Gene annotation
Transcriptome id Sobic.002G264800.1
Synonym Sb02g029940
Functional annotation unknown (PubMedID : 29017446)
expressed protein
UniProt C5X5F2
Pfam -
Panther DB PTHR37182
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G21500 : -
RAP-DB (Rice) LOC_Os09g34140.1 : expressed protein
MaizeGDB (Corn) Zm00025a047675
Brachypodium KQJ91060
Barley HORVU5Hr1G079600.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G212400 thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed -
2 Sobic.001G364100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
3 Sobic.001G382100 Photosystem II repair protein PSB27-H1(PubMedID : 26186930)@Photosystem II 11 kD protein (Os)(PubMedID : 27208977)@photosystem II 11 kD protein, putative, expressed K08902: photosystem II Psb27 protein
4 Sobic.001G448400 UbiE/COQ5 methyltransferase family protein (Sb)(PubMedID : 27208977)@methyltransferase domain containing protein, putative, expressed -
5 Sobic.009G091850 - -
6 Sobic.002G339200 Chorophyll a/b binding protein(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Light harvesting complex-II subunit B3(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08914: light-harvesting complex II chlorophyll a/b binding protein 3
7 Sobic.003G099400 cyclophilin-type(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
8 Sobic.002G329600 Oxygen-evolving enhancer protein 3-1(PubMedID : 26186930)@Ferredoxin-NADP reductase-binding protein (Zm)(PubMedID : 27208977)@-(PubMedID : 29017446)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
9 Sobic.006G234100 shikimate/quinate 5-dehydrogenase, putative, expressed K02492: glutamyl-tRNA reductase
10 Sobic.009G130700 lumen 18.3kDa protein(PubMedID : 29017446)@thylakoid lumen protein, putative, expressed -
11 Sobic.003G239300 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.006G264201 - K08917: light-harvesting complex II chlorophyll a/b binding protein 6
13 Sobic.004G238500 Geranylgeranyl reductase (Os)(PubMedID : 27208977)@FAD binding domain containing protein, expressed K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase
14 Sobic.007G116950 - -
15 Sobic.010G109500 expressed protein -
16 Sobic.007G029300 acyl-activating enzyme 14, putative, expressed K14760: acyl-activating enzyme 14
17 Sobic.006G136500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.002G297300 expressed protein -
19 Sobic.003G433900 expressed protein -
20 Sobic.001G078000 Cytochrome b6f subunit VII(PubMedID : 29017446)@cytochrome b6f complex subunit, putative, expressed -


Gene co-expression network
sample Sobic002G264800 Sobic002G264800 Sobic007G212400 Sobic007G212400 Sobic002G264800--Sobic007G212400 Sobic001G364100 Sobic001G364100 Sobic002G264800--Sobic001G364100 Sobic001G382100 Sobic001G382100 Sobic002G264800--Sobic001G382100 Sobic001G448400 Sobic001G448400 Sobic002G264800--Sobic001G448400 Sobic009G091850 Sobic009G091850 Sobic002G264800--Sobic009G091850 Sobic002G339200 Sobic002G339200 Sobic002G264800--Sobic002G339200 Sobic003G099400 Sobic003G099400 Sobic002G264800--Sobic003G099400 Sobic002G329600 Sobic002G329600 Sobic002G264800--Sobic002G329600 Sobic006G234100 Sobic006G234100 Sobic002G264800--Sobic006G234100 Sobic007G212400--Sobic001G448400 Sobic007G212400--Sobic002G329600 Sobic004G238500 Sobic004G238500 Sobic007G212400--Sobic004G238500 Sobic006G264201 Sobic006G264201 Sobic007G212400--Sobic006G264201 Sobic007G212400--Sobic002G264800 Sobic007G029300 Sobic007G029300 Sobic007G212400--Sobic007G029300 Sobic007G212400--Sobic006G234100 Sobic001G078000 Sobic001G078000 Sobic007G212400--Sobic001G078000 Sobic007G212400--Sobic002G339200 Sobic001G364100--Sobic006G234100 Sobic001G364100--Sobic002G339200 Sobic010G241000 Sobic010G241000 Sobic001G364100--Sobic010G241000 Sobic010G109500 Sobic010G109500 Sobic001G364100--Sobic010G109500 Sobic001G364100--Sobic002G264800 Sobic006G136500 Sobic006G136500 Sobic001G364100--Sobic006G136500 Sobic001G364100--Sobic001G078000 Sobic009G234600 Sobic009G234600 Sobic001G364100--Sobic009G234600 Sobic001G364100--Sobic002G329600 Sobic010G255600 Sobic010G255600 Sobic001G382100--Sobic010G255600 Sobic001G382100--Sobic003G099400 Sobic001G382100--Sobic004G238500 Sobic008G051000 Sobic008G051000 Sobic001G382100--Sobic008G051000 Sobic001G203000 Sobic001G203000 Sobic001G382100--Sobic001G203000 Sobic001G382100--Sobic009G091850 Sobic007G116950 Sobic007G116950 Sobic001G382100--Sobic007G116950 Sobic004G114800 Sobic004G114800 Sobic001G382100--Sobic004G114800 Sobic006G100900 Sobic006G100900 Sobic001G382100--Sobic006G100900 Sobic001G448400--Sobic006G234100 Sobic001G448400--Sobic002G339200 Sobic004G343300 Sobic004G343300 Sobic001G448400--Sobic004G343300 Sobic001G448400--Sobic002G329600 Sobic001G448400--Sobic010G109500 Sobic001G448400--Sobic006G264201 Sobic001G448400--Sobic007G029300 Sobic001G448400--Sobic010G241000 Sobic001G448400--Sobic001G078000 Sobic009G091850--Sobic007G116950 Sobic001G527000 Sobic001G527000 Sobic009G091850--Sobic001G527000 Sobic009G091850--Sobic008G051000 Sobic009G091850--Sobic010G255600 Sobic003G132100 Sobic003G132100 Sobic009G091850--Sobic003G132100 Sobic003G433900 Sobic003G433900 Sobic009G091850--Sobic003G433900 Sobic009G091850--Sobic001G382100 Sobic007G004600 Sobic007G004600 Sobic009G091850--Sobic007G004600 Sobic009G091800 Sobic009G091800 Sobic009G091850--Sobic009G091800 Sobic002G339200--Sobic002G329600 Sobic002G339200--Sobic006G264201 Sobic002G339200--Sobic001G078000 Sobic002G339200--Sobic006G234100 Sobic002G339200--Sobic009G234600 Sobic002G339200--Sobic010G241000 Sobic002G339200--Sobic001G448400 Sobic002G339200--Sobic010G109500 Sobic002G339200--Sobic007G029300 Sobic003G099400--Sobic001G382100 Sobic003G099400--Sobic007G116950 Sobic003G099400--Sobic004G238500 Sobic003G099400--Sobic008G051000 Sobic003G099400--Sobic007G029300 Sobic003G099400--Sobic010G255600 Sobic003G099400--Sobic009G091850 Sobic003G099400--Sobic006G264201 Sobic003G099400--Sobic001G203000 Sobic002G329600--Sobic006G264201 Sobic002G329600--Sobic002G339200 Sobic002G329600--Sobic001G078000 Sobic002G329600--Sobic010G241000 Sobic002G329600--Sobic009G234600 Sobic002G329600--Sobic007G029300 Sobic002G297300 Sobic002G297300 Sobic002G329600--Sobic002G297300 Sobic002G030200 Sobic002G030200 Sobic002G329600--Sobic002G030200 Sobic002G329600--Sobic001G448400 Sobic006G234100--Sobic010G109500 Sobic006G234100--Sobic001G448400 Sobic006G234100--Sobic002G339200 Sobic006G234100--Sobic004G343300 Sobic006G234100--Sobic010G241000 Sobic003G052500 Sobic003G052500 Sobic006G234100--Sobic003G052500 Sobic006G234100--Sobic002G329600 Sobic006G234100--Sobic001G078000 Sobic006G234100--Sobic006G264201
Octagon: transcription factors


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