Gene annotation
| Transcriptome id | Sobic.004G351400.1 |
|---|---|
| Synonym | Sb04g037820 |
| Functional annotation | O-methyltransferase, putative, expressed |
| UniProt | C5XWK7 |
| Pfam | PF00891 |
| Panther DB | PTHR11746 PTHR11746:SF90 |
| NCBI CDD | KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases |
| KEGG Orthology | - |
| Gene Ontology | GO:0008171; O-methyltransferase activity |
Orthologs (automatic annotation)
| TAIR | AT3G53140 : O-methyltransferase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g57760.1 : O-methyltransferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a032747 |
| Brachypodium | KQK01446 |
| Barley | HORVU6Hr1G092840.2 , HORVU6Hr1G092840.1 , HORVU6Hr1G092780.1 , HORVU6Hr1G092780.2 , HORVU6Hr1G092780.3 , HORVU6Hr1G092780.4 , HORVU6Hr1G092780.5 |
| Wheat | TraesCS6A02G405200 , TraesCS6B02G449400 , TraesCS6D02G388700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G022300 | SOUL heme-binding protein, putative, expressed | - |
| 2 | Sobic.003G008900 | erythronate-4-phosphate dehydrogenase domain containing protein, expressed | K15919: glyoxylate/hydroxypyruvate reductase |
| 3 | Sobic.002G227700 | gibberellin receptor GID1L2, putative, expressed | - |
| 4 | Sobic.004G227200 | ferredoxin-thioredoxin reductase, variable chain, putative, expressed | - |
| 5 | Sobic.007G178500 | cytochrome P450, putative, expressed | - |
| 6 | Sobic.001G023700 | expressed protein | - |
| 7 | Sobic.010G011800 | OsFBO18 - F-box and other domain containing protein, expressed | - |
| 8 | Sobic.001G221300 | alcohol oxidase, putative, expressed | K17756: long-chain-alcohol oxidase |
| 9 | Sobic.001G417200 | ATP synthase B chain, chloroplast precursor, putative, expressed | K02109: ATPF0B, F-type H+-transporting ATPase subunit b |
| 10 | Sobic.008G019100 | - | - |
| 11 | Sobic.001G035800 | heavy metal-associated domain containing protein, expressed | - |
| 12 | Sobic.001G498300 | galactose mutarotase-like, putative, expressed | - |
| 13 | Sobic.003G150600 | pectinacetylesterase domain containing protein, expressed | - |
| 14 | Sobic.001G198800 | -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed | - |
| 15 | Sobic.002G065200 | pentatricopeptide, putative, expressed | - |
| 16 | Sobic.001G177000 | Chorophyll a/b binding protein(PubMedID : 26186930)@Chorophyll a/b binding protein(PubMedID : 26186930)@Light harvesting complex-II subunit B2(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed | K08913: light-harvesting complex II chlorophyll a/b binding protein 2 |
| 17 | Sobic.005G231600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"ADP/ ATP binding enzyme, RuBisCO activator (Os)"(PubMedID : 27208977)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@sulfotransferase(PubMedID : 28396420)@AAA-type ATPase family protein, putative, expressed | - |
| 18 | Sobic.004G343100 | YCF37, putative, expressed | - |
| 19 | Sobic.003G187000 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 20 | Sobic.005G192600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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