Gene annotation
Transcriptome id Sobic.003G242700.1
Synonym
Functional annotation -
UniProt C5XFA7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G242700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G156100 - -
2 Sobic.006G005200 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
3 Sobic.007G085700 - -
4 Sobic.003G377500 OsFBX10 - F-box domain containing protein, expressed -
5 Sobic.003G044300 D-tyrosyl-tRNA, putative, expressed K07560: dtd, D-aminoacyl-tRNA deacylase
6 Sobic.007G022600 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
7 Sobic.003G092800 white-brown complex homolog protein 7, putative, expressed -
8 Sobic.004G130300 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
9 Sobic.007G076400 expressed protein -
10 Sobic.002G084800 expressed protein -
11 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
12 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
13 Sobic.002G138300 expressed protein -
14 Sobic.007G157500 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.004G162500 SAM domain family protein, expressed -
16 Sobic.005G023800 expressed protein -
17 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
18 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
19 Sobic.001G532600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
20 Sobic.009G113400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytochrome A-associated F-box protein, putative, expressed -


Gene co-expression network
sample Sobic003G242700 Sobic003G242700 Sobic009G156100 Sobic009G156100 Sobic003G242700--Sobic009G156100 Sobic006G005200 Sobic006G005200 Sobic003G242700--Sobic006G005200 Sobic007G085700 Sobic007G085700 Sobic003G242700--Sobic007G085700 Sobic003G377500 Sobic003G377500 Sobic003G242700--Sobic003G377500 Sobic003G044300 Sobic003G044300 Sobic003G242700--Sobic003G044300 Sobic007G022600 Sobic007G022600 Sobic003G242700--Sobic007G022600 Sobic003G092800 Sobic003G092800 Sobic003G242700--Sobic003G092800 Sobic004G130300 Sobic004G130300 Sobic003G242700--Sobic004G130300 Sobic007G076400 Sobic007G076400 Sobic003G242700--Sobic007G076400 Sobic009G156100--Sobic003G377500 Sobic004G068100 Sobic004G068100 Sobic009G156100--Sobic004G068100 Sobic001G114200 Sobic001G114200 Sobic009G156100--Sobic001G114200 Sobic008G116700 Sobic008G116700 Sobic009G156100--Sobic008G116700 Sobic006G060000 Sobic006G060000 Sobic009G156100--Sobic006G060000 Sobic009G156100--Sobic007G076400 Sobic003G181700 Sobic003G181700 Sobic009G156100--Sobic003G181700 Sobic009G156100--Sobic006G005200 Sobic002G200000 Sobic002G200000 Sobic009G156100--Sobic002G200000 Sobic006G005200--Sobic006G060000 Sobic006G005200--Sobic009G156100 Sobic006G005200--Sobic003G377500 Sobic006G005200--Sobic001G114200 Sobic008G055500 Sobic008G055500 Sobic006G005200--Sobic008G055500 Sobic006G005200--Sobic002G200000 Sobic009G046900 Sobic009G046900 Sobic006G005200--Sobic009G046900 Sobic003G117800 Sobic003G117800 Sobic006G005200--Sobic003G117800 Sobic004G263500 Sobic004G263500 Sobic006G005200--Sobic004G263500 Sobic007G085700--Sobic003G242700 Sobic007G085700--Sobic009G156100 Sobic007G085700--Sobic007G076400 Sobic007G085700--Sobic003G044300 Sobic003G235100 Sobic003G235100 Sobic007G085700--Sobic003G235100 Sobic007G085700--Sobic003G092800 Sobic007G085700--Sobic007G022600 Sobic007G085700--Sobic006G060000 Sobic001G292900 Sobic001G292900 Sobic007G085700--Sobic001G292900 Sobic003G377500--Sobic009G156100 Sobic003G377500--Sobic001G114200 Sobic003G377500--Sobic006G005200 Sobic003G377500--Sobic008G116700 Sobic003G405600 Sobic003G405600 Sobic003G377500--Sobic003G405600 Sobic003G377500--Sobic002G200000 Sobic003G402800 Sobic003G402800 Sobic003G377500--Sobic003G402800 Sobic005G090200 Sobic005G090200 Sobic003G377500--Sobic005G090200 Sobic003G377500--Sobic008G055500 Sobic003G291800 Sobic003G291800 Sobic003G044300--Sobic003G291800 Sobic006G162400 Sobic006G162400 Sobic003G044300--Sobic006G162400 Sobic010G274800 Sobic010G274800 Sobic003G044300--Sobic010G274800 Sobic003G044300--Sobic009G046900 Sobic008G069300 Sobic008G069300 Sobic003G044300--Sobic008G069300 Sobic002G135000 Sobic002G135000 Sobic003G044300--Sobic002G135000 Sobic010G277700 Sobic010G277700 Sobic003G044300--Sobic010G277700 Sobic006G134500 Sobic006G134500 Sobic003G044300--Sobic006G134500 Sobic001G539400 Sobic001G539400 Sobic003G044300--Sobic001G539400 Sobic007G022600--Sobic003G235100 Sobic007G022600--Sobic009G046900 Sobic002G084800 Sobic002G084800 Sobic007G022600--Sobic002G084800 Sobic002G198100 Sobic002G198100 Sobic007G022600--Sobic002G198100 Sobic009G116900 Sobic009G116900 Sobic007G022600--Sobic009G116900 Sobic007G022600--Sobic007G076400 Sobic007G022600--Sobic003G092800 Sobic007G022600--Sobic006G060000 Sobic007G022600--Sobic003G402800 Sobic009G217400 Sobic009G217400 Sobic003G092800--Sobic009G217400 Sobic003G433400 Sobic003G433400 Sobic003G092800--Sobic003G433400 Sobic003G092800--Sobic002G084800 Sobic003G092800--Sobic008G069300 Sobic003G092800--Sobic007G022600 Sobic003G092800--Sobic003G291800 Sobic009G026300 Sobic009G026300 Sobic003G092800--Sobic009G026300 Sobic003G092800--Sobic007G076400 Sobic006G250800 Sobic006G250800 Sobic003G092800--Sobic006G250800 Sobic001G532600 Sobic001G532600 Sobic004G130300--Sobic001G532600 Sobic003G241700 Sobic003G241700 Sobic004G130300--Sobic003G241700 Sobic007G125000 Sobic007G125000 Sobic004G130300--Sobic007G125000 Sobic010G204900 Sobic010G204900 Sobic004G130300--Sobic010G204900 Sobic001G014200 Sobic001G014200 Sobic004G130300--Sobic001G014200 Sobic006G039400 Sobic006G039400 Sobic004G130300--Sobic006G039400 Sobic001G405600 Sobic001G405600 Sobic004G130300--Sobic001G405600 Sobic003G311900 Sobic003G311900 Sobic004G130300--Sobic003G311900 Sobic005G023800 Sobic005G023800 Sobic004G130300--Sobic005G023800 Sobic007G076400--Sobic002G084800 Sobic007G076400--Sobic002G200000 Sobic007G087000 Sobic007G087000 Sobic007G076400--Sobic007G087000 Sobic002G079000 Sobic002G079000 Sobic007G076400--Sobic002G079000 Sobic007G076400--Sobic008G116700 Sobic007G076400--Sobic006G250800 Sobic007G076400--Sobic006G060000 Sobic001G188400 Sobic001G188400 Sobic007G076400--Sobic001G188400 Sobic006G115100 Sobic006G115100 Sobic007G076400--Sobic006G115100
Octagon: transcription factors


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