Gene annotation
Transcriptome id Sobic.007G029300.1
Synonym Sb07g002550, AAE14
Functional annotation acyl-activating enzyme 14, putative, expressed
UniProt C5YMX5
Pfam PF13193 PF00501
Panther DB PTHR24095 PTHR24095:SF181
NCBI CDD KOG1177; Long chain fatty acid acyl-CoA ligase
KEGG Orthology K14760; acyl-activating enzyme 14
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G30520 : acyl-activating enzyme 14
RAP-DB (Rice) LOC_Os08g03630.1 : acyl-activating enzyme 14, putative, expressed
MaizeGDB (Corn) Zm00025a040395
Brachypodium KQJ94955 , KQJ94957 , KQJ94956 , PNT66589
Barley -
Wheat TraesCS7B02G210000 , TraesCS7A02G310100 , TraesCS7A02G310100 , TraesCS7B02G210000 , TraesCS7B02G210000 , TraesCS7D02G306700 , TraesCS7D02G306700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G329600 Oxygen-evolving enhancer protein 3-1(PubMedID : 26186930)@Ferredoxin-NADP reductase-binding protein (Zm)(PubMedID : 27208977)@-(PubMedID : 29017446)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
2 Sobic.006G264201 - K08917: light-harvesting complex II chlorophyll a/b binding protein 6
3 Sobic.002G339200 Chorophyll a/b binding protein(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Light harvesting complex-II subunit B3(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08914: light-harvesting complex II chlorophyll a/b binding protein 3
4 Sobic.001G448400 UbiE/COQ5 methyltransferase family protein (Sb)(PubMedID : 27208977)@methyltransferase domain containing protein, putative, expressed -
5 Sobic.001G078000 Cytochrome b6f subunit VII(PubMedID : 29017446)@cytochrome b6f complex subunit, putative, expressed -
6 Sobic.004G238500 Geranylgeranyl reductase (Os)(PubMedID : 27208977)@FAD binding domain containing protein, expressed K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase
7 Sobic.006G234100 shikimate/quinate 5-dehydrogenase, putative, expressed K02492: glutamyl-tRNA reductase
8 Sobic.010G241000 oxygen-evolving enhancer protein 1, chloroplast precursor, putative, expressed K02716: photosystem II oxygen-evolving enhancer protein 1
9 Sobic.003G099400 cyclophilin-type(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
10 Sobic.004G343300 -(PubMedID : 26465154)@unknown(PubMedID : 29017446)@expressed protein -
11 Sobic.008G051000 magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed K03405: chlI, magnesium chelatase subunit I
12 Sobic.009G234600 Chorophyll a/b binding protein M9(PubMedID : 26186930)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
13 Sobic.007G116950 - -
14 Sobic.003G132100 magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed K04035: E1.14.13.81, acsF, magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
15 Sobic.002G297300 expressed protein -
16 Sobic.006G222700 OsCHL Chloroplastic lipocalin, expressed -
17 Sobic.006G264900 -(PubMedID : 29017446)@magnesium-chelatase, putative, expressed K03403: chlH, magnesium chelatase subunit H
18 Sobic.002G030200 Photosystem II subunit P(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
19 Sobic.009G091800 -(PubMedID : 29017446)@PTAC16, putative, expressed -
20 Sobic.003G197400 Protein lycopene epsilon cyclase (Os)(PubMedID : 27208977)@-(PubMedID : 29017446)@lycopene epsilon cyclase, chloroplast precursor, putative, expressed K06444: lcyE, lycopene epsilon-cyclase


Gene co-expression network
sample Sobic007G029300 Sobic007G029300 Sobic002G329600 Sobic002G329600 Sobic007G029300--Sobic002G329600 Sobic006G264201 Sobic006G264201 Sobic007G029300--Sobic006G264201 Sobic002G339200 Sobic002G339200 Sobic007G029300--Sobic002G339200 Sobic001G448400 Sobic001G448400 Sobic007G029300--Sobic001G448400 Sobic001G078000 Sobic001G078000 Sobic007G029300--Sobic001G078000 Sobic004G238500 Sobic004G238500 Sobic007G029300--Sobic004G238500 Sobic006G234100 Sobic006G234100 Sobic007G029300--Sobic006G234100 Sobic010G241000 Sobic010G241000 Sobic007G029300--Sobic010G241000 Sobic003G099400 Sobic003G099400 Sobic007G029300--Sobic003G099400 Sobic002G329600--Sobic006G264201 Sobic002G329600--Sobic002G339200 Sobic002G329600--Sobic001G078000 Sobic002G329600--Sobic010G241000 Sobic009G234600 Sobic009G234600 Sobic002G329600--Sobic009G234600 Sobic002G329600--Sobic007G029300 Sobic002G297300 Sobic002G297300 Sobic002G329600--Sobic002G297300 Sobic002G030200 Sobic002G030200 Sobic002G329600--Sobic002G030200 Sobic002G329600--Sobic001G448400 Sobic006G264201--Sobic002G329600 Sobic006G264201--Sobic002G339200 Sobic006G264201--Sobic004G238500 Sobic006G264201--Sobic009G234600 Sobic006G264201--Sobic007G029300 Sobic006G264201--Sobic010G241000 Sobic006G264201--Sobic001G078000 Sobic006G264201--Sobic001G448400 Sobic009G091800 Sobic009G091800 Sobic006G264201--Sobic009G091800 Sobic002G339200--Sobic002G329600 Sobic002G339200--Sobic006G264201 Sobic002G339200--Sobic001G078000 Sobic002G339200--Sobic006G234100 Sobic002G339200--Sobic009G234600 Sobic002G339200--Sobic010G241000 Sobic002G339200--Sobic001G448400 Sobic010G109500 Sobic010G109500 Sobic002G339200--Sobic010G109500 Sobic002G339200--Sobic007G029300 Sobic001G448400--Sobic006G234100 Sobic001G448400--Sobic002G339200 Sobic004G343300 Sobic004G343300 Sobic001G448400--Sobic004G343300 Sobic001G448400--Sobic002G329600 Sobic001G448400--Sobic010G109500 Sobic001G448400--Sobic006G264201 Sobic001G448400--Sobic007G029300 Sobic001G448400--Sobic010G241000 Sobic001G448400--Sobic001G078000 Sobic001G078000--Sobic002G329600 Sobic006G105900 Sobic006G105900 Sobic001G078000--Sobic006G105900 Sobic001G078000--Sobic002G339200 Sobic001G078000--Sobic010G241000 Sobic001G078000--Sobic009G234600 Sobic005G042000 Sobic005G042000 Sobic001G078000--Sobic005G042000 Sobic001G078000--Sobic006G264201 Sobic006G264900 Sobic006G264900 Sobic001G078000--Sobic006G264900 Sobic001G078000--Sobic007G029300 Sobic004G238500--Sobic006G264201 Sobic008G051000 Sobic008G051000 Sobic004G238500--Sobic008G051000 Sobic004G238500--Sobic002G297300 Sobic004G238500--Sobic002G329600 Sobic004G238500--Sobic009G091800 Sobic007G116950 Sobic007G116950 Sobic004G238500--Sobic007G116950 Sobic003G132100 Sobic003G132100 Sobic004G238500--Sobic003G132100 Sobic001G382100 Sobic001G382100 Sobic004G238500--Sobic001G382100 Sobic004G238500--Sobic007G029300 Sobic006G234100--Sobic010G109500 Sobic006G234100--Sobic001G448400 Sobic006G234100--Sobic002G339200 Sobic006G234100--Sobic004G343300 Sobic006G234100--Sobic010G241000 Sobic003G052500 Sobic003G052500 Sobic006G234100--Sobic003G052500 Sobic006G234100--Sobic002G329600 Sobic006G234100--Sobic001G078000 Sobic006G234100--Sobic006G264201 Sobic010G241000--Sobic009G234600 Sobic010G241000--Sobic002G329600 Sobic001G177000 Sobic001G177000 Sobic010G241000--Sobic001G177000 Sobic010G241000--Sobic003G052500 Sobic010G241000--Sobic001G078000 Sobic004G056900 Sobic004G056900 Sobic010G241000--Sobic004G056900 Sobic001G046900 Sobic001G046900 Sobic010G241000--Sobic001G046900 Sobic006G073500 Sobic006G073500 Sobic010G241000--Sobic006G073500 Sobic010G241000--Sobic002G030200 Sobic003G099400--Sobic001G382100 Sobic003G099400--Sobic007G116950 Sobic003G099400--Sobic004G238500 Sobic003G099400--Sobic008G051000 Sobic003G099400--Sobic007G029300 Sobic010G255600 Sobic010G255600 Sobic003G099400--Sobic010G255600 Sobic009G091850 Sobic009G091850 Sobic003G099400--Sobic009G091850 Sobic003G099400--Sobic006G264201 Sobic001G203000 Sobic001G203000 Sobic003G099400--Sobic001G203000
Octagon: transcription factors


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