobic002G074800 Sobic006G001100 Sobic006G001100 Sobic001G257200--Sobic006G001100 Sobic001G257200--Sobic001G307500 Sobic001G292900 Sobic001G292900 Sobic003G163301--Sobic001G292900 Sobic003G163301--Sobic003G433400 Sobic003G163301--Sobic003G421000 Sobic003G163301--Sobic008G069300 Sobic003G163301--Sobic003G291800 Sobic003G163301--Sobic001G539400 Sobic005G226300 Sobic005G226300 Sobic003G163301--Sobic005G226300 Sobic003G065201 Sobic003G065201 Sobic003G163301--Sobic003G065201 Sobic003G163301--Sobic007G226500
Octagon: transcription factors


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