Gene annotation
Transcriptome id Sobic.003G044300.1
Synonym Sb03g003890
Functional annotation D-tyrosyl-tRNA, putative, expressed
UniProt C5XMR3
Pfam PF02580
Panther DB PTHR10472
NCBI CDD KOG3323; D-Tyr-tRNA (Tyr) deacylase
KEGG Orthology K07560; dtd, D-aminoacyl-tRNA deacylase
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT4G18460 : D-Tyr-tRNA(Tyr) deacylase family protein
RAP-DB (Rice) LOC_Os01g14040.1 : D-tyrosyl-tRNA, putative, expressed
MaizeGDB (Corn) Zm00025a023192
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G291800 hexokinase, putative, expressed K00844: hexokinase
2 Sobic.006G162400 expressed protein -
3 Sobic.010G274800 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
4 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
5 Sobic.008G069300 - -
6 Sobic.002G135000 expressed protein -
7 Sobic.010G277700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
8 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
9 Sobic.001G539400 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
10 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
11 Sobic.003G358600 similar to Phosphorylase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
12 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
13 Sobic.001G453600 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
14 Sobic.007G085700 - -
15 Sobic.006G071362 - K02021: putative ABC transport system ATP-binding protein
16 Sobic.010G130601 - -
17 Sobic.005G003600 - -
18 Sobic.002G259700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
19 Sobic.004G162500 SAM domain family protein, expressed -
20 Sobic.003G242700 - -


Gene co-expression network
sample Sobic003G044300 Sobic003G044300 Sobic003G291800 Sobic003G291800 Sobic003G044300--Sobic003G291800 Sobic006G162400 Sobic006G162400 Sobic003G044300--Sobic006G162400 Sobic010G274800 Sobic010G274800 Sobic003G044300--Sobic010G274800 Sobic009G046900 Sobic009G046900 Sobic003G044300--Sobic009G046900 Sobic008G069300 Sobic008G069300 Sobic003G044300--Sobic008G069300 Sobic002G135000 Sobic002G135000 Sobic003G044300--Sobic002G135000 Sobic010G277700 Sobic010G277700 Sobic003G044300--Sobic010G277700 Sobic006G134500 Sobic006G134500 Sobic003G044300--Sobic006G134500 Sobic001G539400 Sobic001G539400 Sobic003G044300--Sobic001G539400 Sobic003G433400 Sobic003G433400 Sobic003G291800--Sobic003G433400 Sobic003G291800--Sobic003G044300 Sobic003G010800 Sobic003G010800 Sobic003G291800--Sobic003G010800 Sobic003G291800--Sobic008G069300 Sobic003G291800--Sobic009G046900 Sobic003G092800 Sobic003G092800 Sobic003G291800--Sobic003G092800 Sobic003G421000 Sobic003G421000 Sobic003G291800--Sobic003G421000 Sobic006G270000 Sobic006G270000 Sobic003G291800--Sobic006G270000 Sobic003G291800--Sobic001G539400 Sobic001G453600 Sobic001G453600 Sobic006G162400--Sobic001G453600 Sobic004G046800 Sobic004G046800 Sobic006G162400--Sobic004G046800 Sobic006G162400--Sobic006G134500 Sobic001G356200 Sobic001G356200 Sobic006G162400--Sobic001G356200 Sobic006G162400--Sobic009G046900 Sobic010G255900 Sobic010G255900 Sobic006G162400--Sobic010G255900 Sobic004G113600 Sobic004G113600 Sobic006G162400--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic006G162400--Sobic001G387300 Sobic010G130601 Sobic010G130601 Sobic006G162400--Sobic010G130601 Sobic001G308500 Sobic001G308500 Sobic010G274800--Sobic001G308500 Sobic010G274800--Sobic009G046900 Sobic001G149000 Sobic001G149000 Sobic010G274800--Sobic001G149000 Sobic003G428000 Sobic003G428000 Sobic010G274800--Sobic003G428000 Sobic004G194400 Sobic004G194400 Sobic010G274800--Sobic004G194400 Sobic006G265800 Sobic006G265800 Sobic010G274800--Sobic006G265800 Sobic006G071362 Sobic006G071362 Sobic010G274800--Sobic006G071362 Sobic010G086300 Sobic010G086300 Sobic010G274800--Sobic010G086300 Sobic010G274800--Sobic006G134500 Sobic009G046900--Sobic001G149000 Sobic009G178400 Sobic009G178400 Sobic009G046900--Sobic009G178400 Sobic002G233600 Sobic002G233600 Sobic009G046900--Sobic002G233600 Sobic009G046900--Sobic006G134500 Sobic002G074800 Sobic002G074800 Sobic009G046900--Sobic002G074800 Sobic003G385300 Sobic003G385300 Sobic009G046900--Sobic003G385300 Sobic001G384200 Sobic001G384200 Sobic009G046900--Sobic001G384200 Sobic006G193400 Sobic006G193400 Sobic009G046900--Sobic006G193400 Sobic003G358600 Sobic003G358600 Sobic009G046900--Sobic003G358600 Sobic008G069300--Sobic009G046900 Sobic008G069300--Sobic002G074800 Sobic008G069300--Sobic003G428000 Sobic009G148600 Sobic009G148600 Sobic008G069300--Sobic009G148600 Sobic010G109800 Sobic010G109800 Sobic008G069300--Sobic010G109800 Sobic009G229400 Sobic009G229400 Sobic008G069300--Sobic009G229400 Sobic003G198900 Sobic003G198900 Sobic008G069300--Sobic003G198900 Sobic009G156800 Sobic009G156800 Sobic008G069300--Sobic009G156800 Sobic008G069300--Sobic006G270000 Sobic007G018651 Sobic007G018651 Sobic002G135000--Sobic007G018651 Sobic002G135000--Sobic010G130601 Sobic010G124900 Sobic010G124900 Sobic002G135000--Sobic010G124900 Sobic003G391000 Sobic003G391000 Sobic002G135000--Sobic003G391000 Sobic005G174750 Sobic005G174750 Sobic002G135000--Sobic005G174750 Sobic002G226800 Sobic002G226800 Sobic002G135000--Sobic002G226800 Sobic002G135000--Sobic004G046800 Sobic005G041450 Sobic005G041450 Sobic002G135000--Sobic005G041450 Sobic002G135000--Sobic003G044300 Sobic010G277700--Sobic006G071362 Sobic010G277700--Sobic004G194400 Sobic010G277700--Sobic006G134500 Sobic010G134650 Sobic010G134650 Sobic010G277700--Sobic010G134650 Sobic010G277700--Sobic009G046900 Sobic008G022400 Sobic008G022400 Sobic010G277700--Sobic008G022400 Sobic004G189000 Sobic004G189000 Sobic010G277700--Sobic004G189000 Sobic010G277700--Sobic010G130601 Sobic010G112600 Sobic010G112600 Sobic010G277700--Sobic010G112600 Sobic006G134500--Sobic006G265800 Sobic006G134500--Sobic001G384200 Sobic003G024100 Sobic003G024100 Sobic006G134500--Sobic003G024100 Sobic006G134500--Sobic004G194400 Sobic001G400000 Sobic001G400000 Sobic006G134500--Sobic001G400000 Sobic006G134500--Sobic004G113600 Sobic001G340800 Sobic001G340800 Sobic006G134500--Sobic001G340800 Sobic003G175350 Sobic003G175350 Sobic006G134500--Sobic003G175350 Sobic006G134500--Sobic006G071362 Sobic008G054700 Sobic008G054700 Sobic001G539400--Sobic008G054700 Sobic003G065201 Sobic003G065201 Sobic001G539400--Sobic003G065201 Sobic008G007700 Sobic008G007700 Sobic001G539400--Sobic008G007700 Sobic001G539400--Sobic003G358600 Sobic001G539400--Sobic005G174750 Sobic001G539400--Sobic006G193400 Sobic001G539400--Sobic009G178400 Sobic001G539400--Sobic009G229400 Sobic001G539400--Sobic001G387300
Octagon: transcription factors


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