Gene annotation
| Transcriptome id | Sobic.009G132900.1,Sobic.009G132900.2,Sobic.009G132900.3 |
|---|---|
| Synonym | PPDK;PPDK, Sb09g019930, PPDK |
| Functional annotation | PPDK (PubMedID : 19549309) pyruvate orthophosphate dikinase (PubMedID : 26465154) pyruvate orthophosphate dikinase (PubMedID : 26465154) phyruvate phosphate dikinase (PubMedID : 26904072) - (PubMedID : 26976818) pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed |
| UniProt | A0A1B6P8M2 , A0A1B6P8T6 , A0A1B6P872 , Q84N32 |
| Pfam | PF02896 PF01326 PF00391 PF00391 PF01326 PF02896 |
| Panther DB | PTHR22931 PTHR22931:SF9 PTHR22931:SF9 PTHR22931 |
| NCBI CDD | - |
| KEGG Orthology | K01006; pyruvate, orthophosphate dikinase |
| Gene Ontology | GO:0006090; pyruvate metabolic process GO:0005524ATP binding GO:0016301kinase activity GO:0016310phosphorylation GO:0016772transferase activity, transferring phosphorus-containing groups GO:0016772transferase activity, transferring phosphorus-containing groups GO:0016310phosphorylation GO:0016301kinase activity GO:0005524ATP binding GO:0006090pyruvate metabolic process |
Orthologs (automatic annotation)
| TAIR | AT4G15530 : pyruvate orthophosphate dikinase |
|---|---|
| RAP-DB (Rice) | LOC_Os05g33570.1,LOC_Os05g33570.2 : pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a043657 , Zm00025a037486 |
| Brachypodium | PNT71289 , KQK06326 , KQK06324 |
| Barley | HORVU1Hr1G061160.1 , HORVU1Hr1G061160.3 , HORVU1Hr1G061160.2 , HORVU1Hr1G061160.5 , HORVU1Hr1G061160.4 , HORVU1Hr1G061160.7 , HORVU1Hr1G061160.6 , HORVU1Hr1G061160.9 , HORVU1Hr1G061160.8 , HORVU1Hr1G061160.15 , HORVU1Hr1G061160.14 , HORVU1Hr1G061160.17 , HORVU1Hr1G061160.16 , HORVU1Hr1G061160.11 , HORVU1Hr1G061160.10 , HORVU1Hr1G061160.13 , HORVU1Hr1G061160.12 , HORVU1Hr1G061160.19 , HORVU1Hr1G061160.18 |
| Wheat | TraesCS1B02G264900 , TraesCS1B02G264900 , TraesCS1B02G264900 , TraesCS1D02G252900 , TraesCS1D02G252900 , TraesCS1A02G253400 , TraesCS1A02G253400 , TraesCS1A02G253400 , TraesCS1A02G253200 , TraesCS1A02G253200 |
| Populus | - |
JBrowse
| Sobic.009G132900 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.010G109500 | expressed protein | - |
| 2 | Sobic.006G234100 | shikimate/quinate 5-dehydrogenase, putative, expressed | K02492: glutamyl-tRNA reductase |
| 3 | Sobic.002G000500 | isoflavone reductase, putative, expressed | - |
| 4 | Sobic.001G448400 | UbiE/COQ5 methyltransferase family protein (Sb)(PubMedID : 27208977)@methyltransferase domain containing protein, putative, expressed | - |
| 5 | Sobic.006G011100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 6 | Sobic.002G394100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 7 | Sobic.003G057900 | ribosomal protein L5, putative, expressed | - |
| 8 | Sobic.002G339200 | Chorophyll a/b binding protein(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Light harvesting complex-II subunit B3(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed | K08914: light-harvesting complex II chlorophyll a/b binding protein 3 |
| 9 | Sobic.006G136500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed | - |
| 10 | Sobic.010G276400 | "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed | K02291: 15-cis-phytoene synthase |
| 11 | Sobic.001G198800 | -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed | - |
| 12 | Sobic.002G040100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- | - |
| 13 | Sobic.003G131000 | expressed protein | - |
| 14 | Sobic.007G212400 | thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed | - |
| 15 | Sobic.008G036300 | Ser/Thr protein phosphatase family protein, putative, expressed | - |
| 16 | Sobic.001G338700 | tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed | - |
| 17 | Sobic.010G094301 | - | - |
| 18 | Sobic.007G171600 | Ser/Thr protein phosphatase family protein, putative, expressed | K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase |
| 19 | Sobic.010G241000 | oxygen-evolving enhancer protein 1, chloroplast precursor, putative, expressed | K02716: photosystem II oxygen-evolving enhancer protein 1 |
| 20 | Sobic.003G052500 | Photosystem I reaction center subunit XI(PubMedID : 26186930)@Photosystem I subunit L(PubMedID : 29017446)@photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed | K02699: photosystem I subunit XI |
Gene co-expression network
Octagon: transcription factors
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