Gene annotation
Transcriptome id Sobic.009G113400.1
Synonym Sb09g018130, EID1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phytochrome A-associated F-box protein, putative, expressed
UniProt C5YWV9
Pfam -
Panther DB PTHR31348 PTHR31348:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02440 : F-box family protein
RAP-DB (Rice) LOC_Os05g30190.1 : phytochrome A-associated F-box protein, putative, expressed
MaizeGDB (Corn) Zm00025a036986
Brachypodium KQK06678
Barley HORVU1Hr1G058630.1 , HORVU1Hr1G058630.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G109400 acylphosphatase, putative, expressed K01512: acylphosphatase
2 Sobic.009G156100 - -
3 Sobic.006G005200 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
4 Sobic.010G134200 peroxiredoxin, putative, expressed -
5 Sobic.003G421000 - -
6 Sobic.003G242700 - -
7 Sobic.007G157500 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.003G377500 OsFBX10 - F-box domain containing protein, expressed -
9 Sobic.010G034600 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.002G098900 phospholipase D, putative, expressed K01115: phospholipase D1/2
11 Sobic.003G439100 mitochondrial carrier protein, putative, expressed -
12 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
13 Sobic.004G351400 O-methyltransferase, putative, expressed -
14 Sobic.004G130932 - -
15 Sobic.001G078400 OsSigP2 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
16 Sobic.003G260900 methyltransferase, putative, expressed -
17 Sobic.001G532600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
18 Sobic.003G402000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
19 Sobic.003G008900 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
20 Sobic.001G250700 expressed protein -


Gene co-expression network
sample Sobic009G113400 Sobic009G113400 Sobic010G109400 Sobic010G109400 Sobic009G113400--Sobic010G109400 Sobic009G156100 Sobic009G156100 Sobic009G113400--Sobic009G156100 Sobic006G005200 Sobic006G005200 Sobic009G113400--Sobic006G005200 Sobic010G134200 Sobic010G134200 Sobic009G113400--Sobic010G134200 Sobic003G421000 Sobic003G421000 Sobic009G113400--Sobic003G421000 Sobic003G242700 Sobic003G242700 Sobic009G113400--Sobic003G242700 Sobic007G157500 Sobic007G157500 Sobic009G113400--Sobic007G157500 Sobic003G377500 Sobic003G377500 Sobic009G113400--Sobic003G377500 Sobic010G034600 Sobic010G034600 Sobic009G113400--Sobic010G034600 Sobic010G109400--Sobic010G134200 Sobic010G109400--Sobic009G113400 Sobic001G032200 Sobic001G032200 Sobic010G109400--Sobic001G032200 Sobic002G138300 Sobic002G138300 Sobic010G109400--Sobic002G138300 Sobic010G109400--Sobic003G421000 Sobic001G269000 Sobic001G269000 Sobic010G109400--Sobic001G269000 Sobic004G162500 Sobic004G162500 Sobic010G109400--Sobic004G162500 Sobic004G351400 Sobic004G351400 Sobic010G109400--Sobic004G351400 Sobic004G023700 Sobic004G023700 Sobic010G109400--Sobic004G023700 Sobic009G156100--Sobic003G377500 Sobic004G068100 Sobic004G068100 Sobic009G156100--Sobic004G068100 Sobic001G114200 Sobic001G114200 Sobic009G156100--Sobic001G114200 Sobic008G116700 Sobic008G116700 Sobic009G156100--Sobic008G116700 Sobic006G060000 Sobic006G060000 Sobic009G156100--Sobic006G060000 Sobic007G076400 Sobic007G076400 Sobic009G156100--Sobic007G076400 Sobic003G181700 Sobic003G181700 Sobic009G156100--Sobic003G181700 Sobic009G156100--Sobic006G005200 Sobic002G200000 Sobic002G200000 Sobic009G156100--Sobic002G200000 Sobic006G005200--Sobic006G060000 Sobic006G005200--Sobic009G156100 Sobic006G005200--Sobic003G377500 Sobic006G005200--Sobic001G114200 Sobic008G055500 Sobic008G055500 Sobic006G005200--Sobic008G055500 Sobic006G005200--Sobic002G200000 Sobic009G046900 Sobic009G046900 Sobic006G005200--Sobic009G046900 Sobic003G117800 Sobic003G117800 Sobic006G005200--Sobic003G117800 Sobic004G263500 Sobic004G263500 Sobic006G005200--Sobic004G263500 Sobic010G134200--Sobic010G109400 Sobic002G093500 Sobic002G093500 Sobic010G134200--Sobic002G093500 Sobic010G134200--Sobic001G269000 Sobic010G134200--Sobic009G113400 Sobic010G134200--Sobic003G421000 Sobic004G183100 Sobic004G183100 Sobic010G134200--Sobic004G183100 Sobic007G023300 Sobic007G023300 Sobic010G134200--Sobic007G023300 Sobic003G065400 Sobic003G065400 Sobic010G134200--Sobic003G065400 Sobic001G438100 Sobic001G438100 Sobic010G134200--Sobic001G438100 Sobic008G018700 Sobic008G018700 Sobic003G421000--Sobic008G018700 Sobic003G291800 Sobic003G291800 Sobic003G421000--Sobic003G291800 Sobic010G109800 Sobic010G109800 Sobic003G421000--Sobic010G109800 Sobic006G079800 Sobic006G079800 Sobic003G421000--Sobic006G079800 Sobic008G069300 Sobic008G069300 Sobic003G421000--Sobic008G069300 Sobic003G044300 Sobic003G044300 Sobic003G421000--Sobic003G044300 Sobic003G421000--Sobic010G034600 Sobic001G257200 Sobic001G257200 Sobic003G421000--Sobic001G257200 Sobic003G163301 Sobic003G163301 Sobic003G421000--Sobic003G163301 Sobic003G242700--Sobic009G156100 Sobic003G242700--Sobic006G005200 Sobic007G085700 Sobic007G085700 Sobic003G242700--Sobic007G085700 Sobic003G242700--Sobic003G377500 Sobic003G242700--Sobic003G044300 Sobic007G022600 Sobic007G022600 Sobic003G242700--Sobic007G022600 Sobic003G092800 Sobic003G092800 Sobic003G242700--Sobic003G092800 Sobic004G130300 Sobic004G130300 Sobic003G242700--Sobic004G130300 Sobic003G242700--Sobic007G076400 Sobic002G251300 Sobic002G251300 Sobic007G157500--Sobic002G251300 Sobic007G157500--Sobic003G242700 Sobic004G016100 Sobic004G016100 Sobic007G157500--Sobic004G016100 Sobic007G143250 Sobic007G143250 Sobic007G157500--Sobic007G143250 Sobic007G157500--Sobic006G005200 Sobic008G128500 Sobic008G128500 Sobic007G157500--Sobic008G128500 Sobic007G157500--Sobic002G138300 Sobic007G157500--Sobic009G113400 Sobic002G149300 Sobic002G149300 Sobic007G157500--Sobic002G149300 Sobic003G377500--Sobic009G156100 Sobic003G377500--Sobic001G114200 Sobic003G377500--Sobic006G005200 Sobic003G377500--Sobic008G116700 Sobic003G405600 Sobic003G405600 Sobic003G377500--Sobic003G405600 Sobic003G377500--Sobic002G200000 Sobic003G402800 Sobic003G402800 Sobic003G377500--Sobic003G402800 Sobic005G090200 Sobic005G090200 Sobic003G377500--Sobic005G090200 Sobic003G377500--Sobic008G055500 Sobic004G056800 Sobic004G056800 Sobic010G034600--Sobic004G056800 Sobic010G034600--Sobic003G421000 Sobic010G034600--Sobic008G018700 Sobic001G323701 Sobic001G323701 Sobic010G034600--Sobic001G323701 Sobic007G226500 Sobic007G226500 Sobic010G034600--Sobic007G226500 Sobic002G098900 Sobic002G098900 Sobic010G034600--Sobic002G098900 Sobic010G034600--Sobic010G109800 Sobic010G034600--Sobic006G079800 Sobic001G067700 Sobic001G067700 Sobic010G034600--Sobic001G067700
Octagon: transcription factors


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