Gene annotation
Transcriptome id Sobic.003G239300.1
Synonym Sb03g029650
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XF79
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF273
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G31550 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g42730.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a028235 , Zm00025a028241 , Zm00025a028242
Brachypodium KQK08983 , PNT72503
Barley HORVU3Hr1G058610.5 , HORVU3Hr1G058610.4 , HORVU3Hr1G058610.7 , HORVU3Hr1G058610.6 , HORVU3Hr1G058610.1 , HORVU3Hr1G058610.2 , HORVU3Hr1G058610.9 , HORVU3Hr1G058610.8 , HORVU3Hr1G058610.10
Wheat TraesCS3B02G264400 , TraesCS3B02G264400 , TraesCS7A02G500500 , TraesCS3A02G235500 , TraesCS3D02G235600 , TraesCS7D02G487000 , TraesCS7A02G500600 , TraesCS7D02G487300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G212400 thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed -
2 Sobic.002G383400 Protein oxidoreductase (Os)(PubMedID : 27208977)@amine oxidase family protein, putative, expressed -
3 Sobic.009G130700 lumen 18.3kDa protein(PubMedID : 29017446)@thylakoid lumen protein, putative, expressed -
4 Sobic.009G179800 - -
5 Sobic.001G382100 Photosystem II repair protein PSB27-H1(PubMedID : 26186930)@Photosystem II 11 kD protein (Os)(PubMedID : 27208977)@photosystem II 11 kD protein, putative, expressed K08902: photosystem II Psb27 protein
6 Sobic.003G099400 cyclophilin-type(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
7 Sobic.002G264800 unknown(PubMedID : 29017446)@expressed protein -
8 Sobic.002G297300 expressed protein -
9 Sobic.002G329600 Oxygen-evolving enhancer protein 3-1(PubMedID : 26186930)@Ferredoxin-NADP reductase-binding protein (Zm)(PubMedID : 27208977)@-(PubMedID : 29017446)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
10 Sobic.007G029300 acyl-activating enzyme 14, putative, expressed K14760: acyl-activating enzyme 14
11 Sobic.004G238500 Geranylgeranyl reductase (Os)(PubMedID : 27208977)@FAD binding domain containing protein, expressed K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase
12 Sobic.001G078000 Cytochrome b6f subunit VII(PubMedID : 29017446)@cytochrome b6f complex subunit, putative, expressed -
13 Sobic.002G119500 Photosystem I reaction center subunit IV(PubMedID : 26186930)@photosystem I reaction center subunit IV A, chloroplast precursor, putative, expressed K02693: photosystem I subunit IV
14 Sobic.006G264201 - K08917: light-harvesting complex II chlorophyll a/b binding protein 6
15 Sobic.001G448400 UbiE/COQ5 methyltransferase family protein (Sb)(PubMedID : 27208977)@methyltransferase domain containing protein, putative, expressed -
16 Sobic.002G339200 Chorophyll a/b binding protein(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Light harvesting complex-II subunit B3(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08914: light-harvesting complex II chlorophyll a/b binding protein 3
17 Sobic.003G393800 30S ribosomal protein S31, chloroplast precursor, putative, expressed K19033: PSRP4, 30S ribosomal protein S31
18 Sobic.009G091850 - -
19 Sobic.007G116950 - -
20 Sobic.005G128100 acyl carrier protein, putative, expressed -


Gene co-expression network
sample Sobic003G239300 Sobic003G239300 Sobic007G212400 Sobic007G212400 Sobic003G239300--Sobic007G212400 Sobic002G383400 Sobic002G383400 Sobic003G239300--Sobic002G383400 Sobic009G130700 Sobic009G130700 Sobic003G239300--Sobic009G130700 Sobic009G179800 Sobic009G179800 Sobic003G239300--Sobic009G179800 Sobic001G382100 Sobic001G382100 Sobic003G239300--Sobic001G382100 Sobic003G099400 Sobic003G099400 Sobic003G239300--Sobic003G099400 Sobic002G264800 Sobic002G264800 Sobic003G239300--Sobic002G264800 Sobic002G297300 Sobic002G297300 Sobic003G239300--Sobic002G297300 Sobic002G329600 Sobic002G329600 Sobic003G239300--Sobic002G329600 Sobic001G448400 Sobic001G448400 Sobic007G212400--Sobic001G448400 Sobic007G212400--Sobic002G329600 Sobic004G238500 Sobic004G238500 Sobic007G212400--Sobic004G238500 Sobic006G264201 Sobic006G264201 Sobic007G212400--Sobic006G264201 Sobic007G212400--Sobic002G264800 Sobic007G029300 Sobic007G029300 Sobic007G212400--Sobic007G029300 Sobic006G234100 Sobic006G234100 Sobic007G212400--Sobic006G234100 Sobic001G078000 Sobic001G078000 Sobic007G212400--Sobic001G078000 Sobic002G339200 Sobic002G339200 Sobic007G212400--Sobic002G339200 Sobic002G383400--Sobic002G297300 Sobic002G383400--Sobic003G239300 Sobic002G383400--Sobic009G130700 Sobic001G206200 Sobic001G206200 Sobic002G383400--Sobic001G206200 Sobic004G193400 Sobic004G193400 Sobic002G383400--Sobic004G193400 Sobic002G414400 Sobic002G414400 Sobic002G383400--Sobic002G414400 Sobic002G383400--Sobic009G179800 Sobic002G383400--Sobic004G238500 Sobic002G383400--Sobic002G329600 Sobic009G130700--Sobic002G297300 Sobic009G130700--Sobic009G179800 Sobic003G433900 Sobic003G433900 Sobic009G130700--Sobic003G433900 Sobic009G091800 Sobic009G091800 Sobic009G130700--Sobic009G091800 Sobic003G246400 Sobic003G246400 Sobic009G130700--Sobic003G246400 Sobic009G130700--Sobic001G382100 Sobic009G130700--Sobic004G238500 Sobic010G022100 Sobic010G022100 Sobic009G130700--Sobic010G022100 Sobic009G130700--Sobic002G329600 Sobic009G179800--Sobic009G130700 Sobic003G393800 Sobic003G393800 Sobic009G179800--Sobic003G393800 Sobic009G179800--Sobic003G246400 Sobic003G246600 Sobic003G246600 Sobic009G179800--Sobic003G246600 Sobic010G072900 Sobic010G072900 Sobic009G179800--Sobic010G072900 Sobic001G411300 Sobic001G411300 Sobic009G179800--Sobic001G411300 Sobic009G179800--Sobic001G382100 Sobic005G128100 Sobic005G128100 Sobic009G179800--Sobic005G128100 Sobic009G179800--Sobic003G239300 Sobic010G255600 Sobic010G255600 Sobic001G382100--Sobic010G255600 Sobic001G382100--Sobic003G099400 Sobic001G382100--Sobic004G238500 Sobic008G051000 Sobic008G051000 Sobic001G382100--Sobic008G051000 Sobic001G203000 Sobic001G203000 Sobic001G382100--Sobic001G203000 Sobic009G091850 Sobic009G091850 Sobic001G382100--Sobic009G091850 Sobic007G116950 Sobic007G116950 Sobic001G382100--Sobic007G116950 Sobic004G114800 Sobic004G114800 Sobic001G382100--Sobic004G114800 Sobic006G100900 Sobic006G100900 Sobic001G382100--Sobic006G100900 Sobic003G099400--Sobic001G382100 Sobic003G099400--Sobic007G116950 Sobic003G099400--Sobic004G238500 Sobic003G099400--Sobic008G051000 Sobic003G099400--Sobic007G029300 Sobic003G099400--Sobic010G255600 Sobic003G099400--Sobic009G091850 Sobic003G099400--Sobic006G264201 Sobic003G099400--Sobic001G203000 Sobic002G264800--Sobic007G212400 Sobic001G364100 Sobic001G364100 Sobic002G264800--Sobic001G364100 Sobic002G264800--Sobic001G382100 Sobic002G264800--Sobic001G448400 Sobic002G264800--Sobic009G091850 Sobic002G264800--Sobic002G339200 Sobic002G264800--Sobic003G099400 Sobic002G264800--Sobic002G329600 Sobic002G264800--Sobic006G234100 Sobic002G297300--Sobic009G091800 Sobic002G297300--Sobic002G329600 Sobic004G234200 Sobic004G234200 Sobic002G297300--Sobic004G234200 Sobic002G297300--Sobic009G130700 Sobic002G030200 Sobic002G030200 Sobic002G297300--Sobic002G030200 Sobic002G297300--Sobic006G264201 Sobic002G297300--Sobic004G238500 Sobic010G000500 Sobic010G000500 Sobic002G297300--Sobic010G000500 Sobic002G297300--Sobic008G051000 Sobic002G329600--Sobic006G264201 Sobic002G329600--Sobic002G339200 Sobic002G329600--Sobic001G078000 Sobic010G241000 Sobic010G241000 Sobic002G329600--Sobic010G241000 Sobic009G234600 Sobic009G234600 Sobic002G329600--Sobic009G234600 Sobic002G329600--Sobic007G029300 Sobic002G329600--Sobic002G297300 Sobic002G329600--Sobic002G030200 Sobic002G329600--Sobic001G448400
Octagon: transcription factors


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