Gene annotation
| Transcriptome id | Sobic.008G036300.1 |
|---|---|
| Synonym | ATPAP22, PAP22, Sb08g003140 |
| Functional annotation | Ser/Thr protein phosphatase family protein, putative, expressed |
| UniProt | C5YRR5 |
| Pfam | PF00149 PF16656 |
| Panther DB | PTHR22953 PTHR22953:SF36 |
| NCBI CDD | KOG1378; Purple acid phosphatase |
| KEGG Orthology | - |
| Gene Ontology | GO:0016787; hydrolase activity |
Orthologs (automatic annotation)
| TAIR | AT3G52820 : purple acid phosphatase 22 |
|---|---|
| RAP-DB (Rice) | LOC_Os11g05400.1 : Ser/Thr protein phosphatase family protein, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQJ92255 |
| Barley | HORVU2Hr1G112330.2 , HORVU2Hr1G112330.3 , HORVU2Hr1G112330.1 , HORVU2Hr1G112330.4 , HORVU5Hr1G042160.2 , HORVU5Hr1G042160.3 , HORVU5Hr1G042160.1 |
| Wheat | TraesCS5A02G129000 , TraesCS2B02G534400 , TraesCS2B02G534400 , TraesCS5A02G129200 , TraesCS5D02G136700 , TraesCS5D02G136500 , TraesCS2A02G506000 , TraesCS2A02G506000 , TraesCS2D02G506800 , TraesCS2D02G506800 , TraesCS5B02G127800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G167500 | resistance protein, putative, expressed | - |
| 2 | Sobic.004G182700 | OsFBK8 - F-box domain and kelch repeat containing protein, expressed | - |
| 3 | Sobic.005G192600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed | - |
| 4 | Sobic.008G036350 | - | - |
| 5 | Sobic.001G198800 | -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed | - |
| 6 | Sobic.008G080400 | "cyanogenic beta-glucosidase dhurrinase, up-regulated under drought stress "(PubMedID : 24655390)@Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed | K01188: beta-glucosidase |
| 7 | Sobic.003G058001 | - | - |
| 8 | Sobic.001G338700 | tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed | - |
| 9 | Sobic.008G080600 | Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed | K01188: beta-glucosidase |
| 10 | Sobic.009G132900 | PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed | K01006: pyruvate, orthophosphate dikinase |
| 11 | Sobic.010G100200 | glyceraldehyde-3-phosphate dehydrogenase, putative, expressed | - |
| 12 | Sobic.003G131000 | expressed protein | - |
| 13 | Sobic.004G210601 | - | - |
| 14 | Sobic.005G065500 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed | - |
| 15 | Sobic.010G038500 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 16 | Sobic.005G167400 | resistance protein, putative, expressed | - |
| 17 | Sobic.003G057900 | ribosomal protein L5, putative, expressed | - |
| 18 | Sobic.007G212400 | thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed | - |
| 19 | Sobic.005G015200 | Phototropic-responsive NPH3 family protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed | - |
| 20 | Sobic.003G052500 | Photosystem I reaction center subunit XI(PubMedID : 26186930)@Photosystem I subunit L(PubMedID : 29017446)@photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed | K02699: photosystem I subunit XI |
Gene co-expression network
Octagon: transcription factors
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