Gene annotation
Transcriptome id Sobic.008G038300.1
Synonym GUN4, Sb08g003300
Functional annotation uncharacterized protein ycf53, putative, expressed
UniProt A0A1B6PBD4
Pfam PF05419
Panther DB PTHR34800 PTHR34800:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G59400 : enzyme binding;tetrapyrrole binding
RAP-DB (Rice) LOC_Os11g16550.1 : uncharacterized protein ycf53, putative, expressed
MaizeGDB (Corn) Zm00025a053896
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G038300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
2 Sobic.001G274600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.010G183032 - -
4 Sobic.003G209800 Chorophyll a/b binding protein 2(PubMedID : 26186930)@Protein chlorophyll a-b binding protein 2 (Os)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
5 Sobic.010G108401 - -
6 Sobic.002G000500 isoflavone reductase, putative, expressed -
7 Sobic.009G191300 photosystem II reaction center W protein, chloroplast precursor, putative, expressed K02721: photosystem II PsbW protein
8 Sobic.004G071800 - -
9 Sobic.003G199800 expressed protein -
10 Sobic.010G109500 expressed protein -
11 Sobic.006G011100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G243500 polygalacturonase, putative, expressed -
13 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
14 Sobic.001G068400 - -
15 Sobic.003G052500 Photosystem I reaction center subunit XI(PubMedID : 26186930)@Photosystem I subunit L(PubMedID : 29017446)@photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed K02699: photosystem I subunit XI
16 Sobic.004G035700 - -
17 Sobic.004G272600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
19 Sobic.001G364100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G038300 Sobic008G038300 Sobic002G040100 Sobic002G040100 Sobic008G038300--Sobic002G040100 Sobic001G274600 Sobic001G274600 Sobic008G038300--Sobic001G274600 Sobic010G183032 Sobic010G183032 Sobic008G038300--Sobic010G183032 Sobic003G209800 Sobic003G209800 Sobic008G038300--Sobic003G209800 Sobic010G108401 Sobic010G108401 Sobic008G038300--Sobic010G108401 Sobic002G000500 Sobic002G000500 Sobic008G038300--Sobic002G000500 Sobic009G191300 Sobic009G191300 Sobic008G038300--Sobic009G191300 Sobic004G071800 Sobic004G071800 Sobic008G038300--Sobic004G071800 Sobic003G199800 Sobic003G199800 Sobic008G038300--Sobic003G199800 Sobic002G040100--Sobic002G000500 Sobic002G040100--Sobic008G038300 Sobic002G040100--Sobic003G199800 Sobic010G276400 Sobic010G276400 Sobic002G040100--Sobic010G276400 Sobic001G068400 Sobic001G068400 Sobic002G040100--Sobic001G068400 Sobic010G109500 Sobic010G109500 Sobic002G040100--Sobic010G109500 Sobic010G038500 Sobic010G038500 Sobic002G040100--Sobic010G038500 Sobic002G040100--Sobic010G183032 Sobic002G040100--Sobic003G209800 Sobic001G274600--Sobic008G038300 Sobic001G274600--Sobic004G071800 Sobic001G274600--Sobic003G209800 Sobic006G011100 Sobic006G011100 Sobic001G274600--Sobic006G011100 Sobic003G052500 Sobic003G052500 Sobic001G274600--Sobic003G052500 Sobic001G274600--Sobic010G183032 Sobic001G274600--Sobic002G000500 Sobic001G274600--Sobic010G108401 Sobic006G073500 Sobic006G073500 Sobic001G274600--Sobic006G073500 Sobic010G183032--Sobic010G108401 Sobic010G183032--Sobic008G038300 Sobic004G035700 Sobic004G035700 Sobic010G183032--Sobic004G035700 Sobic010G183032--Sobic001G274600 Sobic010G183032--Sobic002G040100 Sobic001G297400 Sobic001G297400 Sobic010G183032--Sobic001G297400 Sobic010G183032--Sobic001G068400 Sobic010G183100 Sobic010G183100 Sobic010G183032--Sobic010G183100 Sobic010G183032--Sobic002G000500 Sobic003G209800--Sobic003G052500 Sobic003G209800--Sobic010G109500 Sobic003G209800--Sobic001G274600 Sobic003G209800--Sobic006G011100 Sobic003G209800--Sobic008G038300 Sobic006G234100 Sobic006G234100 Sobic003G209800--Sobic006G234100 Sobic006G105900 Sobic006G105900 Sobic003G209800--Sobic006G105900 Sobic003G209800--Sobic004G071800 Sobic003G209800--Sobic002G000500 Sobic010G108401--Sobic010G183032 Sobic010G108401--Sobic008G038300 Sobic010G108401--Sobic004G035700 Sobic010G108401--Sobic001G274600 Sobic010G108401--Sobic001G297400 Sobic010G108401--Sobic002G040100 Sobic010G108401--Sobic001G068400 Sobic010G108401--Sobic010G183100 Sobic010G108401--Sobic002G000500 Sobic002G000500--Sobic002G040100 Sobic002G000500--Sobic006G011100 Sobic002G000500--Sobic010G109500 Sobic002G000500--Sobic010G276400 Sobic002G000500--Sobic003G199800 Sobic002G000500--Sobic008G038300 Sobic007G171600 Sobic007G171600 Sobic002G000500--Sobic007G171600 Sobic002G000500--Sobic003G209800 Sobic002G000500--Sobic001G274600 Sobic009G191300--Sobic008G038300 Sobic009G191300--Sobic003G209800 Sobic009G191300--Sobic002G040100 Sobic009G191300--Sobic003G052500 Sobic004G035500 Sobic004G035500 Sobic009G191300--Sobic004G035500 Sobic003G359100 Sobic003G359100 Sobic009G191300--Sobic003G359100 Sobic009G191300--Sobic003G199800 Sobic009G191300--Sobic010G109500 Sobic001G338700 Sobic001G338700 Sobic009G191300--Sobic001G338700 Sobic004G071800--Sobic001G274600 Sobic004G071800--Sobic003G209800 Sobic004G272600 Sobic004G272600 Sobic004G071800--Sobic004G272600 Sobic004G071800--Sobic003G052500 Sobic004G071800--Sobic008G038300 Sobic004G071800--Sobic006G073500 Sobic002G064000 Sobic002G064000 Sobic004G071800--Sobic002G064000 Sobic002G033900 Sobic002G033900 Sobic004G071800--Sobic002G033900 Sobic001G070500 Sobic001G070500 Sobic004G071800--Sobic001G070500 Sobic003G199800--Sobic002G040100 Sobic003G199800--Sobic010G276400 Sobic003G199800--Sobic002G000500 Sobic003G199800--Sobic010G183100 Sobic003G199800--Sobic004G035500 Sobic003G199800--Sobic008G038300 Sobic003G199800--Sobic010G109500 Sobic007G189700 Sobic007G189700 Sobic003G199800--Sobic007G189700 Sobic003G199800--Sobic009G191300
Octagon: transcription factors


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