Gene annotation
| Transcriptome id | Sobic.001G198800.1 |
|---|---|
| Synonym | Sb01g017520 |
| Functional annotation | - (PubMedID : 26465154) invertase/pectin methylesterase inhibitor family protein, putative, expressed |
| UniProt | C5WWB1 |
| Pfam | PF04043 |
| Panther DB | PTHR31080 PTHR31080:SF13 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0004857; enzyme inhibitor activity |
Orthologs (automatic annotation)
| TAIR | AT2G01610 : Plant invertase/pectin methylesterase inhibitor superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os10g36500.2 : invertase/pectin methylesterase inhibitor family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a006368 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G182700 | OsFBK8 - F-box domain and kelch repeat containing protein, expressed | - |
| 2 | Sobic.003G310400 | polyphenol oxidase, putative, expressed | K00422: polyphenol oxidase |
| 3 | Sobic.008G036300 | Ser/Thr protein phosphatase family protein, putative, expressed | - |
| 4 | Sobic.001G338700 | tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed | - |
| 5 | Sobic.002G033800 | expressed protein | - |
| 6 | Sobic.003G131000 | expressed protein | - |
| 7 | Sobic.006G234100 | shikimate/quinate 5-dehydrogenase, putative, expressed | K02492: glutamyl-tRNA reductase |
| 8 | Sobic.001G448400 | UbiE/COQ5 methyltransferase family protein (Sb)(PubMedID : 27208977)@methyltransferase domain containing protein, putative, expressed | - |
| 9 | Sobic.008G080400 | "cyanogenic beta-glucosidase dhurrinase, up-regulated under drought stress "(PubMedID : 24655390)@Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed | K01188: beta-glucosidase |
| 10 | Sobic.005G167500 | resistance protein, putative, expressed | - |
| 11 | Sobic.010G109500 | expressed protein | - |
| 12 | Sobic.007G071500 | photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed | K03541: photosystem II 10kDa protein |
| 13 | Sobic.007G212400 | thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed | - |
| 14 | Sobic.009G132900 | PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed | K01006: pyruvate, orthophosphate dikinase |
| 15 | Sobic.003G057900 | ribosomal protein L5, putative, expressed | - |
| 16 | Sobic.004G343300 | -(PubMedID : 26465154)@unknown(PubMedID : 29017446)@expressed protein | - |
| 17 | Sobic.010G006350 | - | - |
| 18 | Sobic.003G052500 | Photosystem I reaction center subunit XI(PubMedID : 26186930)@Photosystem I subunit L(PubMedID : 29017446)@photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed | K02699: photosystem I subunit XI |
| 19 | Sobic.005G192600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed | - |
| 20 | Sobic.004G023200 | Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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