Gene annotation
Transcriptome id Sobic.006G136500.1
Synonym CYP71A22, Sb06g021610
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5YBI7
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF183
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G48310 : cytochrome P450, family 71, subfamily A, polypeptide 22
RAP-DB (Rice) LOC_Os11g27730.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a010792 , Zm00025a010798 , Zm00025a002485 , Zm00025a010796
Brachypodium KQK16460 , KQK16461 , KQK16458 , KQK16459
Barley HORVU2Hr1G006850.4 , HORVU2Hr1G006850.1 , HORVU2Hr1G006850.3 , HORVU2Hr1G006850.2 , HORVU1Hr1G007840.2 , HORVU1Hr1G007840.3 , HORVU1Hr1G007840.1 , HORVU2Hr1G006910.18 , HORVU2Hr1G006910.12 , HORVU2Hr1G006910.13 , HORVU2Hr1G006910.10 , HORVU2Hr1G006910.11 , HORVU2Hr1G006910.16 , HORVU2Hr1G006910.17 , HORVU2Hr1G006910.14 , HORVU2Hr1G006910.4 , HORVU2Hr1G006910.7 , HORVU2Hr1G006910.9
Wheat TraesCS2B02G058000 , TraesCS2B02G058000 , TraesCS2D02G044700 , TraesCS2A02G045600 , TraesCS2A02G046000 , TraesCS2A02G045900 , TraesCS5B02G007100 , TraesCS2B02G057800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G364100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
2 Sobic.006G234100 shikimate/quinate 5-dehydrogenase, putative, expressed K02492: glutamyl-tRNA reductase
3 Sobic.010G109500 expressed protein -
4 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
5 Sobic.009G132900 PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
6 Sobic.009G191300 photosystem II reaction center W protein, chloroplast precursor, putative, expressed K02721: photosystem II PsbW protein
7 Sobic.003G057900 ribosomal protein L5, putative, expressed -
8 Sobic.002G339200 Chorophyll a/b binding protein(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Light harvesting complex-II subunit B3(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08914: light-harvesting complex II chlorophyll a/b binding protein 3
9 Sobic.002G000500 isoflavone reductase, putative, expressed -
10 Sobic.007G212400 thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed -
11 Sobic.006G011100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G078000 Cytochrome b6f subunit VII(PubMedID : 29017446)@cytochrome b6f complex subunit, putative, expressed -
13 Sobic.001G448400 UbiE/COQ5 methyltransferase family protein (Sb)(PubMedID : 27208977)@methyltransferase domain containing protein, putative, expressed -
14 Sobic.008G038300 uncharacterized protein ycf53, putative, expressed -
15 Sobic.009G243500 polygalacturonase, putative, expressed -
16 Sobic.010G241000 oxygen-evolving enhancer protein 1, chloroplast precursor, putative, expressed K02716: photosystem II oxygen-evolving enhancer protein 1
17 Sobic.002G264800 unknown(PubMedID : 29017446)@expressed protein -
18 Sobic.003G052500 Photosystem I reaction center subunit XI(PubMedID : 26186930)@Photosystem I subunit L(PubMedID : 29017446)@photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed K02699: photosystem I subunit XI
19 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
20 Sobic.003G209800 Chorophyll a/b binding protein 2(PubMedID : 26186930)@Protein chlorophyll a-b binding protein 2 (Os)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1


Gene co-expression network
sample Sobic006G136500 Sobic006G136500 Sobic001G364100 Sobic001G364100 Sobic006G136500--Sobic001G364100 Sobic006G234100 Sobic006G234100 Sobic006G136500--Sobic006G234100 Sobic010G109500 Sobic010G109500 Sobic006G136500--Sobic010G109500 Sobic002G040100 Sobic002G040100 Sobic006G136500--Sobic002G040100 Sobic009G132900 Sobic009G132900 Sobic006G136500--Sobic009G132900 Sobic009G191300 Sobic009G191300 Sobic006G136500--Sobic009G191300 Sobic003G057900 Sobic003G057900 Sobic006G136500--Sobic003G057900 Sobic002G339200 Sobic002G339200 Sobic006G136500--Sobic002G339200 Sobic002G000500 Sobic002G000500 Sobic006G136500--Sobic002G000500 Sobic001G364100--Sobic006G234100 Sobic001G364100--Sobic002G339200 Sobic010G241000 Sobic010G241000 Sobic001G364100--Sobic010G241000 Sobic001G364100--Sobic010G109500 Sobic002G264800 Sobic002G264800 Sobic001G364100--Sobic002G264800 Sobic001G364100--Sobic006G136500 Sobic001G078000 Sobic001G078000 Sobic001G364100--Sobic001G078000 Sobic009G234600 Sobic009G234600 Sobic001G364100--Sobic009G234600 Sobic002G329600 Sobic002G329600 Sobic001G364100--Sobic002G329600 Sobic006G234100--Sobic010G109500 Sobic001G448400 Sobic001G448400 Sobic006G234100--Sobic001G448400 Sobic006G234100--Sobic002G339200 Sobic004G343300 Sobic004G343300 Sobic006G234100--Sobic004G343300 Sobic006G234100--Sobic010G241000 Sobic003G052500 Sobic003G052500 Sobic006G234100--Sobic003G052500 Sobic006G234100--Sobic002G329600 Sobic006G234100--Sobic001G078000 Sobic006G264201 Sobic006G264201 Sobic006G234100--Sobic006G264201 Sobic010G109500--Sobic006G234100 Sobic010G109500--Sobic001G448400 Sobic006G011100 Sobic006G011100 Sobic010G109500--Sobic006G011100 Sobic003G209800 Sobic003G209800 Sobic010G109500--Sobic003G209800 Sobic010G276400 Sobic010G276400 Sobic010G109500--Sobic010G276400 Sobic010G109500--Sobic002G339200 Sobic010G109500--Sobic002G000500 Sobic010G109500--Sobic003G052500 Sobic010G109500--Sobic004G343300 Sobic002G040100--Sobic002G000500 Sobic008G038300 Sobic008G038300 Sobic002G040100--Sobic008G038300 Sobic003G199800 Sobic003G199800 Sobic002G040100--Sobic003G199800 Sobic002G040100--Sobic010G276400 Sobic001G068400 Sobic001G068400 Sobic002G040100--Sobic001G068400 Sobic002G040100--Sobic010G109500 Sobic010G038500 Sobic010G038500 Sobic002G040100--Sobic010G038500 Sobic010G183032 Sobic010G183032 Sobic002G040100--Sobic010G183032 Sobic002G040100--Sobic003G209800 Sobic009G132900--Sobic010G109500 Sobic009G132900--Sobic006G234100 Sobic009G132900--Sobic002G000500 Sobic009G132900--Sobic001G448400 Sobic009G132900--Sobic006G011100 Sobic002G394100 Sobic002G394100 Sobic009G132900--Sobic002G394100 Sobic009G132900--Sobic003G057900 Sobic009G132900--Sobic002G339200 Sobic009G132900--Sobic006G136500 Sobic009G191300--Sobic008G038300 Sobic009G191300--Sobic003G209800 Sobic009G191300--Sobic002G040100 Sobic009G191300--Sobic003G052500 Sobic004G035500 Sobic004G035500 Sobic009G191300--Sobic004G035500 Sobic003G359100 Sobic003G359100 Sobic009G191300--Sobic003G359100 Sobic009G191300--Sobic003G199800 Sobic009G191300--Sobic010G109500 Sobic001G338700 Sobic001G338700 Sobic009G191300--Sobic001G338700 Sobic001G192100 Sobic001G192100 Sobic003G057900--Sobic001G192100 Sobic010G006350 Sobic010G006350 Sobic003G057900--Sobic010G006350 Sobic003G057900--Sobic009G132900 Sobic003G131000 Sobic003G131000 Sobic003G057900--Sobic003G131000 Sobic008G080400 Sobic008G080400 Sobic003G057900--Sobic008G080400 Sobic010G094301 Sobic010G094301 Sobic003G057900--Sobic010G094301 Sobic003G057900--Sobic006G136500 Sobic001G198800 Sobic001G198800 Sobic003G057900--Sobic001G198800 Sobic003G057900--Sobic006G234100 Sobic002G339200--Sobic002G329600 Sobic002G339200--Sobic006G264201 Sobic002G339200--Sobic001G078000 Sobic002G339200--Sobic006G234100 Sobic002G339200--Sobic009G234600 Sobic002G339200--Sobic010G241000 Sobic002G339200--Sobic001G448400 Sobic002G339200--Sobic010G109500 Sobic007G029300 Sobic007G029300 Sobic002G339200--Sobic007G029300 Sobic002G000500--Sobic002G040100 Sobic002G000500--Sobic006G011100 Sobic002G000500--Sobic010G109500 Sobic002G000500--Sobic010G276400 Sobic002G000500--Sobic003G199800 Sobic002G000500--Sobic008G038300 Sobic007G171600 Sobic007G171600 Sobic002G000500--Sobic007G171600 Sobic002G000500--Sobic003G209800 Sobic001G274600 Sobic001G274600 Sobic002G000500--Sobic001G274600
Octagon: transcription factors


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